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The map label for this gene is 77465486

Identifier: 77465486

GI number: 77465486

Start: 555297

End: 556625

Strand: Direct

Name: 77465486

Synonym: RSP_3485

Alternate gene names: NA

Gene position: 555297-556625 (Clockwise)

Preceding gene: 77465485

Following gene: 77465487

Centisome position: 58.89

GC content: 73.51

Gene sequence:

>1329_bases
ATGAGCGGCAACAGGGTGGTCTGGTCGGAAGGGCTCTTCCTCAGGACCCAGCACTTCCAGCAGCAGGACCGGCACGCGGA
GGCGCTGCTGCGCGCGGCGCTCCTTGCCGCGCCCTGGCAGCCCTTCGGCTTCACCCGGCTCGCGCTCGATGCGGCGGCGC
TCGACGCAGGCCGCGTGGCGCTCGCCGAGGCGGAGGCGCTGATGCCGGACGGCACGGCCTTCCGCCTGACCGAGGCCGAG
CCGCCGCCGGCCGCGGCGCTCCGCCGCGACGGGCCGCCGGGCCTCGTCCAGCTGGCGCTGCCGCTCGAGCAGGAGGGGGC
GGCGAGTGTCGATCCCGCCCATGCCGCACCCTCGGGTGCGCGCTACCGGGGCCGGATCGAGGTGCTGCGCGATGCGATCC
GCGGCGGCGCCGAGCCCGAGGAGGTGGAGCTCGCGCGGCTCGCCCCGCGGCTGATCGCGCCGGGAGAGCCCGCGGACGGC
TGCGTGACGCTGCCCGTGGCGCGCGTCGAGGGGCTGCGCGCGGACGGATCCGTGGCCCTGCAGGAGGGATGGCTGCCCCC
TGCCCTCACCATCGGCGCCGTGCCCTGGTATGGCGCGCTGCTTCAGGAGCTGGTGACGGGGCTCGACCGGGTGGCCGATG
CCCATGGCGGGCTCGTGCTGGGCGGCGCCGGGCGCTCGATCGAGAACCTGCTGATCCTCGAACTGGCCAACACCGCGCGC
CCGCGCCTTGCCCACCTGCTCCAGCAGGCGCAGGAACATCCATCGGCGCTCTATGCCGAGCTGGCCGCGCTCGCCGGGCG
GATGGCGACCTACGGCTCCTCCTCGCGCCGGCTGAGCGCGCTTGCGCCCTACGACCATCTCGAGCCACAGCCGGCCTTCG
CGGCGCTGGCCGACACGCTGCGTTCGCTTCTTCTGTCGCTGCGCCATGTCGAGCCGAAGTCGCGGGCGCTGCCGGTGGCG
CGCCACGCGCAGAACATCTGGAAGGTCCGCATCGACAATCCCGAGATCCTGCGCTCCTCGCGCATCGTGCTGCGCGTGGG
CTCGGAGATGTCGGACGAGAGCCTGCGCCGGCTCTTCGCCGATCAGGCGACGGTGGGCGCGGCCGATGCCTTCGAGCGGC
TCTGGACCTCGCGCCTGCCGGGCATCCCGCTGAAGCCGCTCCATTCCCAGCCGCGCGAGATCCCCTACGACGGCGAGCGG
CTCTGCCTCGAGCTCGACCAGAAATCCGAGCACTGGTCGCAACTCCTCGAGGCGCCGGGCTTCGTGGTGGGGGTTTCGGG
CGTGCTCGAGCGCGAGCCGCAGATCGATTGCTATGCGGTGAGCCGATGA

Upstream 100 bases:

>100_bases
GCTACCGCTACAGCTTCAGCGTCGCGCCCACCGCCGAGGTGGCGCTGAAGATCGACGTGGGCCAGGGGGGCCTCGTCGTG
GTGCAGGGCTGAGGCGCGCC

Downstream 100 bases:

>100_bases
CCCGCGCAGGCGCCTCCGGCTGGGCATGTCCGCCGTTGGGCGCGGGGCGCCGGGGGACGGGACCATGACGCGGGAGGACG
ATCCGTTCGGTCTGGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Protein ImpJ; Type VI Secretion System Protein ImpJ; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSGNRVVWSEGLFLRTQHFQQQDRHAEALLRAALLAAPWQPFGFTRLALDAAALDAGRVALAEAEALMPDGTAFRLTEAE
PPPAAALRRDGPPGLVQLALPLEQEGAASVDPAHAAPSGARYRGRIEVLRDAIRGGAEPEEVELARLAPRLIAPGEPADG
CVTLPVARVEGLRADGSVALQEGWLPPALTIGAVPWYGALLQELVTGLDRVADAHGGLVLGGAGRSIENLLILELANTAR
PRLAHLLQQAQEHPSALYAELAALAGRMATYGSSSRRLSALAPYDHLEPQPAFAALADTLRSLLLSLRHVEPKSRALPVA
RHAQNIWKVRIDNPEILRSSRIVLRVGSEMSDESLRRLFADQATVGAADAFERLWTSRLPGIPLKPLHSQPREIPYDGER
LCLELDQKSEHWSQLLEAPGFVVGVSGVLEREPQIDCYAVSR

