| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78042807
Identifier: 78042807
GI number: 78042807
Start: 339357
End: 339515
Strand: Direct
Name: 78042807
Synonym: CHY_0396
Alternate gene names: NA
Gene position: 339357-339515 (Clockwise)
Preceding gene: 78044875
Following gene: 78044935
Centisome position: 14.13
GC content: 45.91
Gene sequence:
>159_bases ATGGGAAGGCTAAAAGAGGCGATGAGCCGTAAGCCAGGAAACCTGCCCGTGAGAGTTAATCTGTCTTACCTTCGCGGCGA AGGGAGGGATTGTAAGGCTTTTGGTTATAATCCGCTTACCGAACCGGGAAGCGGATTTTTTACTAAATTTAACAAATAA
Upstream 100 bases:
>100_bases AGGGTTAAAAGGGAAGCCGGACGGAATTTCCGTAAACGGCGCGGGCCCGCCACTGTACTCGGGGAGCCTCTTTTAGAGAT GCCACTGTCCGTTAAATCGG
Downstream 100 bases:
>100_bases GGGGGCGAAAAAATGGTGAAAAAAAGATGGGTGGTATTTTTAGCTGTTGCCGTCATTCTGTTGGTGGCGGTAGCTCCATT ACTGGCAGGGCAAAGTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MGRLKEAMSRKPGNLPVRVNLSYLRGEGRDCKAFGYNPLTEPGSGFFTKFNK
Sequences:
>Translated_52_residues MGRLKEAMSRKPGNLPVRVNLSYLRGEGRDCKAFGYNPLTEPGSGFFTKFNK >Mature_51_residues GRLKEAMSRKPGNLPVRVNLSYLRGEGRDCKAFGYNPLTEPGSGFFTKFNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5837; Mature: 5706
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLKEAMSRKPGNLPVRVNLSYLRGEGRDCKAFGYNPLTEPGSGFFTKFNK CCCCHHHHHCCCCCCEEEEEEHEECCCCCCCEEECCCCCCCCCCCCEEECCC >Mature Secondary Structure GRLKEAMSRKPGNLPVRVNLSYLRGEGRDCKAFGYNPLTEPGSGFFTKFNK CCCHHHHHCCCCCCEEEEEEHEECCCCCCCEEECCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA