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The map label for this gene is 78043029

Identifier: 78043029

GI number: 78043029

Start: 791704

End: 793059

Strand: Direct

Name: 78043029

Synonym: CHY_0895

Alternate gene names: NA

Gene position: 791704-793059 (Clockwise)

Preceding gene: 78044184

Following gene: 78045087

Centisome position: 32.97

GC content: 38.05

Gene sequence:

>1356_bases
GTGAGCAAAAAATTTGGGACAAGTTTAGAATTTGCCAAACGGTACGTAAGTGAAAAAACCTTGCAGCAGCTGTTAAATTA
TCTGAGTAAAGATCCAGTTAACAATTTAGATCGGATATTTACTCTGGGAAAAATTTTAGCCAGACGAGAAGAACACAAAC
AAGCAATTTTGACGGTTGAGAGAAATCTTAATAACTATCCTGCAATACGCCAATTAGTTGAAAGTTTATTACGAGACACT
CATCCCAATGTACGTCAGCGTTTGCTTTTTAACTTTTTTATAAACTCGATTATTTTCGGTATTCCAAAACAGTTACAATT
ATCCGAAACCTTAGGATTTAAAGTACCTCATACAATTTTAGTGGATCCTACAAGCAATTGTAATTTACGGTGTGAAGGTT
GCTGGGCTGGTGCATATGCCAAACATGATGAATTGGAGTATGAACGTTTGGACCGTCTTTTCAATGAAGCTAAGGAGTTA
GGAATTTACTGGATAGTAATGTCAGGTGGGGAACCCTTTATGTATCCTTATTTGTTTGACTTAGCGGCAAAACATAACGA
TATGGCTTTTATGATATATACCAATGGGACAAGAATTGATGAAAAAACTGCCGATAAAATTATAGAAGTTGGTAATATTT
CACCGGCTTTTAGTCTTGAAGGTTGGGAGGAACGAACTGATCGGCGCCGGGGAACAGGAGTATTTAAAAAAGTAATAAAT
GCAATGGAGATGTTGCGGGAAAGGGGAGCGGTTTTTGGTATTTCTCTTACGGCAACACGAGAAAATGTAGAAGAAATAAT
GTCTGATGAGTTTATTGATTATATGATAGATAAAGGAGCAAAATACGGCTGGATATTCCATTACATTCCCATTGGTCGCA
ATCCAAACACGGATTTAATGTTAACTCCTGAGCAGCGAGCCTATTTAGCAAAGGTTGTCCCTAATATCCGTAGAAATAAA
CCTATATTCCTGGCCGATTTTTGGAATGATGGCGAATTTACTCAAGGTTGCATTGCTGGAGGAAAATATTATTTCCACAT
TACTGCAAGTGGTGCTGTAGAACCGTGTGCCTTTGTTCATATTTCTACTCATAATATTAACGAATGCAGTCTTAAAGATG
TTTTAAATTCACCTTTGTTTAAAGCTTACCAAAAGAGACAACCGTTTAATAATAACCACTTAAGACCATGCCCAATTATT
GACGTACCTTCTGCCCTTAGAGAGATTGTAACTGAAACCGGGGCAAAACCTACCCATCCTGGAGCTGATGATATCTTAAA
AGGTGAAGTAAGCGAATACCTTGACCGGTTGTCTGAAGCCTGGGCAGAGGTTGCTGCCGAGATCAAGGAACGTTAA

Upstream 100 bases:

>100_bases
TAAAAAAAGGGGGGTGAGTAACCAATATAAAAGCAAGCAAATGGTTATTTTTAGTATTTAATAAAGACAACATTAAAAAA
ATACTTCGGGGGTGACTAAG

Downstream 100 bases:

>100_bases
AAATTATTTTAGCTCGAATTGATACGCCCTGAGGTTACCCAGAAAAACGTTAGAATTACTGCAATACTTTAAAATGTTTT
ATGAATTCTTGATTTGCCAA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; Radical SAM Family Protein; Heme Biosynthesis Protein; Fe-S Oxidoreductases; Radical SAM Superfamily Protein; Metallo Cofactor Biosynthesis Protein; MoaA/NirJ Family Fe-S Oxidoreductase; Radical SAM Family Fe-S Protein; Elongator /MiaB/NifB; AstB/ChuR-Related Protein; Co PQQ Synthesis Protein; MoaA/NifB/PqqE Family Protein; Co PQQ Biosynthesis Protein E; Fe-S Osidoreductase; Molybdopterin-Based TUNGsten Cofactor Biosynthesis; Pyrroloquinoline Quinone Biosynthesis Protein PqqE; Radical Sam Domain Protein; Heme D1 Biosynthesis Protein NirJ; Fe-S Oxidoreductase Of MoeA/NarA Subfamily; Heme D1 Biosynthesis Protein; Fe-S Oxidoreductase Component Of Heme Biosynthesis; Pyruvate Formate-Lyase Activating; MoeA/NarA Subfamily Fe-S Oxidoreductase; Arsenite Methyltransferase; Radical Sam

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MSKKFGTSLEFAKRYVSEKTLQQLLNYLSKDPVNNLDRIFTLGKILARREEHKQAILTVERNLNNYPAIRQLVESLLRDT
HPNVRQRLLFNFFINSIIFGIPKQLQLSETLGFKVPHTILVDPTSNCNLRCEGCWAGAYAKHDELEYERLDRLFNEAKEL
GIYWIVMSGGEPFMYPYLFDLAAKHNDMAFMIYTNGTRIDEKTADKIIEVGNISPAFSLEGWEERTDRRRGTGVFKKVIN
AMEMLRERGAVFGISLTATRENVEEIMSDEFIDYMIDKGAKYGWIFHYIPIGRNPNTDLMLTPEQRAYLAKVVPNIRRNK
PIFLADFWNDGEFTQGCIAGGKYYFHITASGAVEPCAFVHISTHNINECSLKDVLNSPLFKAYQKRQPFNNNHLRPCPII
DVPSALREIVTETGAKPTHPGADDILKGEVSEYLDRLSEAWAEVAAEIKER

Sequences:

>Translated_451_residues
MSKKFGTSLEFAKRYVSEKTLQQLLNYLSKDPVNNLDRIFTLGKILARREEHKQAILTVERNLNNYPAIRQLVESLLRDT
HPNVRQRLLFNFFINSIIFGIPKQLQLSETLGFKVPHTILVDPTSNCNLRCEGCWAGAYAKHDELEYERLDRLFNEAKEL
GIYWIVMSGGEPFMYPYLFDLAAKHNDMAFMIYTNGTRIDEKTADKIIEVGNISPAFSLEGWEERTDRRRGTGVFKKVIN
AMEMLRERGAVFGISLTATRENVEEIMSDEFIDYMIDKGAKYGWIFHYIPIGRNPNTDLMLTPEQRAYLAKVVPNIRRNK
PIFLADFWNDGEFTQGCIAGGKYYFHITASGAVEPCAFVHISTHNINECSLKDVLNSPLFKAYQKRQPFNNNHLRPCPII
DVPSALREIVTETGAKPTHPGADDILKGEVSEYLDRLSEAWAEVAAEIKER
>Mature_450_residues
SKKFGTSLEFAKRYVSEKTLQQLLNYLSKDPVNNLDRIFTLGKILARREEHKQAILTVERNLNNYPAIRQLVESLLRDTH
PNVRQRLLFNFFINSIIFGIPKQLQLSETLGFKVPHTILVDPTSNCNLRCEGCWAGAYAKHDELEYERLDRLFNEAKELG
IYWIVMSGGEPFMYPYLFDLAAKHNDMAFMIYTNGTRIDEKTADKIIEVGNISPAFSLEGWEERTDRRRGTGVFKKVINA
MEMLRERGAVFGISLTATRENVEEIMSDEFIDYMIDKGAKYGWIFHYIPIGRNPNTDLMLTPEQRAYLAKVVPNIRRNKP
IFLADFWNDGEFTQGCIAGGKYYFHITASGAVEPCAFVHISTHNINECSLKDVLNSPLFKAYQKRQPFNNNHLRPCPIID
VPSALREIVTETGAKPTHPGADDILKGEVSEYLDRLSEAWAEVAAEIKER

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51688; Mature: 51557

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKFGTSLEFAKRYVSEKTLQQLLNYLSKDPVNNLDRIFTLGKILARREEHKQAILTVE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHC
RNLNNYPAIRQLVESLLRDTHPNVRQRLLFNFFINSIIFGIPKQLQLSETLGFKVPHTIL
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCEEE
VDPTSNCNLRCEGCWAGAYAKHDELEYERLDRLFNEAKELGIYWIVMSGGEPFMYPYLFD
ECCCCCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEHHHHHH
LAAKHNDMAFMIYTNGTRIDEKTADKIIEVGNISPAFSLEGWEERTDRRRGTGVFKKVIN
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHH
AMEMLRERGAVFGISLTATRENVEEIMSDEFIDYMIDKGAKYGWIFHYIPIGRNPNTDLM
HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEE
LTPEQRAYLAKVVPNIRRNKPIFLADFWNDGEFTQGCIAGGKYYFHITASGAVEPCAFVH
ECCHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCHHHCCCCEEEEEEEECCCCCCEEEEE
ISTHNINECSLKDVLNSPLFKAYQKRQPFNNNHLRPCPIIDVPSALREIVTETGAKPTHP
EECCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
GADDILKGEVSEYLDRLSEAWAEVAAEIKER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKFGTSLEFAKRYVSEKTLQQLLNYLSKDPVNNLDRIFTLGKILARREEHKQAILTVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHC
RNLNNYPAIRQLVESLLRDTHPNVRQRLLFNFFINSIIFGIPKQLQLSETLGFKVPHTIL
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCEEE
VDPTSNCNLRCEGCWAGAYAKHDELEYERLDRLFNEAKELGIYWIVMSGGEPFMYPYLFD
ECCCCCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEHHHHHH
LAAKHNDMAFMIYTNGTRIDEKTADKIIEVGNISPAFSLEGWEERTDRRRGTGVFKKVIN
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHH
AMEMLRERGAVFGISLTATRENVEEIMSDEFIDYMIDKGAKYGWIFHYIPIGRNPNTDLM
HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEE
LTPEQRAYLAKVVPNIRRNKPIFLADFWNDGEFTQGCIAGGKYYFHITASGAVEPCAFVH
ECCHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCHHHCCCCEEEEEEEECCCCCCEEEEE
ISTHNINECSLKDVLNSPLFKAYQKRQPFNNNHLRPCPIIDVPSALREIVTETGAKPTHP
EECCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
GADDILKGEVSEYLDRLSEAWAEVAAEIKER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA