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The map label for this gene is gvpJ [H]

Identifier: 77465580

GI number: 77465580

Start: 674703

End: 675017

Strand: Reverse

Name: gvpJ [H]

Synonym: RSP_3580

Alternate gene names: 77465580

Gene position: 675017-674703 (Counterclockwise)

Preceding gene: 77465581

Following gene: 77465579

Centisome position: 71.58

GC content: 65.71

Gene sequence:

>315_bases
ATGAGCTTTCAGATGCAGAGCCCGCTCCAGCAGGACAGTCTGGCCGACGTCCTCGAGCGGATCCTCGACAAGGGGATCGT
GATTGCCGGCGACATTTCGATCTCGCTGGTGGGGATCGAGCTCCTGACGATCCGCCTGCGCCTTCTGGTCGCCACCGTCG
ACAAGGCGCGGGAGATGGGGATCAACTGGTGGGAGAGCGATCCTCGCCTCTGCATCACGCAGGCGCCTGCCTCCGACGGT
TCGGCCGCCCTGCTGGACCGGCTCGAGCGGATCGAGACCCAGATCGGGCAACTGGCCGCAGCACGCGAGGGATGA

Upstream 100 bases:

>100_bases
ACGACCTGCTCTGTGCCTACGAGATCCGGGTGACGCCGCAGGGCCGCGTCGGCGGCTTCCAGCGCCTCGGGCGCTACCAC
CGCGAGGAGGGCGCGCCGTC

Downstream 100 bases:

>100_bases
GATGAGCGACGAGAAGAAGCCGGGCCCCGGCAGGACGACCGCTGACATCGAGCTGAGGTTCGGCCGCCTCCTCAGCGCGC
TCGGCAGCGCCCTTTCCGAC

Product: gas vesicle protein GVPa

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSFQMQSPLQQDSLADVLERILDKGIVIAGDISISLVGIELLTIRLRLLVATVDKAREMGINWWESDPRLCITQAPASDG
SAALLDRLERIETQIGQLAAAREG

Sequences:

>Translated_104_residues
MSFQMQSPLQQDSLADVLERILDKGIVIAGDISISLVGIELLTIRLRLLVATVDKAREMGINWWESDPRLCITQAPASDG
SAALLDRLERIETQIGQLAAAREG
>Mature_103_residues
SFQMQSPLQQDSLADVLERILDKGIVIAGDISISLVGIELLTIRLRLLVATVDKAREMGINWWESDPRLCITQAPASDGS
AALLDRLERIETQIGQLAAAREG

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 11387; Mature: 11256

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00234 GAS_VESICLE_A_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQMQSPLQQDSLADVLERILDKGIVIAGDISISLVGIELLTIRLRLLVATVDKAREMG
CCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC
INWWESDPRLCITQAPASDGSAALLDRLERIETQIGQLAAAREG
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFQMQSPLQQDSLADVLERILDKGIVIAGDISISLVGIELLTIRLRLLVATVDKAREMG
CCCCCCCCCCCHHHHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC
INWWESDPRLCITQAPASDGSAALLDRLERIETQIGQLAAAREG
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]