| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is yjjP [C]
Identifier: 78042687
GI number: 78042687
Start: 127913
End: 128662
Strand: Direct
Name: yjjP [C]
Synonym: CHY_0151
Alternate gene names: 78042687
Gene position: 127913-128662 (Clockwise)
Preceding gene: 78043592
Following gene: 78044989
Centisome position: 5.33
GC content: 44.8
Gene sequence:
>750_bases ATGAACTACCTGGATGTTTTAAGGCTTACGGTTTTAGCCGGAGAAATAATGATTAAAAGCGGAGCGGAAATTTACCGCAC GGAAGATGTAATGGACCGGATTGCTAAAAATTACGGGGTAAAACGCGTGGAAAGCTTTGTGACTCCAACCGGCATTTTAT GCGCCATCGAAACCGACGATGGACAGGTTTTTACTACCGTTAGGCGGATAGAAAGCCGGGGTTTTAATTTAACGAAAATT GATAAAGTTAATGATTTTTCCCGCCGACTTGCCAGACGGCATATTCCTGTGGAGGAAGGCATAGCCGAACTCACTAAAGT AGCCCACGAAAAGAGTGAATATTCCTGGTGGGTAAAAGTCTTGGCAGCAGGTTTAGGGGCTTTCTTTGCGACGGGTTTAA TTGGTGGCACGGTGGTAGAAATGATTATTTCTTTGATTATTGCGTTACTGGTAAGGGGTTTTGTCATGGTAATTCCGGAC CTTGGCTTATTTCCCTTTTTCCTTGATTTAGTGGGAGGCTTTCTTTCTACTTTGCTGGTAGTAGCAATTTCTAAGTTTTA TCCCATTTCCTTAGGGGTTACCGTGGTAGGAAGTATCATGCCCTTTATTCCGGGGATGAGCATTACTAATTCCATCCGGG ATGCTATTGCCGGGGACTTCTTGGCCAGTCAGGCCCGGGGGCTTGAAGCGTTTTTAAGGGTTATTGCGTTAGCGGTAAGT GCTGCGGTGGTTTTAGCTTTTCTAACATAG
Upstream 100 bases:
>100_bases GGTGGTCAGTGGTCAGCAAAATAATAAAAAAAATCATACCTTTTTACGGCGGAAGGAGGAAATGGGAAGAAAAGAAAGAA AAAAGTAAGGGGTGAGGAAA
Downstream 100 bases:
>100_bases AAATGGGGTAGGGAAGATGAACGTTTTGTATGCTTTTTTTCTTTCTTTTACCTTTGGAATTTTATTTAATGCGCCGATGG AAAGCCTCTTTTACGGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDDGQVFTTVRRIESRGFNLTKI DKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKVLAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPD LGLFPFFLDLVGGFLSTLLVVAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS AAVVLAFLT
Sequences:
>Translated_249_residues MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDDGQVFTTVRRIESRGFNLTKI DKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKVLAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPD LGLFPFFLDLVGGFLSTLLVVAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS AAVVLAFLT >Mature_249_residues MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDDGQVFTTVRRIESRGFNLTKI DKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKVLAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPD LGLFPFFLDLVGGFLSTLLVVAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS AAVVLAFLT
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27120; Mature: 27120
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDD CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEECCC GQVFTTVRRIESRGFNLTKIDKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKV CHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPDLGLFPFFLDLVGGFLSTLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVVLAFLT HHHHHHHCC >Mature Secondary Structure MNYLDVLRLTVLAGEIMIKSGAEIYRTEDVMDRIAKNYGVKRVESFVTPTGILCAIETDD CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEECCC GQVFTTVRRIESRGFNLTKIDKVNDFSRRLARRHIPVEEGIAELTKVAHEKSEYSWWVKV CHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LAAGLGAFFATGLIGGTVVEMIISLIIALLVRGFVMVIPDLGLFPFFLDLVGGFLSTLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VAISKFYPISLGVTVVGSIMPFIPGMSITNSIRDAIAGDFLASQARGLEAFLRVIALAVS HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVVLAFLT HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA