| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is ilvC
Identifier: 78042750
GI number: 78042750
Start: 450178
End: 451170
Strand: Direct
Name: ilvC
Synonym: CHY_0519
Alternate gene names: 78042750
Gene position: 450178-451170 (Clockwise)
Preceding gene: 78043291
Following gene: 78043014
Centisome position: 18.75
GC content: 43.61
Gene sequence:
>993_bases ATGAAAAAAGTTTATTATGATCAGGACGCTAATTTAGAGCTTTTACGGGAGAAAAAAATTGCGATTATTGGCTACGGTAG CCAGGGGCATGCTCAGGCCCAGAACTTAAAAGATAGCGGCTTAAATGTGGTGGTAGGTCTTCATAAAAAAAGTAAAAGCC GGGAAAAAGCCGAAGCTGATGGTTTTACGGTAATGAAAGTGGATGAAGCGGCCCAGTGGGCTGATATCATTCAAATTTTG GTTCCCGACCAAATTCAGGGAGAATTATACCGGGATAAAATCGAGGAACATTTAAAACCGGGTAAGGCCTTAATGTTTTC CCACGGTTTTAACATTCATTACGGACAAATAGTGCCGCCGCCGGATGTCGATGTCTTCTTAGTTGCCCCTAAAAGTCCCG GTCACCTGGTAAGGCGGATGTATTTAGAAGGCAAAGGGGTGCCGGGTTTAATTGCCGTCTATCAGGATGCTACCGGAAAA GCCAAGGATTTAGCTTTGGCCTATGCTAAAGGTATTGGCTGCACCCGGGCGGGAGTTTTTGAAACTACTTTTAAAGAAGA AACGGAAACGGATCTTTTTGGTGAACAGGCGGTGTTATGCGGTGGGGTAACCCACTTAATTAAAGCCGGTTTTGAAACTT TAGTAGAAGCGGGCTATGCTCCGGAAATGGCTTATTTTGAATGTCTCCATGAAATGAAGTTAATTGTCGATTTAATTTAT GAAGGTGGCTTTTCGTTAATGCGGTATTCCATATCCGATACTGCCGAGTATGGTGACTACATGGTAGGTCCCCGGATTAT TACCGAAGAGACCAAAAAAGAGATGAAAAAGGTCTTGGAAGAAATTCAAAACGGAACTTTTGCCAAAAACTGGATATTAG AGAACATGGCCGGTCGTCCGGTTTATAACGCCATCAAGCGTCGGGAACAGGAACATTTAATTGAAAAGGTGGGGGCAGAA TTACGGCAGATGATGCCATGGCTGAAAAAGTAG
Upstream 100 bases:
>100_bases GGCCTTTTGGTATTAAAGAGCTGGTACGCACCGGAAAAATTGCCCTGCTGCGGGGCTCCAGAACTTCAAATATAAATGGA GTAAAGGAGGAGGAATAAAA
Downstream 100 bases:
>100_bases GGGGGATGTCTTTTGGAGATAACTGGTGCTCAGGCTTTGGTAAAAGCGTTAGAACTGGAGGGGGTAACTACTATCTTCGG TTACCCTGGAGGAGCGGTTG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKKVYYDQDANLELLREKKIAIIGYGSQGHAQAQNLKDSGLNVVVGLHKKSKSREKAEADGFTVMKVDEAAQWADIIQIL VPDQIQGELYRDKIEEHLKPGKALMFSHGFNIHYGQIVPPPDVDVFLVAPKSPGHLVRRMYLEGKGVPGLIAVYQDATGK AKDLALAYAKGIGCTRAGVFETTFKEETETDLFGEQAVLCGGVTHLIKAGFETLVEAGYAPEMAYFECLHEMKLIVDLIY EGGFSLMRYSISDTAEYGDYMVGPRIITEETKKEMKKVLEEIQNGTFAKNWILENMAGRPVYNAIKRREQEHLIEKVGAE LRQMMPWLKK
Sequences:
>Translated_330_residues MKKVYYDQDANLELLREKKIAIIGYGSQGHAQAQNLKDSGLNVVVGLHKKSKSREKAEADGFTVMKVDEAAQWADIIQIL VPDQIQGELYRDKIEEHLKPGKALMFSHGFNIHYGQIVPPPDVDVFLVAPKSPGHLVRRMYLEGKGVPGLIAVYQDATGK AKDLALAYAKGIGCTRAGVFETTFKEETETDLFGEQAVLCGGVTHLIKAGFETLVEAGYAPEMAYFECLHEMKLIVDLIY EGGFSLMRYSISDTAEYGDYMVGPRIITEETKKEMKKVLEEIQNGTFAKNWILENMAGRPVYNAIKRREQEHLIEKVGAE LRQMMPWLKK >Mature_330_residues MKKVYYDQDANLELLREKKIAIIGYGSQGHAQAQNLKDSGLNVVVGLHKKSKSREKAEADGFTVMKVDEAAQWADIIQIL VPDQIQGELYRDKIEEHLKPGKALMFSHGFNIHYGQIVPPPDVDVFLVAPKSPGHLVRRMYLEGKGVPGLIAVYQDATGK AKDLALAYAKGIGCTRAGVFETTFKEETETDLFGEQAVLCGGVTHLIKAGFETLVEAGYAPEMAYFECLHEMKLIVDLIY EGGFSLMRYSISDTAEYGDYMVGPRIITEETKKEMKKVLEEIQNGTFAKNWILENMAGRPVYNAIKRREQEHLIEKVGAE LRQMMPWLKK
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=293, Percent_Identity=36.8600682593857, Blast_Score=141, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6323387, Length=327, Percent_Identity=34.8623853211009, Blast_Score=150, Evalue=2e-37,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_CARHZ (Q3AEQ7)
Other databases:
- EMBL: CP000141 - RefSeq: YP_359377.1 - ProteinModelPortal: Q3AEQ7 - SMR: Q3AEQ7 - STRING: Q3AEQ7 - GeneID: 3726922 - GenomeReviews: CP000141_GR - KEGG: chy:CHY_0519 - NMPDR: fig|246194.3.peg.1086 - TIGR: CHY_0519 - eggNOG: COG0059 - HOGENOM: HBG286525 - OMA: AMKQCLK - ProtClustDB: PRK05479 - BioCyc: CHYD246194:CHY_0519-MONOMER - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 37048; Mature: 37048
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVYYDQDANLELLREKKIAIIGYGSQGHAQAQNLKDSGLNVVVGLHKKSKSREKAEAD CCCEEECCCCCHHHEECCCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHCC GFTVMKVDEAAQWADIIQILVPDQIQGELYRDKIEEHLKPGKALMFSHGFNIHYGQIVPP CEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCC PDVDVFLVAPKSPGHLVRRMYLEGKGVPGLIAVYQDATGKAKDLALAYAKGIGCTRAGVF CCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCH ETTFKEETETDLFGEQAVLCGGVTHLIKAGFETLVEAGYAPEMAYFECLHEMKLIVDLIY HHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGFSLMRYSISDTAEYGDYMVGPRIITEETKKEMKKVLEEIQNGTFAKNWILENMAGRP HCCHHHEEECHHHHHHHCCEECCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH VYNAIKRREQEHLIEKVGAELRQMMPWLKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKVYYDQDANLELLREKKIAIIGYGSQGHAQAQNLKDSGLNVVVGLHKKSKSREKAEAD CCCEEECCCCCHHHEECCCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHCC GFTVMKVDEAAQWADIIQILVPDQIQGELYRDKIEEHLKPGKALMFSHGFNIHYGQIVPP CEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCC PDVDVFLVAPKSPGHLVRRMYLEGKGVPGLIAVYQDATGKAKDLALAYAKGIGCTRAGVF CCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCH ETTFKEETETDLFGEQAVLCGGVTHLIKAGFETLVEAGYAPEMAYFECLHEMKLIVDLIY HHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGFSLMRYSISDTAEYGDYMVGPRIITEETKKEMKKVLEEIQNGTFAKNWILENMAGRP HCCHHHEEECHHHHHHHCCEECCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH VYNAIKRREQEHLIEKVGAELRQMMPWLKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA