| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is cshA [H]
Identifier: 78042906
GI number: 78042906
Start: 196711
End: 198003
Strand: Direct
Name: cshA [H]
Synonym: CHY_0229
Alternate gene names: 78042906
Gene position: 196711-198003 (Clockwise)
Preceding gene: 78044344
Following gene: 78043984
Centisome position: 8.19
GC content: 48.11
Gene sequence:
>1293_bases ATGGAAGAGTTTAAAAAATTGGGATTAATCACACCGCTTTTAAAAGCGGTGAACGACCTGGGGTTTGAAATGCCTACTCC CATTCAAAAGGAGGCTATTCCACTTATTTTAGAAGGACATAACCTGGTGGGTCAGGCTCCTACCGGAACCGGAAAAACCG CTGCTTACCTTTTACCGGTGTTACAAAGAATTCAGCGGGGAAAGAAAGCTCAAGTGTTGATCGTTACTCCGACCCGGGAG CTGGCACTGCAGGTGGCCGATGAAGTGGCCAAACTCGGAAAATATCTTAAAGTCCGGGCTCTGGCGGTATACGGCGGCCA GGCTATTGAGCGGCAAATCCGGGGACTTCGCCAGGGGGTAGAAGTGATTGTGGGGACCCCGGGACGAATCTTAGACCATA TCGGCCGGAAGACTTTTCCGGCGGCAGAGATCAAAATCGTTATCCTGGACGAAGCCGATGAAATGCTGGATATGGGTTTT ATCGATGATATCGAGGCAATTTTAAATACCCTGACCAACCGCCAGCAAACCTTGCTTTTCTCGGCAACGCTGCCGGCTCC AATAAAAACCATAATTAAAAAGTTTTTAGGGGGGTATAAAACGGTTAAACTGGTTGGCAGGGAAAAAACCGTGCCGGCGA TTCGCCAGGTATATTACGAGCTTCCGGAAACGGAAAAAATCGAGGGACTTGTCAGTATCTTAAACAGCGAGCTACCCATC CAGGCTATTGTGTTTTGTCGCACCAAAAAGCGGGTTGATGAGGTAGTAGAGCAATTAAACTTTCGGGGTTATGCAGCTAA AGGATTGCACGGGGATATGAGCCAGCGGGAACGCACTCAGACCATTAAAAGCTTTAAAGCCGGGAAAACCGAACTTTTGG TGGCTACCGATGTAGCCGCCCGGGGCCTTGACATTCCCGATGTTTCCCATGTCATCAATTTCGATATTCCCCAGAACCCG GAAAGCTATATCCACCGTATTGGACGTACCGGCCGGGCGGGCAGGGAAGGAAAGGCCATTACCCTGATTAACTACCGGGA AAGAAAGCTTTTAAAAGCCATAGAAGAGGCAATAAATAAGCGCTTAAAGCGGGAAATACTGCCGGAGCCGGTGGATTTGG AAGAAGCCAGATTCAAAAAAATTGCCAAGAAAATTCTGGATACCATTACCAAAGGGGTACCGGCTTTGTATCTGGAAATG GCGGCCAGACTTTTAGAAGAGGAAGAGTCGGAGCAGCTTTTAGGGGCAACTTTGTATCTTCTGGAAGATCGGTCTTTACA GAATGATTTTTAG
Upstream 100 bases:
>100_bases GCCTTTCTGCCAAGCTGCAGAAAGGCTTTTTATGTTTTAAGCATAAATCCAGCAATTTTGCCCAAATTAAAAATGAAAAA AGGAAAAAGGAGAGTTTTTC
Downstream 100 bases:
>100_bases CGGTTATAATTGTAAAAAAATACTAACGGCCACTGGGGGTGCCGGTCAAAACCGGCTGAGAGGGAGAGTTCTCCCAACCC TTTGAACCTGATCCGGGTAA
Product: DEAD-box ATP dependent DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGKKAQVLIVTPTRE LALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGF IDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPI QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNP ESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRLKREILPEPVDLEEARFKKIAKKILDTITKGVPALYLEM AARLLEEEESEQLLGATLYLLEDRSLQNDF
Sequences:
>Translated_430_residues MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGKKAQVLIVTPTRE LALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGF IDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPI QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNP ESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRLKREILPEPVDLEEARFKKIAKKILDTITKGVPALYLEM AARLLEEEESEQLLGATLYLLEDRSLQNDF >Mature_430_residues MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGKKAQVLIVTPTRE LALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGF IDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPI QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNP ESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRLKREILPEPVDLEEARFKKIAKKILDTITKGVPALYLEM AARLLEEEESEQLLGATLYLLEDRSLQNDF
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=355, Percent_Identity=39.4366197183099, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI20149629, Length=361, Percent_Identity=38.781163434903, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI224593278, Length=429, Percent_Identity=36.1305361305361, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI164664518, Length=379, Percent_Identity=36.1477572559367, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI13129006, Length=399, Percent_Identity=37.593984962406, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI301171475, Length=358, Percent_Identity=41.0614525139665, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI87196351, Length=358, Percent_Identity=41.0614525139665, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI301171467, Length=358, Percent_Identity=41.0614525139665, Blast_Score=248, Evalue=5e-66, Organism=Homo sapiens, GI50659095, Length=422, Percent_Identity=36.0189573459716, Blast_Score=248, Evalue=9e-66, Organism=Homo sapiens, GI148613856, Length=367, Percent_Identity=38.4196185286104, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI38201710, Length=367, Percent_Identity=38.4196185286104, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=37.431693989071, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI222352149, Length=387, Percent_Identity=39.5348837209302, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI262118318, Length=374, Percent_Identity=37.9679144385027, Blast_Score=245, Evalue=6e-65, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=37.9888268156425, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI216548263, Length=374, Percent_Identity=37.9679144385027, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI31542656, Length=399, Percent_Identity=38.5964912280702, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI262231852, Length=374, Percent_Identity=37.9679144385027, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI13518015, Length=374, Percent_Identity=37.9679144385027, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI41327771, Length=391, Percent_Identity=36.0613810741688, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI83700235, Length=362, Percent_Identity=36.7403314917127, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI169881239, Length=379, Percent_Identity=38.5224274406332, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI13514809, Length=379, Percent_Identity=38.5224274406332, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI21071032, Length=384, Percent_Identity=37.2395833333333, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI45446747, Length=403, Percent_Identity=34.7394540942928, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI45446743, Length=403, Percent_Identity=34.7394540942928, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=37.1104815864023, Blast_Score=231, Evalue=9e-61, Organism=Homo sapiens, GI188035877, Length=361, Percent_Identity=36.8421052631579, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI8922886, Length=381, Percent_Identity=36.4829396325459, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI6005743, Length=381, Percent_Identity=36.745406824147, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=35.9195402298851, Blast_Score=215, Evalue=8e-56, Organism=Homo sapiens, GI21040371, Length=376, Percent_Identity=32.7127659574468, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI62241022, Length=362, Percent_Identity=37.0165745856354, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=34.0720221606648, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI164419743, Length=345, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI51094101, Length=345, Percent_Identity=33.3333333333333, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI13514831, Length=366, Percent_Identity=34.4262295081967, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI4758112, Length=376, Percent_Identity=31.6489361702128, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI18375623, Length=376, Percent_Identity=31.6489361702128, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI164419732, Length=359, Percent_Identity=35.6545961002786, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI62241024, Length=340, Percent_Identity=36.7647058823529, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI38569503, Length=360, Percent_Identity=32.2222222222222, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI38569505, Length=360, Percent_Identity=32.2222222222222, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI38327634, Length=355, Percent_Identity=33.5211267605634, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI17505907, Length=414, Percent_Identity=31.8840579710145, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI41327779, Length=373, Percent_Identity=32.4396782841823, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI256223453, Length=384, Percent_Identity=31.5104166666667, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI9506931, Length=431, Percent_Identity=30.6264501160093, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI4826686, Length=360, Percent_Identity=30.8333333333333, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI9966805, Length=302, Percent_Identity=30.794701986755, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI256773275, Length=401, Percent_Identity=28.6783042394015, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI20336298, Length=194, Percent_Identity=38.1443298969072, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI154759257, Length=429, Percent_Identity=28.4382284382284, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI87082221, Length=412, Percent_Identity=44.1747572815534, Blast_Score=345, Evalue=4e-96, Organism=Escherichia coli, GI1787016, Length=372, Percent_Identity=42.741935483871, Blast_Score=299, Evalue=3e-82, Organism=Escherichia coli, GI1787605, Length=371, Percent_Identity=39.8921832884097, Blast_Score=261, Evalue=6e-71, Organism=Escherichia coli, GI1788930, Length=382, Percent_Identity=41.8848167539267, Blast_Score=259, Evalue=2e-70, Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=35.3099730458221, Blast_Score=239, Evalue=4e-64, Organism=Escherichia coli, GI48994977, Length=352, Percent_Identity=25, Blast_Score=88, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71995724, Length=355, Percent_Identity=40.5633802816901, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI17507121, Length=355, Percent_Identity=40.2816901408451, Blast_Score=280, Evalue=8e-76, Organism=Caenorhabditis elegans, GI71987143, Length=373, Percent_Identity=38.3378016085791, Blast_Score=278, Evalue=4e-75, Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=38.8429752066116, Blast_Score=250, Evalue=9e-67, Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=35.0404312668464, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=37.3015873015873, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI115533224, Length=350, Percent_Identity=38, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI17510309, Length=380, Percent_Identity=37.1052631578947, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17510307, Length=380, Percent_Identity=37.1052631578947, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI71995514, Length=380, Percent_Identity=37.1052631578947, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI17537549, Length=388, Percent_Identity=32.7319587628866, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI17510559, Length=418, Percent_Identity=34.4497607655502, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI86570094, Length=351, Percent_Identity=36.1823361823362, Blast_Score=227, Evalue=9e-60, Organism=Caenorhabditis elegans, GI71999646, Length=344, Percent_Identity=36.3372093023256, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI71999644, Length=344, Percent_Identity=36.3372093023256, Blast_Score=224, Evalue=5e-59, Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=35.3562005277045, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI115532546, Length=374, Percent_Identity=33.4224598930481, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI115532548, Length=374, Percent_Identity=33.4224598930481, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71982858, Length=376, Percent_Identity=32.4468085106383, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507945, Length=343, Percent_Identity=37.3177842565598, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=34.1584158415842, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=34.1584158415842, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=34.4173441734417, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17509811, Length=376, Percent_Identity=32.9787234042553, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17552642, Length=355, Percent_Identity=35.2112676056338, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17536103, Length=404, Percent_Identity=34.1584158415842, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17507879, Length=368, Percent_Identity=35.5978260869565, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=32.8877005347594, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=34.6478873239437, Blast_Score=191, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17553716, Length=360, Percent_Identity=32.7777777777778, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI193206561, Length=342, Percent_Identity=32.4561403508772, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI193208216, Length=376, Percent_Identity=30.8510638297872, Blast_Score=165, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=29.7082228116711, Blast_Score=164, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17556951, Length=353, Percent_Identity=31.4447592067989, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI25148203, Length=448, Percent_Identity=28.3482142857143, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17507641, Length=422, Percent_Identity=29.1469194312796, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=29.0598290598291, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI32564046, Length=409, Percent_Identity=29.0953545232274, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI25148291, Length=405, Percent_Identity=25.4320987654321, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71982862, Length=197, Percent_Identity=34.010152284264, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25148205, Length=372, Percent_Identity=27.1505376344086, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71997889, Length=349, Percent_Identity=25.5014326647564, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17557982, Length=384, Percent_Identity=25.5208333333333, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=45.6310679611651, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71987993, Length=337, Percent_Identity=23.7388724035608, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71987997, Length=337, Percent_Identity=23.7388724035608, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI25145561, Length=358, Percent_Identity=24.8603351955307, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI32564293, Length=93, Percent_Identity=36.5591397849462, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321856, Length=406, Percent_Identity=38.1773399014778, Blast_Score=275, Evalue=8e-75, Organism=Saccharomyces cerevisiae, GI6320041, Length=395, Percent_Identity=37.7215189873418, Blast_Score=260, Evalue=4e-70, Organism=Saccharomyces cerevisiae, GI6320224, Length=377, Percent_Identity=37.1352785145889, Blast_Score=258, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=375, Percent_Identity=38.1333333333333, Blast_Score=252, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6325138, Length=370, Percent_Identity=38.3783783783784, Blast_Score=249, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6324217, Length=380, Percent_Identity=35.7894736842105, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6322427, Length=384, Percent_Identity=36.71875, Blast_Score=242, Evalue=7e-65, Organism=Saccharomyces cerevisiae, GI6322912, Length=325, Percent_Identity=39.0769230769231, Blast_Score=239, Evalue=8e-64, Organism=Saccharomyces cerevisiae, GI6322323, Length=325, Percent_Identity=39.0769230769231, Blast_Score=239, Evalue=8e-64, Organism=Saccharomyces cerevisiae, GI6321360, Length=349, Percent_Identity=37.8223495702006, Blast_Score=229, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6324620, Length=398, Percent_Identity=36.1809045226131, Blast_Score=222, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=36.4583333333333, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6323021, Length=441, Percent_Identity=31.7460317460317, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6320173, Length=417, Percent_Identity=30.6954436450839, Blast_Score=199, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=368, Percent_Identity=33.9673913043478, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6320449, Length=369, Percent_Identity=34.1463414634146, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=33.7837837837838, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=368, Percent_Identity=31.7934782608696, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6319714, Length=377, Percent_Identity=31.0344827586207, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6319618, Length=421, Percent_Identity=31.8289786223278, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320400, Length=384, Percent_Identity=32.2916666666667, Blast_Score=169, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=29.126213592233, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6321267, Length=358, Percent_Identity=31.2849162011173, Blast_Score=146, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6322876, Length=427, Percent_Identity=27.1662763466042, Blast_Score=132, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6321374, Length=439, Percent_Identity=25.0569476082005, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6324366, Length=367, Percent_Identity=27.5204359673025, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6323844, Length=365, Percent_Identity=24.9315068493151, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24645031, Length=355, Percent_Identity=38.0281690140845, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24644487, Length=380, Percent_Identity=38.1578947368421, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI45551833, Length=380, Percent_Identity=38.1578947368421, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI24644485, Length=380, Percent_Identity=38.1578947368421, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI24644483, Length=380, Percent_Identity=38.1578947368421, Blast_Score=262, Evalue=4e-70, Organism=Drosophila melanogaster, GI24644479, Length=380, Percent_Identity=38.1578947368421, Blast_Score=262, Evalue=4e-70, Organism=Drosophila melanogaster, GI281361218, Length=380, Percent_Identity=38.1578947368421, Blast_Score=261, Evalue=5e-70, Organism=Drosophila melanogaster, GI24644481, Length=380, Percent_Identity=38.1578947368421, Blast_Score=261, Evalue=5e-70, Organism=Drosophila melanogaster, GI28574962, Length=377, Percent_Identity=37.9310344827586, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI24584399, Length=363, Percent_Identity=38.8429752066116, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24585582, Length=361, Percent_Identity=39.0581717451524, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24582080, Length=357, Percent_Identity=38.9355742296919, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI24582078, Length=357, Percent_Identity=38.9355742296919, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI17136248, Length=357, Percent_Identity=38.9355742296919, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI24582075, Length=357, Percent_Identity=38.9355742296919, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI21355075, Length=384, Percent_Identity=36.4583333333333, Blast_Score=251, Evalue=5e-67, Organism=Drosophila melanogaster, GI24583281, Length=378, Percent_Identity=36.7724867724868, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24583279, Length=378, Percent_Identity=36.7724867724868, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI21356161, Length=425, Percent_Identity=36, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI17985987, Length=362, Percent_Identity=38.6740331491713, Blast_Score=241, Evalue=5e-64, Organism=Drosophila melanogaster, GI24642151, Length=350, Percent_Identity=38, Blast_Score=241, Evalue=8e-64, Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=37.5, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI24584994, Length=411, Percent_Identity=33.8199513381995, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=36.9014084507042, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=35.4748603351955, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI28575014, Length=346, Percent_Identity=33.8150289017341, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI17136814, Length=369, Percent_Identity=37.3983739837398, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24581954, Length=377, Percent_Identity=33.6870026525199, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24581952, Length=377, Percent_Identity=33.6870026525199, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24581956, Length=377, Percent_Identity=33.6870026525199, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=37.2990353697749, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI28571808, Length=354, Percent_Identity=33.6158192090396, Blast_Score=194, Evalue=7e-50, Organism=Drosophila melanogaster, GI28571809, Length=354, Percent_Identity=33.6158192090396, Blast_Score=194, Evalue=7e-50, Organism=Drosophila melanogaster, GI21355559, Length=362, Percent_Identity=34.5303867403315, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17647335, Length=352, Percent_Identity=32.9545454545455, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24666101, Length=344, Percent_Identity=29.9418604651163, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24642822, Length=387, Percent_Identity=30.4909560723514, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24640164, Length=396, Percent_Identity=28.7878787878788, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI19920478, Length=362, Percent_Identity=29.2817679558011, Blast_Score=151, Evalue=9e-37, Organism=Drosophila melanogaster, GI20130173, Length=311, Percent_Identity=29.2604501607717, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=28.8607594936709, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI17136666, Length=432, Percent_Identity=27.5462962962963, Blast_Score=144, Evalue=8e-35, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=32.5153374233129, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI18859659, Length=206, Percent_Identity=31.0679611650485, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI28571338, Length=206, Percent_Identity=31.0679611650485, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24646066, Length=377, Percent_Identity=23.342175066313, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48051; Mature: 48051
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH LQRIQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGV HHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLF EEEECCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCHHEEEE SATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPI ECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHH RGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINK CCCCCCCHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHH RLKREILPEPVDLEEARFKKIAKKILDTITKGVPALYLEMAARLLEEEESEQLLGATLYL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE LEDRSLQNDF EECCCCCCCC >Mature Secondary Structure MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH LQRIQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGV HHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLF EEEECCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCHHEEEE SATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPI ECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHH RGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINK CCCCCCCHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHH RLKREILPEPVDLEEARFKKIAKKILDTITKGVPALYLEMAARLLEEEESEQLLGATLYL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE LEDRSLQNDF EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721630 [H]