| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465786
Identifier: 77465786
GI number: 77465786
Start: 907304
End: 909466
Strand: Reverse
Name: 77465786
Synonym: RSP_3781
Alternate gene names: NA
Gene position: 909466-907304 (Counterclockwise)
Preceding gene: 77465787
Following gene: 77465785
Centisome position: 96.44
GC content: 71.47
Gene sequence:
>2163_bases ATGGTCGAGATGCTCGACCGCGGCATCGGGCGGCTCACCCGCATTCCGCCCCTGCCGCCCTTCACCGCCCCCGAGGAGAT CCTGGCAGACGCGCTGCCGCTCCTCGATCCGCCGAGCCGGGTCACGGTGACCGAGGCGGCCGAGCGGCACATGCGCGTGC CGGTGCAGGGCAACTGGGTGCCGTTCGACCGGGCGGTGACGCCCTATACCGTCGAGCCCGCCGACATGACCCAGTCGCGC CGCTTCAAGGCCGTGGTCTTCCTCGGGCCGTCGCAGAGCGGCAAGAGCCAGATGATGCAGTCGGTCTCGGCCCATGCCGT CACCTGCGCGCCGGGCCCGGTGCAGGTCATCCACATGACCAAGACCGATGCCGACGCCTGGGTCGAGGAGAAGCTCGACC CCACGATCCTGAACAGCCCGGCGCTGCGCGAGCGCCTGGGCACCGGGCGCGACGACAGCACCTTCAGCCGCAAGCGCTTC AAGGGCATGCGGCTCACCATCGGCTATCCGGTGCCGAACCAGCTCTCGAGCCGGTCTCAGCGCCTCGTGATGCTCACCGA TTACGATCACATGCCCCAGAAGCTCGGGCCGAAGGACAGCCCGGAGGGCTCGCCCTTCGGCATGGCGCTGCAGCGGATCC GCACCTTCATGAGCCGGGGCTGCGTCCTGGCCGAGACCTCGCCCGCCTTCCCGGTGGACCCGAATGCGGACTGGGCGCCG CATGCCGGCCATCCGCACATGCTGCCGCCGGCCACGGCCGGGCTCGTGCCGATCTACAACGAGGGCACGCGCGGGCGCTG GTACTGGGAATGCCCGGACTGCGGCGATCTCTTCGAGCCGCGCTTCGACCGGCTGCATTACGATGCGGATCTCGATCCGG GCGCGGCGGGCGAGCAGGCGATGATGGAATGCCCGCACTGCGGAACGCTCATCGCCCACCGTCACAAGGTCGGCCTCAAC CGCGCCGCGCTCGAGGGTCGCGGTGGCTGGCTGCACGAGGGCCGCCACATCGAGGCGAACGGGCGCCGGGCGCTGGTCCG GATCGACGATCCCGACATCCGACGCACGCCCATCGCGAGCTACAGTCTGAACGGGGCCGCCGCGGCCTTCGCCTCGTGGG AGGAGCTGGTCCAGCGCTACGAGACCGAGCGGCGGCGGTTCGAAGCCTTGGGCGACGACACCGACTTCGCCCGGGTGCAT TACACCGACATCGGCGTGCCTTACCGGCGCCCCGAGGCCGAAGAGGAGGGCGCCCTCACGGCGGCGCAGATCCGCGAGCA CATGCGCAGTCAGGAACGGCGCGTGGCCCCGGCCTGGACGCGCTTCGTCACGGTCTCGATCGACGTGCAGGGCAACCGCT TCGAGGTGCTGGTCATGGCCTGGGGCGCGCAGGGCGAGCGGATGCCGATCGACCGGTTCGCGGTGGCGCAGCCTCCCGAC CATGCCCCGCGCGCGAAGGGTGACGACGAGCGATACCGGGCGCTCGACCCCGGCCGCTATGTCGAGGATGCCGATGCGCT CCTCGATCTGCCCGAGCGTCTCTATCCGGTGGAGGGGGCGAGCTGGAGCCTGAAGCCCTGCGCGCTGGTGATCGACTTCA ACGGCCCGGCCGGCTGGTCGGACAATGCCGAGAAGTTCTGGCGCGCGCGCCGGCGCAACGGTCAGGGCGGGCTCTGGTGG CTCTCGATCGGCCGCGGGGGCTTTCAGCAGCGCGACCGGGTCTGGCACGAGGCGCCCGAGCGGGGCTCGAAGGGCAGGCG CGCGCGCGGCATCAAGCTGCTGAACATGGCGACCGACCGGATGAAGGAGAGCGTCCTCGCGGCCGTCGGCCGGTTCGAGG GCGGTCAGGGCGCCCAGCATGTGCCCTCCTGGCTCGAGGCGGAGCATCTCGACGAGCTCCTCGCCGAGCGCCGGGGCGCC AAGGGCTACGAGAAGCGCCAGGGCGCTGTCCGCAACGAGACGCTCGATCTCTCGGTGCAGGCGCTGGCCGTAGCGGAGTT CAAGGGGCTGAACCGGATCGACTGGCAGGCGCCGCCCGCCTGGGCCGAGGCGGGGCCCGCCAACCCGTTCGCCGTGGCCG TGTCCGCAGCTGCGGCAGAGGCCGCACCGGCCCCGCGCCGGCGCGCGCGGACCTCGCGCTCGCGATACATGGAGGGATCA TGA
Upstream 100 bases:
>100_bases GCGATGCGGCCCGGATCGACGCGCGGGCGCGGATCGAGGCCGCGCTCCTGCGGCCCGGCGAGGTCGTGGCCATGGGCGCG CAGAAGGCGCTCGATCTCTG
Downstream 100 bases:
>100_bases CGCTCGACGATATGGAGCGGCGGCTCACGGGGCTGCTCGACATCCGCCACCGGGGCGTGCGGTCGGGCTCGGTCGGGTCC GAACGGGTGGAGTATCAGAG
Product: putative phage terminase large subunit
Products: NA
Alternate protein names: Terminase GpA; Phage Terminase Large Subunit; Bacteriophage Tail Assembly Protein; DNA Packaging Protein Of Prophage; DNA Packaging Protein Of Putative Prophage; Phage-Related Terminase Large Subunit; Bacteriophage Terminase Large Subunit; Terminase Large Subunit
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MVEMLDRGIGRLTRIPPLPPFTAPEEILADALPLLDPPSRVTVTEAAERHMRVPVQGNWVPFDRAVTPYTVEPADMTQSR RFKAVVFLGPSQSGKSQMMQSVSAHAVTCAPGPVQVIHMTKTDADAWVEEKLDPTILNSPALRERLGTGRDDSTFSRKRF KGMRLTIGYPVPNQLSSRSQRLVMLTDYDHMPQKLGPKDSPEGSPFGMALQRIRTFMSRGCVLAETSPAFPVDPNADWAP HAGHPHMLPPATAGLVPIYNEGTRGRWYWECPDCGDLFEPRFDRLHYDADLDPGAAGEQAMMECPHCGTLIAHRHKVGLN RAALEGRGGWLHEGRHIEANGRRALVRIDDPDIRRTPIASYSLNGAAAAFASWEELVQRYETERRRFEALGDDTDFARVH YTDIGVPYRRPEAEEEGALTAAQIREHMRSQERRVAPAWTRFVTVSIDVQGNRFEVLVMAWGAQGERMPIDRFAVAQPPD HAPRAKGDDERYRALDPGRYVEDADALLDLPERLYPVEGASWSLKPCALVIDFNGPAGWSDNAEKFWRARRRNGQGGLWW LSIGRGGFQQRDRVWHEAPERGSKGRRARGIKLLNMATDRMKESVLAAVGRFEGGQGAQHVPSWLEAEHLDELLAERRGA KGYEKRQGAVRNETLDLSVQALAVAEFKGLNRIDWQAPPAWAEAGPANPFAVAVSAAAAEAAPAPRRRARTSRSRYMEGS
Sequences:
>Translated_720_residues MVEMLDRGIGRLTRIPPLPPFTAPEEILADALPLLDPPSRVTVTEAAERHMRVPVQGNWVPFDRAVTPYTVEPADMTQSR RFKAVVFLGPSQSGKSQMMQSVSAHAVTCAPGPVQVIHMTKTDADAWVEEKLDPTILNSPALRERLGTGRDDSTFSRKRF KGMRLTIGYPVPNQLSSRSQRLVMLTDYDHMPQKLGPKDSPEGSPFGMALQRIRTFMSRGCVLAETSPAFPVDPNADWAP HAGHPHMLPPATAGLVPIYNEGTRGRWYWECPDCGDLFEPRFDRLHYDADLDPGAAGEQAMMECPHCGTLIAHRHKVGLN RAALEGRGGWLHEGRHIEANGRRALVRIDDPDIRRTPIASYSLNGAAAAFASWEELVQRYETERRRFEALGDDTDFARVH YTDIGVPYRRPEAEEEGALTAAQIREHMRSQERRVAPAWTRFVTVSIDVQGNRFEVLVMAWGAQGERMPIDRFAVAQPPD HAPRAKGDDERYRALDPGRYVEDADALLDLPERLYPVEGASWSLKPCALVIDFNGPAGWSDNAEKFWRARRRNGQGGLWW LSIGRGGFQQRDRVWHEAPERGSKGRRARGIKLLNMATDRMKESVLAAVGRFEGGQGAQHVPSWLEAEHLDELLAERRGA KGYEKRQGAVRNETLDLSVQALAVAEFKGLNRIDWQAPPAWAEAGPANPFAVAVSAAAAEAAPAPRRRARTSRSRYMEGS >Mature_720_residues MVEMLDRGIGRLTRIPPLPPFTAPEEILADALPLLDPPSRVTVTEAAERHMRVPVQGNWVPFDRAVTPYTVEPADMTQSR RFKAVVFLGPSQSGKSQMMQSVSAHAVTCAPGPVQVIHMTKTDADAWVEEKLDPTILNSPALRERLGTGRDDSTFSRKRF KGMRLTIGYPVPNQLSSRSQRLVMLTDYDHMPQKLGPKDSPEGSPFGMALQRIRTFMSRGCVLAETSPAFPVDPNADWAP HAGHPHMLPPATAGLVPIYNEGTRGRWYWECPDCGDLFEPRFDRLHYDADLDPGAAGEQAMMECPHCGTLIAHRHKVGLN RAALEGRGGWLHEGRHIEANGRRALVRIDDPDIRRTPIASYSLNGAAAAFASWEELVQRYETERRRFEALGDDTDFARVH YTDIGVPYRRPEAEEEGALTAAQIREHMRSQERRVAPAWTRFVTVSIDVQGNRFEVLVMAWGAQGERMPIDRFAVAQPPD HAPRAKGDDERYRALDPGRYVEDADALLDLPERLYPVEGASWSLKPCALVIDFNGPAGWSDNAEKFWRARRRNGQGGLWW LSIGRGGFQQRDRVWHEAPERGSKGRRARGIKLLNMATDRMKESVLAAVGRFEGGQGAQHVPSWLEAEHLDELLAERRGA KGYEKRQGAVRNETLDLSVQALAVAEFKGLNRIDWQAPPAWAEAGPANPFAVAVSAAAAEAAPAPRRRARTSRSRYMEGS
Specific function: Unknown
COG id: COG5525
COG function: function code R; Bacteriophage tail assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80226; Mature: 80226
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEMLDRGIGRLTRIPPLPPFTAPEEILADALPLLDPPSRVTVTEAAERHMRVPVQGNWV CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHEECCCCCCEE PFDRAVTPYTVEPADMTQSRRFKAVVFLGPSQSGKSQMMQSVSAHAVTCAPGPVQVIHMT CCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCEEEECCCCEEEEEEE KTDADAWVEEKLDPTILNSPALRERLGTGRDDSTFSRKRFKGMRLTIGYPVPNQLSSRSQ CCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCCHHHHCCCC RLVMLTDYDHMPQKLGPKDSPEGSPFGMALQRIRTFMSRGCVLAETSPAFPVDPNADWAP EEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCC HAGHPHMLPPATAGLVPIYNEGTRGRWYWECPDCGDLFEPRFDRLHYDADLDPGAAGEQA CCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCHHHHEEECCCCCCCCCCCHH MMECPHCGTLIAHRHKVGLNRAALEGRGGWLHEGRHIEANGRRALVRIDDPDIRRTPIAS HHCCCCCCHHHHHHHHCCCCHHEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCC YSLNGAAAAFASWEELVQRYETERRRFEALGDDTDFARVHYTDIGVPYRRPEAEEEGALT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEE AAQIREHMRSQERRVAPAWTRFVTVSIDVQGNRFEVLVMAWGAQGERMPIDRFAVAQPPD HHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCHHHEECCCCCC HAPRAKGDDERYRALDPGRYVEDADALLDLPERLYPVEGASWSLKPCALVIDFNGPAGWS CCCCCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCC DNAEKFWRARRRNGQGGLWWLSIGRGGFQQRDRVWHEAPERGSKGRRARGIKLLNMATDR CCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHCCEEEEHHHHHH MKESVLAAVGRFEGGQGAQHVPSWLEAEHLDELLAERRGAKGYEKRQGAVRNETLDLSVQ HHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEHH ALAVAEFKGLNRIDWQAPPAWAEAGPANPFAVAVSAAAAEAAPAPRRRARTSRSRYMEGS HHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MVEMLDRGIGRLTRIPPLPPFTAPEEILADALPLLDPPSRVTVTEAAERHMRVPVQGNWV CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHEECCCCCCEE PFDRAVTPYTVEPADMTQSRRFKAVVFLGPSQSGKSQMMQSVSAHAVTCAPGPVQVIHMT CCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCEEEECCCCEEEEEEE KTDADAWVEEKLDPTILNSPALRERLGTGRDDSTFSRKRFKGMRLTIGYPVPNQLSSRSQ CCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCCHHHHCCCC RLVMLTDYDHMPQKLGPKDSPEGSPFGMALQRIRTFMSRGCVLAETSPAFPVDPNADWAP EEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCC HAGHPHMLPPATAGLVPIYNEGTRGRWYWECPDCGDLFEPRFDRLHYDADLDPGAAGEQA CCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCHHHHEEECCCCCCCCCCCHH MMECPHCGTLIAHRHKVGLNRAALEGRGGWLHEGRHIEANGRRALVRIDDPDIRRTPIAS HHCCCCCCHHHHHHHHCCCCHHEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCC YSLNGAAAAFASWEELVQRYETERRRFEALGDDTDFARVHYTDIGVPYRRPEAEEEGALT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEE AAQIREHMRSQERRVAPAWTRFVTVSIDVQGNRFEVLVMAWGAQGERMPIDRFAVAQPPD HHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCHHHEECCCCCC HAPRAKGDDERYRALDPGRYVEDADALLDLPERLYPVEGASWSLKPCALVIDFNGPAGWS CCCCCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCC DNAEKFWRARRRNGQGGLWWLSIGRGGFQQRDRVWHEAPERGSKGRRARGIKLLNMATDR CCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHCCEEEEHHHHHH MKESVLAAVGRFEGGQGAQHVPSWLEAEHLDELLAERRGAKGYEKRQGAVRNETLDLSVQ HHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEHH ALAVAEFKGLNRIDWQAPPAWAEAGPANPFAVAVSAAAAEAAPAPRRRARTSRSRYMEGS HHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA