Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78042791

Identifier: 78042791

GI number: 78042791

Start: 348660

End: 348977

Strand: Direct

Name: 78042791

Synonym: CHY_0407

Alternate gene names: NA

Gene position: 348660-348977 (Clockwise)

Preceding gene: 78043172

Following gene: 78044841

Centisome position: 14.52

GC content: 42.77

Gene sequence:

>318_bases
ATGGGAATAATTATAAAAATCCTGATTTCGGCAATAGCGTTAATTGGTGTTAGCATTTTTACTCCGGGTTTTTCCGTAAA
GGGCGGCGTAATTGGGGCTGTGGTAGCTGCCTTAGTAATATCTTTCTTAAACTATTTGGCCGAAAAAATAATAGGAGAGA
AAGGAAAGGGCTTTACCGGTTTTGTGGTGGCGGTTTTAATTCTTCTCCTTGCCCGGTATATAGTTCCCCAGTACCTGCAG
GTTACTTTACCGGGAGCGATTATAGCGGCAATAATCATTGGTTTGGTGGATCGCTTTATTCCAACGACCCTGAGGTGA

Upstream 100 bases:

>100_bases
AATGCAAGAATACCTTCTTGTTTTTTTTTGCCCTTTCACACCATAAATTGTATAACATGAAAAATTATAGGAAATCCTTG
TAGAAGGAGGTGAAATATAA

Downstream 100 bases:

>100_bases
ATCATAATTTTTCGGAGGGCTTCATATATTTTTTTTACAAAAATAAAACCGGGGAGTAGCGAAAAAATGGAATACCGGGC
AAAAGCACAACGGGGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MGIIIKILISAIALIGVSIFTPGFSVKGGVIGAVVAALVISFLNYLAEKIIGEKGKGFTGFVVAVLILLLARYIVPQYLQ
VTLPGAIIAAIIIGLVDRFIPTTLR

Sequences:

>Translated_105_residues
MGIIIKILISAIALIGVSIFTPGFSVKGGVIGAVVAALVISFLNYLAEKIIGEKGKGFTGFVVAVLILLLARYIVPQYLQ
VTLPGAIIAAIIIGLVDRFIPTTLR
>Mature_104_residues
GIIIKILISAIALIGVSIFTPGFSVKGGVIGAVVAALVISFLNYLAEKIIGEKGKGFTGFVVAVLILLLARYIVPQYLQV
TLPGAIIAAIIIGLVDRFIPTTLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11008; Mature: 10877

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIIKILISAIALIGVSIFTPGFSVKGGVIGAVVAALVISFLNYLAEKIIGEKGKGFTG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FVVAVLILLLARYIVPQYLQVTLPGAIIAAIIIGLVDRFIPTTLR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GIIIKILISAIALIGVSIFTPGFSVKGGVIGAVVAALVISFLNYLAEKIIGEKGKGFTG
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FVVAVLILLLARYIVPQYLQVTLPGAIIAAIIIGLVDRFIPTTLR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA