| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465579
Identifier: 77465579
GI number: 77465579
Start: 674168
End: 674701
Strand: Reverse
Name: 77465579
Synonym: RSP_3579
Alternate gene names: NA
Gene position: 674701-674168 (Counterclockwise)
Preceding gene: 77465580
Following gene: 77465578
Centisome position: 71.55
GC content: 69.85
Gene sequence:
>534_bases ATGAGCGACGAGAAGAAGCCGGGCCCCGGCAGGACGACCGCTGACATCGAGCTGAGGTTCGGCCGCCTCCTCAGCGCGCT CGGCAGCGCCCTTTCCGACATGACAGGTCGCCTCGAGTCGGGCCAGAGCAGGGAGATCCGGCGGGACCACACGATCGACG TCGGGATGGGCCCGATCCGCACCGAGACGCGCATCCGCGTGCGGTACGCCTCCGACTTCGGCAACGCGGAACCCGAACCG GGCCCGGTGCCTGAGGAGACCGCCGAGAGACCACCTGCGCCCGCGCGGCCCATTCTGGCGGACATCGCGACGGTGGGCCG GACGTGGCAGCTTCAGGCGGATTTACCTGGTGTTGCCGAGGAGGACCTCACTCTGGAGCTCGACGCAGGCGATCTCCTGA TTTCGGCCGAAGGGAGCGGCCGGCGTTACGAGGGGCGGTTCCCCCTCCCGCCCGGCGTCGGGCTCGCCGACATCCGGATC TCGCTCAAGAGCGGCATCCTTGACCTGACCGCCCCGCTTCCGGAGGCGCCATGA
Upstream 100 bases:
>100_bases ACGCAGGCGCCTGCCTCCGACGGTTCGGCCGCCCTGCTGGACCGGCTCGAGCGGATCGAGACCCAGATCGGGCAACTGGC CGCAGCACGCGAGGGATGAG
Downstream 100 bases:
>100_bases TCTATCTCTACGGCCTGCTCGAGGAACCCGCCTCCGGCCACGAGGTGCTTGCCGGCATGGCGGGGGTCACGGGGCCCATC GCACTCGCGAGGCTTCCAGG
Product: heat shock protein Hsp20
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSDEKKPGPGRTTADIELRFGRLLSALGSALSDMTGRLESGQSREIRRDHTIDVGMGPIRTETRIRVRYASDFGNAEPEP GPVPEETAERPPAPARPILADIATVGRTWQLQADLPGVAEEDLTLELDAGDLLISAEGSGRRYEGRFPLPPGVGLADIRI SLKSGILDLTAPLPEAP
Sequences:
>Translated_177_residues MSDEKKPGPGRTTADIELRFGRLLSALGSALSDMTGRLESGQSREIRRDHTIDVGMGPIRTETRIRVRYASDFGNAEPEP GPVPEETAERPPAPARPILADIATVGRTWQLQADLPGVAEEDLTLELDAGDLLISAEGSGRRYEGRFPLPPGVGLADIRI SLKSGILDLTAPLPEAP >Mature_176_residues SDEKKPGPGRTTADIELRFGRLLSALGSALSDMTGRLESGQSREIRRDHTIDVGMGPIRTETRIRVRYASDFGNAEPEPG PVPEETAERPPAPARPILADIATVGRTWQLQADLPGVAEEDLTLELDAGDLLISAEGSGRRYEGRFPLPPGVGLADIRIS LKSGILDLTAPLPEAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18973; Mature: 18841
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEKKPGPGRTTADIELRFGRLLSALGSALSDMTGRLESGQSREIRRDHTIDVGMGPIR CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCC TETRIRVRYASDFGNAEPEPGPVPEETAERPPAPARPILADIATVGRTWQLQADLPGVAE CCEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCC EDLTLELDAGDLLISAEGSGRRYEGRFPLPPGVGLADIRISLKSGILDLTAPLPEAP CCEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCC >Mature Secondary Structure SDEKKPGPGRTTADIELRFGRLLSALGSALSDMTGRLESGQSREIRRDHTIDVGMGPIR CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCC TETRIRVRYASDFGNAEPEPGPVPEETAERPPAPARPILADIATVGRTWQLQADLPGVAE CCEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCC EDLTLELDAGDLLISAEGSGRRYEGRFPLPPGVGLADIRISLKSGILDLTAPLPEAP CCEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA