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The map label for this gene is torC [C]

Identifier: 78042881

GI number: 78042881

Start: 201552

End: 202931

Strand: Direct

Name: torC [C]

Synonym: CHY_0234

Alternate gene names: 78042881

Gene position: 201552-202931 (Clockwise)

Preceding gene: 78043469

Following gene: 78043246

Centisome position: 8.39

GC content: 47.9

Gene sequence:

>1380_bases
GTGCAAAAAAGGCTTCTTTGGATAATAATAATTGCAGCGGCAATTATAGCGATAGCAGCTCCTTTTGCTATTCACGAAAC
CAGTAAGCCGACTTTTTGCAATACCTGCCACTCGATGAAACCTTACGTGGCAGCCTGGAAAGAATCAAACCACGCAAGGG
TTGATTGCATGGCCTGCCACCGAGACCCCGGTTTTGTGGGACTGATGAAAGTTAAGCTGGGTGGGCTTAAGCAGGTGGCG
GTAGAGCTTACTGAAAAGCCATCGCCAGATGAAATTAAAGGGAAGGCAGAGGTACCCAACAGGCGGTGCGAAGCCTGTCA
TAAGTTAGATCAGATTACTGTAAACGGGACTTTTACCTTTAGCCATGAACTGCACGCCGGGAAAAAGGGATTAGCCTGTG
TAACCTGTCATGGTGGTTTGGTTCATGGTACAGAGAAAAAATTAACCATGCAGGATTGTATTGACTGTCATAAACAGAAA
AATGGTCCCACCAGCTGTGAAAGTTGCCACCAGGATAAGGCGGCTATAAAGCCGCAAAACCATGATGCCAAGTGGCTGGC
AGCTCATGGTACGGAAGCTAAAAAGGATCTGGCTGCCTGTACTACCTGTCATACCGGTGAATTGGGGCTGGAGAAGTACT
GCAATACCTGCCACAAAGGCGTGACAATGCCGCATCCGGCGAACTGGCTTAAAAACCATAAGGTTTCGGATGTAACAGTT
TGCAATACCTGCCATGCAAAACCGGTGGAAGGAGGCAAGGCCCAGACCTGTATTAGCTGTCACCAAGTAGAAATGCCGCA
CCCGGCAAACTGGACCAGTACCCATGGTAAGTTTACCCTGCAGAACAAAAACGTTAACTGCTACACCTGCCATACCAAAA
CCGAATGCAGCAGTTGCCACAAGATAGATATGCCCCATCCAGCGACGTGGCTTTCGACCCACGGAAAGACTGCGCTGGCA
AAAGGGACAAGTAGCTGTTACGGCTCCTGTCATACAAAAGCAACCTGTGACAGCTGCCATAAGGTACCGATGCCTCATAG
CAGCAGCTTTAAGACAACCACTCACGGGGCAACGGCCTTGGCAAAAGGTAGTAGTACCTGTTATACCTGCCACAGCAAAA
ATGAGTGCACGACATGCCATGCAAACGTTAAAATTCATGATAGTGGATTCTTTGCCAAACACAGCAGTGAATATGCTAAA
AATCCAGCAAAATGTAACACCTGTCACACCAACAAAACCACCTGCAACAGCTGTCACAGCAAAATTGGCCATACGGAAAC
CTGGATTACCAGACATGGTATAGCAGTAGGACAGTATGGTTCTGATTTATGTTCTACCTGCCATGACCGGGTTAAGTTCT
GCAGTAGCTGCCATCGCTAA

Upstream 100 bases:

>100_bases
TTCTTTAGCAGCAATTAGCATTAAACCCATAAAAAAGTGTTGGCATAAAAGGAATTTTGCTACTATATGTCGAATTAAAA
GAGCGAAAGGGGGTGAGACG

Downstream 100 bases:

>100_bases
AGCAAAATGGGCTTACTCCGCTTGGCAGAGTAAGCCCATATTTACATTAGTGAAAAAAGCTTTTGGTAAAATCGGATTTT
TTTTTCGTCGGTAACCGGAT

Product: NapC/NirT family cyctochrome c

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: Cytochrome C-Type Protein; NapC/NirT Cytochrome C Domain Protein; Cytochrome; Cytochrome C Family Protein

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MQKRLLWIIIIAAAIIAIAAPFAIHETSKPTFCNTCHSMKPYVAAWKESNHARVDCMACHRDPGFVGLMKVKLGGLKQVA
VELTEKPSPDEIKGKAEVPNRRCEACHKLDQITVNGTFTFSHELHAGKKGLACVTCHGGLVHGTEKKLTMQDCIDCHKQK
NGPTSCESCHQDKAAIKPQNHDAKWLAAHGTEAKKDLAACTTCHTGELGLEKYCNTCHKGVTMPHPANWLKNHKVSDVTV
CNTCHAKPVEGGKAQTCISCHQVEMPHPANWTSTHGKFTLQNKNVNCYTCHTKTECSSCHKIDMPHPATWLSTHGKTALA
KGTSSCYGSCHTKATCDSCHKVPMPHSSSFKTTTHGATALAKGSSTCYTCHSKNECTTCHANVKIHDSGFFAKHSSEYAK
NPAKCNTCHTNKTTCNSCHSKIGHTETWITRHGIAVGQYGSDLCSTCHDRVKFCSSCHR

Sequences:

>Translated_459_residues
MQKRLLWIIIIAAAIIAIAAPFAIHETSKPTFCNTCHSMKPYVAAWKESNHARVDCMACHRDPGFVGLMKVKLGGLKQVA
VELTEKPSPDEIKGKAEVPNRRCEACHKLDQITVNGTFTFSHELHAGKKGLACVTCHGGLVHGTEKKLTMQDCIDCHKQK
NGPTSCESCHQDKAAIKPQNHDAKWLAAHGTEAKKDLAACTTCHTGELGLEKYCNTCHKGVTMPHPANWLKNHKVSDVTV
CNTCHAKPVEGGKAQTCISCHQVEMPHPANWTSTHGKFTLQNKNVNCYTCHTKTECSSCHKIDMPHPATWLSTHGKTALA
KGTSSCYGSCHTKATCDSCHKVPMPHSSSFKTTTHGATALAKGSSTCYTCHSKNECTTCHANVKIHDSGFFAKHSSEYAK
NPAKCNTCHTNKTTCNSCHSKIGHTETWITRHGIAVGQYGSDLCSTCHDRVKFCSSCHR
>Mature_459_residues
MQKRLLWIIIIAAAIIAIAAPFAIHETSKPTFCNTCHSMKPYVAAWKESNHARVDCMACHRDPGFVGLMKVKLGGLKQVA
VELTEKPSPDEIKGKAEVPNRRCEACHKLDQITVNGTFTFSHELHAGKKGLACVTCHGGLVHGTEKKLTMQDCIDCHKQK
NGPTSCESCHQDKAAIKPQNHDAKWLAAHGTEAKKDLAACTTCHTGELGLEKYCNTCHKGVTMPHPANWLKNHKVSDVTV
CNTCHAKPVEGGKAQTCISCHQVEMPHPANWTSTHGKFTLQNKNVNCYTCHTKTECSSCHKIDMPHPATWLSTHGKTALA
KGTSSCYGSCHTKATCDSCHKVPMPHSSSFKTTTHGATALAKGSSTCYTCHSKNECTTCHANVKIHDSGFFAKHSSEYAK
NPAKCNTCHTNKTTCNSCHSKIGHTETWITRHGIAVGQYGSDLCSTCHDRVKFCSSCHR

Specific function: Part Of The Anaerobic Respiratory Chain Of Trimethylamine-N-Oxide Reductase Tora. Acts By Transferring Electrons From The Membranous Menaquinones To Tora. This Transfer Probably Involves An Electron Transfer Pathway From Menaquinones To The N-Terminal Dom

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50084; Mature: 50084

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
8.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRLLWIIIIAAAIIAIAAPFAIHETSKPTFCNTCHSMKPYVAAWKESNHARVDCMACH
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCHHHHHCCCCCCEEEEEEEC
RDPGFVGLMKVKLGGLKQVAVELTEKPSPDEIKGKAEVPNRRCEACHKLDQITVNGTFTF
CCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCEEEECEEEEE
SHELHAGKKGLACVTCHGGLVHGTEKKLTMQDCIDCHKQKNGPTSCESCHQDKAAIKPQN
ECHHCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC
HDAKWLAAHGTEAKKDLAACTTCHTGELGLEKYCNTCHKGVTMPHPANWLKNHKVSDVTV
CCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEE
CNTCHAKPVEGGKAQTCISCHQVEMPHPANWTSTHGKFTLQNKNVNCYTCHTKTECSSCH
ECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCC
KIDMPHPATWLSTHGKTALAKGTSSCYGSCHTKATCDSCHKVPMPHSSSFKTTTHGATAL
CCCCCCCCHHHHCCCCCHHHCCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHE
AKGSSTCYTCHSKNECTTCHANVKIHDSGFFAKHSSEYAKNPAKCNTCHTNKTTCNSCHS
ECCCCCEEEECCCCCCEEEEEEEEEECCCCEECCCHHHHCCCCCCCCCCCCCCHHHHHHH
KIGHTETWITRHGIAVGQYGSDLCSTCHDRVKFCSSCHR
HCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKRLLWIIIIAAAIIAIAAPFAIHETSKPTFCNTCHSMKPYVAAWKESNHARVDCMACH
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCHHHHHCCCCCCEEEEEEEC
RDPGFVGLMKVKLGGLKQVAVELTEKPSPDEIKGKAEVPNRRCEACHKLDQITVNGTFTF
CCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCEEEECEEEEE
SHELHAGKKGLACVTCHGGLVHGTEKKLTMQDCIDCHKQKNGPTSCESCHQDKAAIKPQN
ECHHCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC
HDAKWLAAHGTEAKKDLAACTTCHTGELGLEKYCNTCHKGVTMPHPANWLKNHKVSDVTV
CCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEE
CNTCHAKPVEGGKAQTCISCHQVEMPHPANWTSTHGKFTLQNKNVNCYTCHTKTECSSCH
ECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCC
KIDMPHPATWLSTHGKTALAKGTSSCYGSCHTKATCDSCHKVPMPHSSSFKTTTHGATAL
CCCCCCCCHHHHCCCCCHHHCCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHE
AKGSSTCYTCHSKNECTTCHANVKIHDSGFFAKHSSEYAKNPAKCNTCHTNKTTCNSCHS
ECCCCCEEEECCCCCCEEEEEEEEEECCCCEECCCHHHHCCCCCCCCCCCCCCHHHHHHH
KIGHTETWITRHGIAVGQYGSDLCSTCHDRVKFCSSCHR
HCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA