Click here to switch to the map view.

The map label for this gene is cotJC2

Identifier: 78042691

GI number: 78042691

Start: 2053418

End: 2053936

Strand: Direct

Name: cotJC2

Synonym: CHY_2272

Alternate gene names: NA

Gene position: 2053418-2053936 (Clockwise)

Preceding gene: 78044691

Following gene: 78043281

Centisome position: 85.5

GC content: 38.92

Gene sequence:

>519_bases
ATGAATCACAAAAATAACGACTTTCAGCTAAACTCCCCTTATCCTCCGGTGAAGGTTAAAAATCCCAATACCATGTATGC
TGAAATTTTAATGGACGATTATGCAGGTACCGCCGGAGAACTTACCGCCATTACCCAGTACTTGTATCATCACTTTGAAA
GCGAAAAAACAAATCCGCAAATTGCTAAACTTTTTGAAGGGGTAGCCTTAGTTGAAATGCACCACCTTGAAATACTCGCA
AAGTTGATTATCGCCTTTGGCGGAAATCCTACCTATCGGGGTAGTTTTGGTAATAATTTCGCTTACTGGAGCGGACACTA
CGTTAATTATTCCCAAAATATACGGGAACAACTGATAGCCGATATTCACGCAGAAAAAACCGCAATCGTCAATTATCAGA
AGCATGCAGAAATTATTGATGATCCTTACGCCCGGCCAGTTCTCTATAGAATTATTGAAGATGAGGAATTGCATTTAAAA
TTATTTAAGGATGCCTTAAAAAGCTTAAGGGAAGGTTAA

Upstream 100 bases:

>100_bases
TCCGCCTATCCCGGTGCAATTAGCTTATAAAACCGTCTTTCCTTTATCCAAAAACCCTTTTTAACCATAAAATATTATAG
CAAGAAAAAGGAGGGATAAA

Downstream 100 bases:

>100_bases
CCCTTCCCTTTTACTTTATCGAAAAACTCCATTACCTATTTTTATTGATTTTATGAACATTTTAACTATATACCCTTAAG
TAACCTGGTTGGCAAACTTT

Product: cotJC protein

Products: NA

Alternate protein names: Catalase; CotJC Protein; Rubrerythrin; Manganese Containing Catalase Superfamily; Bacterioferritin Family Protein; Bacterioferritin; Ferretin-Like Protein; Manganese Catalase; CotJC Family Protein; Manganese-Containing Catalase; Mn-Containing Catalase

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNHKNNDFQLNSPYPPVKVKNPNTMYAEILMDDYAGTAGELTAITQYLYHHFESEKTNPQIAKLFEGVALVEMHHLEILA
KLIIAFGGNPTYRGSFGNNFAYWSGHYVNYSQNIREQLIADIHAEKTAIVNYQKHAEIIDDPYARPVLYRIIEDEELHLK
LFKDALKSLREG

Sequences:

>Translated_172_residues
MNHKNNDFQLNSPYPPVKVKNPNTMYAEILMDDYAGTAGELTAITQYLYHHFESEKTNPQIAKLFEGVALVEMHHLEILA
KLIIAFGGNPTYRGSFGNNFAYWSGHYVNYSQNIREQLIADIHAEKTAIVNYQKHAEIIDDPYARPVLYRIIEDEELHLK
LFKDALKSLREG
>Mature_172_residues
MNHKNNDFQLNSPYPPVKVKNPNTMYAEILMDDYAGTAGELTAITQYLYHHFESEKTNPQIAKLFEGVALVEMHHLEILA
KLIIAFGGNPTYRGSFGNNFAYWSGHYVNYSQNIREQLIADIHAEKTAIVNYQKHAEIIDDPYARPVLYRIIEDEELHLK
LFKDALKSLREG

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19799; Mature: 19799

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHKNNDFQLNSPYPPVKVKNPNTMYAEILMDDYAGTAGELTAITQYLYHHFESEKTNPQ
CCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHH
IAKLFEGVALVEMHHLEILAKLIIAFGGNPTYRGSFGNNFAYWSGHYVNYSQNIREQLIA
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCEEECHHHHHHHHHHH
DIHAEKTAIVNYQKHAEIIDDPYARPVLYRIIEDEELHLKLFKDALKSLREG
HHHCCHHHEECHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNHKNNDFQLNSPYPPVKVKNPNTMYAEILMDDYAGTAGELTAITQYLYHHFESEKTNPQ
CCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHH
IAKLFEGVALVEMHHLEILAKLIIAFGGNPTYRGSFGNNFAYWSGHYVNYSQNIREQLIA
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCEEECHHHHHHHHHHH
DIHAEKTAIVNYQKHAEIIDDPYARPVLYRIIEDEELHLKLFKDALKSLREG
HHHCCHHHEECHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA