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The map label for this gene is ydiC [H]

Identifier: 78042765

GI number: 78042765

Start: 636925

End: 637572

Strand: Direct

Name: ydiC [H]

Synonym: CHY_0723

Alternate gene names: 78042765

Gene position: 636925-637572 (Clockwise)

Preceding gene: 78043152

Following gene: 78044332

Centisome position: 26.52

GC content: 40.12

Gene sequence:

>648_bases
ATGGAGTTAGCCGTAGTTGCTGCTACCAGAAGTATTTCCCTGGCTTTACGAAAAAATGATGAGATTATTTTTGAAATAAA
TGACCGGTTAAAGGAACCCCATGCGGCAGGTTTAATGCCCTTAATTGATTTTGCGTTAAAAAGGGTTTCGGCTAAACCTC
AAGATTTAACCGCCATTTACACCGTTCTGGGACCTGGTTCCTTTACCAGTTTAAGAATTAATCTTGCTACCACTCTTGGA
TTGGCTCAAGCTCTTGGTATTCCCGTTTATGCTACCGATACTTTACGCTTAATTGCGGCCAATGCCGGAGCTTACCGGGG
GGAAGTTATGGTTTTAATGGAAGTAAACCGGGAAGAAGTATATTTTGGACTTTTTTACAATGATTTTGTGCCCAAACCAC
TGGAGCAGCTTAAAGTTATCACCTTAAAAGAAGCCCAGGAGAAAGTTTACAATTTTACCGGATTGTTAATCGGCGATGGA
GTGGAAAAGTTAGGAGAGATTCCAGAAAATTTAATCTATCTGAAAAAGGCAAGCGAACCAATAGCCAGCAATTTATTTTT
TCTGGATTTAGAGTTAGTAAATATCTTAGAGGTAAAACCGCTCTATTTAAGAAAATCTCAAGCGGAAATCGTGCGGGAGG
CAAGGTGA

Upstream 100 bases:

>100_bases
ATTTAAAAATTACCATGGAAAATATCGCAGAAGGAGAGCGGAAAATCAAAATTGAGGCTTTTGGCGAAAAGTTTAACGAA
TTAATGGAGGCGCTAATAAA

Downstream 100 bases:

>100_bases
GTTTAAAATTGGAGTTAAAACTTATGGAATTAAAAGACCTCCCTCAGGTGTTAGATATTGAAAAACTGTCTTATACAAAT
CCCTGGAGTAAGGCAAGTTT

Product: glycoprotease,-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MELAVVAATRSISLALRKNDEIIFEINDRLKEPHAAGLMPLIDFALKRVSAKPQDLTAIYTVLGPGSFTSLRINLATTLG
LAQALGIPVYATDTLRLIAANAGAYRGEVMVLMEVNREEVYFGLFYNDFVPKPLEQLKVITLKEAQEKVYNFTGLLIGDG
VEKLGEIPENLIYLKKASEPIASNLFFLDLELVNILEVKPLYLRKSQAEIVREAR

Sequences:

>Translated_215_residues
MELAVVAATRSISLALRKNDEIIFEINDRLKEPHAAGLMPLIDFALKRVSAKPQDLTAIYTVLGPGSFTSLRINLATTLG
LAQALGIPVYATDTLRLIAANAGAYRGEVMVLMEVNREEVYFGLFYNDFVPKPLEQLKVITLKEAQEKVYNFTGLLIGDG
VEKLGEIPENLIYLKKASEPIASNLFFLDLELVNILEVKPLYLRKSQAEIVREAR
>Mature_215_residues
MELAVVAATRSISLALRKNDEIIFEINDRLKEPHAAGLMPLIDFALKRVSAKPQDLTAIYTVLGPGSFTSLRINLATTLG
LAQALGIPVYATDTLRLIAANAGAYRGEVMVLMEVNREEVYFGLFYNDFVPKPLEQLKVITLKEAQEKVYNFTGLLIGDG
VEKLGEIPENLIYLKKASEPIASNLFFLDLELVNILEVKPLYLRKSQAEIVREAR

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 23908; Mature: 23908

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAVVAATRSISLALRKNDEIIFEINDRLKEPHAAGLMPLIDFALKRVSAKPQDLTAIY
CCEEEEEEECEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE
TVLGPGSFTSLRINLATTLGLAQALGIPVYATDTLRLIAANAGAYRGEVMVLMEVNREEV
EEECCCCEEEEEEEHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCEEEEEEEECCCEE
YFGLFYNDFVPKPLEQLKVITLKEAQEKVYNFTGLLIGDGVEKLGEIPENLIYLKKASEP
EEEEEECCCCCCCHHHHEEEHHHHHHHHHHHHHEEEEECCHHHHHCCCHHEEEEECCCCC
IASNLFFLDLELVNILEVKPLYLRKSQAEIVREAR
HHHCEEEEEEEEEHHHCCCHHEEECCHHHHHHCCC
>Mature Secondary Structure
MELAVVAATRSISLALRKNDEIIFEINDRLKEPHAAGLMPLIDFALKRVSAKPQDLTAIY
CCEEEEEEECEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE
TVLGPGSFTSLRINLATTLGLAQALGIPVYATDTLRLIAANAGAYRGEVMVLMEVNREEV
EEECCCCEEEEEEEHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCEEEEEEEECCCEE
YFGLFYNDFVPKPLEQLKVITLKEAQEKVYNFTGLLIGDGVEKLGEIPENLIYLKKASEP
EEEEEECCCCCCCHHHHEEEHHHHHHHHHHHHHEEEEECCHHHHHCCCHHEEEEECCCCC
IASNLFFLDLELVNILEVKPLYLRKSQAEIVREAR
HHHCEEEEEEEEEHHHCCCHHEEECCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]