| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is exeA [H]
Identifier: 78043208
GI number: 78043208
Start: 2252099
End: 2253049
Strand: Direct
Name: exeA [H]
Synonym: CHY_2519
Alternate gene names: 78043208
Gene position: 2252099-2253049 (Clockwise)
Preceding gene: 78043439
Following gene: 78043324
Centisome position: 93.78
GC content: 42.48
Gene sequence:
>951_bases GTGTATCGAGCTTTTTATTCTTTGACCAAAGCCCCTTTTACTAAAGAAATCAAAACCGCTGATTCTTTCCTGTCAACTTC TTTTTCCGAAACGATGGCCCGACTTGAGTATCTAAAAAAGACCCGTGGCATTGGCCTGATTGCTGGAGAACCAGGAGCCG GTAAAACTTTTGCTCTTCGAGCTTTTGCTGAAAGTCTCAATCCTTCTCTGTATAAGGTGCTTTATTTCCCCCTATCCACC GGTACAGTTATGGATTTCTACCGGGGGTTGGCTATAGCTCTGGGGGAAGAACCTAAGTTTCGCAAGGTGGATCTTTTTCA CCAGATTCAAACCGCTGTCCTCAGGTTTTTTCGGGAAAGAAAGATTACTCCGGTTTTTATCTTAGATGAGATGCAAATGG CTAAAGACCTTTTCCTTTGCGATATAAATATCCTCTTTAACTTTAGCATGGATTCGGAAAATCCGTTTATCTTAATTCTC TCTGGCCTTCCGCATCTCTTAGATAAGCTTTCCTTAAACCAGAATAGGCCTCTGGCCCAAAGGATTGCCATGAGCTATAA AGTTGAGCCTTTGACCCGGGAAGAGGTAGCAGGCTACATCCAGCATCAAATGGAGCTTGCCGGAGCCAAACACAGTATAT TTTCCGAACAAGCTATCGAAGCTATTGCTTCTTTATCCCGGGGGTGGCCCCGGTTAATCAATAAGCTTGCTACCCATTGC TTGCTTTATGGTTTCCAGGCTAAAAAGGAAATCATTGATGCTGAGGTGGTTAGGTTAGCGGCTTTTTGGATGCTGGTTTC TAATCTTGCCCGGTCGCACTTTTGCGGCCGGTTTTCTTTTTATTTTTCTTTGCTAAAATTCTGTGATATTTTGCAAAAGG TTTTACTGGCCTACCAAATTAATTTGCAATTTTTGCAGATTACAGCTACCTCCTATGCTATTTTATTTTGA
Upstream 100 bases:
>100_bases AGATAAAGCTATCCCGGTTAATTTCGCTGATAATGCCAAGGTAAAACGCCATCGCTCGCTTTCTTTTCAGGCTATGCTGG CGGGAAAGGAGGAGTAATCG
Downstream 100 bases:
>100_bases AATATTGGTGCCCAAATAATTTGCAAGTTCACAGAATCCCTTAATAAATAATCTGCCCGGTCAGCATCTAACTGGCTTGA AAGTAAATCCCTCCAGATAA
Product: general secretion pathway domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MYRAFYSLTKAPFTKEIKTADSFLSTSFSETMARLEYLKKTRGIGLIAGEPGAGKTFALRAFAESLNPSLYKVLYFPLST GTVMDFYRGLAIALGEEPKFRKVDLFHQIQTAVLRFFRERKITPVFILDEMQMAKDLFLCDINILFNFSMDSENPFILIL SGLPHLLDKLSLNQNRPLAQRIAMSYKVEPLTREEVAGYIQHQMELAGAKHSIFSEQAIEAIASLSRGWPRLINKLATHC LLYGFQAKKEIIDAEVVRLAAFWMLVSNLARSHFCGRFSFYFSLLKFCDILQKVLLAYQINLQFLQITATSYAILF
Sequences:
>Translated_316_residues MYRAFYSLTKAPFTKEIKTADSFLSTSFSETMARLEYLKKTRGIGLIAGEPGAGKTFALRAFAESLNPSLYKVLYFPLST GTVMDFYRGLAIALGEEPKFRKVDLFHQIQTAVLRFFRERKITPVFILDEMQMAKDLFLCDINILFNFSMDSENPFILIL SGLPHLLDKLSLNQNRPLAQRIAMSYKVEPLTREEVAGYIQHQMELAGAKHSIFSEQAIEAIASLSRGWPRLINKLATHC LLYGFQAKKEIIDAEVVRLAAFWMLVSNLARSHFCGRFSFYFSLLKFCDILQKVLLAYQINLQFLQITATSYAILF >Mature_316_residues MYRAFYSLTKAPFTKEIKTADSFLSTSFSETMARLEYLKKTRGIGLIAGEPGAGKTFALRAFAESLNPSLYKVLYFPLST GTVMDFYRGLAIALGEEPKFRKVDLFHQIQTAVLRFFRERKITPVFILDEMQMAKDLFLCDINILFNFSMDSENPFILIL SGLPHLLDKLSLNQNRPLAQRIAMSYKVEPLTREEVAGYIQHQMELAGAKHSIFSEQAIEAIASLSRGWPRLINKLATHC LLYGFQAKKEIIDAEVVRLAAFWMLVSNLARSHFCGRFSFYFSLLKFCDILQKVLLAYQINLQFLQITATSYAILF
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 36101; Mature: 36101
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRAFYSLTKAPFTKEIKTADSFLSTSFSETMARLEYLKKTRGIGLIAGEPGAGKTFALR CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH AFAESLNPSLYKVLYFPLSTGTVMDFYRGLAIALGEEPKFRKVDLFHQIQTAVLRFFRER HHHHHCCCCEEEHEEEECCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHC KITPVFILDEMQMAKDLFLCDINILFNFSMDSENPFILILSGLPHLLDKLSLNQNRPLAQ CCCEEEEEHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCHHHHHHHHCCCCCCCHHH RIAMSYKVEPLTREEVAGYIQHQMELAGAKHSIFSEQAIEAIASLSRGWPRLINKLATHC HHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLYGFQAKKEIIDAEVVRLAAFWMLVSNLARSHFCGRFSFYFSLLKFCDILQKVLLAYQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLQFLQITATSYAILF CEEEEEEEECCEEEEC >Mature Secondary Structure MYRAFYSLTKAPFTKEIKTADSFLSTSFSETMARLEYLKKTRGIGLIAGEPGAGKTFALR CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH AFAESLNPSLYKVLYFPLSTGTVMDFYRGLAIALGEEPKFRKVDLFHQIQTAVLRFFRER HHHHHCCCCEEEHEEEECCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHC KITPVFILDEMQMAKDLFLCDINILFNFSMDSENPFILILSGLPHLLDKLSLNQNRPLAQ CCCEEEEEHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCHHHHHHHHCCCCCCCHHH RIAMSYKVEPLTREEVAGYIQHQMELAGAKHSIFSEQAIEAIASLSRGWPRLINKLATHC HHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLYGFQAKKEIIDAEVVRLAAFWMLVSNLARSHFCGRFSFYFSLLKFCDILQKVLLAYQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLQFLQITATSYAILF CEEEEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]