Sequences:

>Translated_442_residues
MSGNRVVWSEGLFLRTQHFQQQDRHAEALLRAALLAAPWQPFGFTRLALDAAALDAGRVALAEAEALMPDGTAFRLTEAE
PPPAAALRRDGPPGLVQLALPLEQEGAASVDPAHAAPSGARYRGRIEVLRDAIRGGAEPEEVELARLAPRLIAPGEPADG
CVTLPVARVEGLRADGSVALQEGWLPPALTIGAVPWYGALLQELVTGLDRVADAHGGLVLGGAGRSIENLLILELANTAR
PRLAHLLQQAQEHPSALYAELAALAGRMATYGSSSRRLSALAPYDHLEPQPAFAALADTLRSLLLSLRHVEPKSRALPVA
RHAQNIWKVRIDNPEILRSSRIVLRVGSEMSDESLRRLFADQATVGAADAFERLWTSRLPGIPLKPLHSQPREIPYDGER
LCLELDQKSEHWSQLLEAPGFVVGVSGVLEREPQIDCYAVSR
>Mature_441_residues
SGNRVVWSEGLFLRTQHFQQQDRHAEALLRAALLAAPWQPFGFTRLALDAAALDAGRVALAEAEALMPDGTAFRLTEAEP
PPAAALRRDGPPGLVQLALPLEQEGAASVDPAHAAPSGARYRGRIEVLRDAIRGGAEPEEVELARLAPRLIAPGEPADGC
VTLPVARVEGLRADGSVALQEGWLPPALTIGAVPWYGALLQELVTGLDRVADAHGGLVLGGAGRSIENLLILELANTARP
RLAHLLQQAQEHPSALYAELAALAGRMATYGSSSRRLSALAPYDHLEPQPAFAALADTLRSLLLSLRHVEPKSRALPVAR
HAQNIWKVRIDNPEILRSSRIVLRVGSEMSDESLRRLFADQATVGAADAFERLWTSRLPGIPLKPLHSQPREIPYDGERL
CLELDQKSEHWSQLLEAPGFVVGVSGVLEREPQIDCYAVSR

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47727; Mature: 47596

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNRVVWSEGLFLRTQHFQQQDRHAEALLRAALLAAPWQPFGFTRLALDAAALDAGRVA
CCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCH
LAEAEALMPDGTAFRLTEAEPPPAAALRRDGPPGLVQLALPLEQEGAASVDPAHAAPSGA
HHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
RYRGRIEVLRDAIRGGAEPEEVELARLAPRLIAPGEPADGCVTLPVARVEGLRADGSVAL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCCCCCEEE
QEGWLPPALTIGAVPWYGALLQELVTGLDRVADAHGGLVLGGAGRSIENLLILELANTAR
ECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHEEEEEECCCCC
PRLAHLLQQAQEHPSALYAELAALAGRMATYGSSSRRLSALAPYDHLEPQPAFAALADTL
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
RSLLLSLRHVEPKSRALPVARHAQNIWKVRIDNPEILRSSRIVLRVGSEMSDESLRRLFA
HHHHHHHHCCCCHHHCCCHHHHHCCEEEEEECCHHHHHCCEEEEEECCCCCHHHHHHHHH
DQATVGAADAFERLWTSRLPGIPLKPLHSQPREIPYDGERLCLELDQKSEHWSQLLEAPG
HHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCC
FVVGVSGVLEREPQIDCYAVSR
EEEECCHHHCCCCCCCEEEECC
>Mature Secondary Structure 
SGNRVVWSEGLFLRTQHFQQQDRHAEALLRAALLAAPWQPFGFTRLALDAAALDAGRVA
CCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCH
LAEAEALMPDGTAFRLTEAEPPPAAALRRDGPPGLVQLALPLEQEGAASVDPAHAAPSGA
HHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
RYRGRIEVLRDAIRGGAEPEEVELARLAPRLIAPGEPADGCVTLPVARVEGLRADGSVAL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCCCCCEEE
QEGWLPPALTIGAVPWYGALLQELVTGLDRVADAHGGLVLGGAGRSIENLLILELANTAR
ECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHEEEEEECCCCC
PRLAHLLQQAQEHPSALYAELAALAGRMATYGSSSRRLSALAPYDHLEPQPAFAALADTL
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
RSLLLSLRHVEPKSRALPVARHAQNIWKVRIDNPEILRSSRIVLRVGSEMSDESLRRLFA
HHHHHHHHCCCCHHHCCCHHHHHCCEEEEEECCHHHHHCCEEEEEECCCCCHHHHHHHHH
DQATVGAADAFERLWTSRLPGIPLKPLHSQPREIPYDGERLCLELDQKSEHWSQLLEAPG
HHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCC
FVVGVSGVLEREPQIDCYAVSR
EEEECCHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA