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The map label for this gene is med [H]

Identifier: 77465559

GI number: 77465559

Start: 655153

End: 656247

Strand: Direct

Name: med [H]

Synonym: RSP_3560

Alternate gene names: 77465559

Gene position: 655153-656247 (Clockwise)

Preceding gene: 77465558

Following gene: 77465560

Centisome position: 69.47

GC content: 65.11

Gene sequence:

>1095_bases
ATGGATCGCAGAACGCTTCTCGCGAGCGCCGCCTCGGGACTCGCGCTGTCGCTGGCGGGAGGCCGGGTCGCGATGGCCCA
GGCCAAGGACAAGGTGAAGGTGGGCTTCGTCTATGTCGGCCCGATCGGGGATGGCGGCTGGAGCTTCCAGCACAACGAGG
GCCGGCTGGCCGTCGAGAAGGAATTCGGCGACCGGGTCGAGACGATCTATCAGGAAAGCGTGCCCGAGGGCTCCGACGCC
GAGCGCGTGCTGACCCAGATGGCGCTGTCGGGCTGCGACATCATCTTCACCACCTCCTTCGGCTACATGGATGCGACGAA
CAATGTCGCGGCCAAGTTCCCGAACGTGAAGTTCGAACATTGCACCGGCTTCAAGCGCGAGCATCCGAACGTCGCCACCT
ACAACGCCCGCTTCTACGAGGGCCGCGCGGTCTGCGGCACCATCGCCGGCCTGATGACCAAGTCGAACAAGATCGGCTAC
ATCGGCTCCTATCCGATCCCCGAGGTAATCCAGGGCATCAACTCCTCGTTCATCCATGCGCGGAAGGTGAACCCGGACGT
CTCCATCTCGGTCGTCTGGGCCTACACCTGGTTCGATCCGGCCAAGGAAGCGGATGCGGCCAAGGCGCTCATCGAGCAGG
GCATGGACGTGATCCTCGCCCACACCGATTCGACCGCGCCGCTGGCCGAGGCCGCCAAGACGCCGGGCGTGATCGGCTTC
GGTCAGGCCTCGGACATGGCCAACTACAAGCCCTCGCCGCGGGTCTCGTCGATCATCGACAACTGGGCGCCCTACTACGT
CAAGCGCGTGGGCATGGTGCTCGACGGCACCTGGGAGAGCACGGACGCCTGGGAAGGCATCGGCGGCGGCGAGGTGCTGA
TCGGCGAAATCACCGAGGCCGTTCCGGCCGAGGTGAAGGCCAAGGCGATGGAAGTTCACGATGCCATCGGGGCGGGCACC
TATCATCCCTTCACCGGCCCGCTCAACAAGCAGGACGGCTCGGCGTGGCTCGCGGAGGGCGAGACGGCGGCGGACACGGA
TCTTCTCGGCATGAACTTCTATGTCGAGGGCATCTCGGGCGAGATCCCGAAGTAA

Upstream 100 bases:

>100_bases
CGCAGCACGGCGGCACCGGCCTCGCTGGGCAAGACCTTCCACGCCTCGCGCTGAGGCAGCTATCGGCCGGCAGCGTCCGG
CAGGAACAGGGAGCTAAAGA

Downstream 100 bases:

>100_bases
GCCCTGCCCCATTCGTTCAAGAGGCCCGGGCCGGAACGGCCCGGGCCTCTGGCCATTCTGGACGCGCTTTCGTCGCTTCT
CCGGGCAGGAGCCTCCGAGT

Product: ABC transporter periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MDRRTLLASAASGLALSLAGGRVAMAQAKDKVKVGFVYVGPIGDGGWSFQHNEGRLAVEKEFGDRVETIYQESVPEGSDA
ERVLTQMALSGCDIIFTTSFGYMDATNNVAAKFPNVKFEHCTGFKREHPNVATYNARFYEGRAVCGTIAGLMTKSNKIGY
IGSYPIPEVIQGINSSFIHARKVNPDVSISVVWAYTWFDPAKEADAAKALIEQGMDVILAHTDSTAPLAEAAKTPGVIGF
GQASDMANYKPSPRVSSIIDNWAPYYVKRVGMVLDGTWESTDAWEGIGGGEVLIGEITEAVPAEVKAKAMEVHDAIGAGT
YHPFTGPLNKQDGSAWLAEGETAADTDLLGMNFYVEGISGEIPK

Sequences:

>Translated_364_residues
MDRRTLLASAASGLALSLAGGRVAMAQAKDKVKVGFVYVGPIGDGGWSFQHNEGRLAVEKEFGDRVETIYQESVPEGSDA
ERVLTQMALSGCDIIFTTSFGYMDATNNVAAKFPNVKFEHCTGFKREHPNVATYNARFYEGRAVCGTIAGLMTKSNKIGY
IGSYPIPEVIQGINSSFIHARKVNPDVSISVVWAYTWFDPAKEADAAKALIEQGMDVILAHTDSTAPLAEAAKTPGVIGF
GQASDMANYKPSPRVSSIIDNWAPYYVKRVGMVLDGTWESTDAWEGIGGGEVLIGEITEAVPAEVKAKAMEVHDAIGAGT
YHPFTGPLNKQDGSAWLAEGETAADTDLLGMNFYVEGISGEIPK
>Mature_364_residues
MDRRTLLASAASGLALSLAGGRVAMAQAKDKVKVGFVYVGPIGDGGWSFQHNEGRLAVEKEFGDRVETIYQESVPEGSDA
ERVLTQMALSGCDIIFTTSFGYMDATNNVAAKFPNVKFEHCTGFKREHPNVATYNARFYEGRAVCGTIAGLMTKSNKIGY
IGSYPIPEVIQGINSSFIHARKVNPDVSISVVWAYTWFDPAKEADAAKALIEQGMDVILAHTDSTAPLAEAAKTPGVIGF
GQASDMANYKPSPRVSSIIDNWAPYYVKRVGMVLDGTWESTDAWEGIGGGEVLIGEITEAVPAEVKAKAMEVHDAIGAGT
YHPFTGPLNKQDGSAWLAEGETAADTDLLGMNFYVEGISGEIPK

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38989; Mature: 38989

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRTLLASAASGLALSLAGGRVAMAQAKDKVKVGFVYVGPIGDGGWSFQHNEGRLAVEK
CCCHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEEEEEECCCCCCCCEECCCCCEEEEH
EFGDRVETIYQESVPEGSDAERVLTQMALSGCDIIFTTSFGYMDATNNVAAKFPNVKFEH
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCHHCCCCCCEEHH
CTGFKREHPNVATYNARFYEGRAVCGTIAGLMTKSNKIGYIGSYPIPEVIQGINSSFIHA
CCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHCCCCEEEE
RKVNPDVSISVVWAYTWFDPAKEADAAKALIEQGMDVILAHTDSTAPLAEAAKTPGVIGF
EECCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCEEEE
GQASDMANYKPSPRVSSIIDNWAPYYVKRVGMVLDGTWESTDAWEGIGGGEVLIGEITEA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCEEEEHHHHH
VPAEVKAKAMEVHDAIGAGTYHPFTGPLNKQDGSAWLAEGETAADTDLLGMNFYVEGISG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEECCCC
EIPK
CCCC
>Mature Secondary Structure
MDRRTLLASAASGLALSLAGGRVAMAQAKDKVKVGFVYVGPIGDGGWSFQHNEGRLAVEK
CCCHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEEEEEECCCCCCCCEECCCCCEEEEH
EFGDRVETIYQESVPEGSDAERVLTQMALSGCDIIFTTSFGYMDATNNVAAKFPNVKFEH
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCHHCCCCCCEEHH
CTGFKREHPNVATYNARFYEGRAVCGTIAGLMTKSNKIGYIGSYPIPEVIQGINSSFIHA
CCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHCCCCEEEE
RKVNPDVSISVVWAYTWFDPAKEADAAKALIEQGMDVILAHTDSTAPLAEAAKTPGVIGF
EECCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCEEEE
GQASDMANYKPSPRVSSIIDNWAPYYVKRVGMVLDGTWESTDAWEGIGGGEVLIGEITEA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCEEEEHHHHH
VPAEVKAKAMEVHDAIGAGTYHPFTGPLNKQDGSAWLAEGETAADTDLLGMNFYVEGISG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEECCCC
EIPK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]