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The map label for this gene is 77465482

Identifier: 77465482

GI number: 77465482

Start: 550793

End: 552658

Strand: Direct

Name: 77465482

Synonym: RSP_3481

Alternate gene names: NA

Gene position: 550793-552658 (Clockwise)

Preceding gene: 77465481

Following gene: 77465483

Centisome position: 58.41

GC content: 73.9

Gene sequence:

>1866_bases
ATGGACCGCGCCTTCCTCGCCTATTACGAGGCAGAGCTCGCCGAGCTGCGCGAGGCGGCGGCCGCGTTCGGCACCCTGCA
TCCGACGGTGGGGCGCAACCTCTCGCTCGATACGGTGCCCTGCCCGGACCCCTATGTGGAACGGCTGCTCGAAGGGGTGG
CCTGGCTCGCGGCAAGGACCCGGCTCAAGCTCGACGCCGAGGCGCAGCGCAGCGTGCGCAACCTGCTCGACTGGCTCTGG
CCCGATCTCGCCGGGCCTGCGCCGGCCATGGCGCTCGCCACCCTTCACCCGGGGCCGCAGGTGCTGGGGATGGCGGACGG
CCACACGGTGAGGCGCGGCACCCGCCTCGTCGCGGCCTTCCGCGAGGGGCTGGCCACGCGCGCCACCTACACGACCGCGC
AGGACGTGACCCTCTGGCCGGTGACCCTCGAGGCGGCGGGATACCTGCCCGACCGCGGCGCCTTGAAGGCCGCGGGGCTC
TCCGAGGCGATGGCGGGGGGCGCCGAGGCGGCCATCCGCCTCGCCCTCGCGCGCGCAGGGCCGGGCACGCTCTCCGAGCT
GTCGCTCGACCGGCTCGACCTCTGTTTCGCGGGCAGTCCGCGCGCGCCCGCGCTGTTCGACGCGATCCACGGCACCTGTC
GGCGGGCGGCGGCCCGCGGCGCGGCGGATTTCGAGCGGGTGCCGGCCCCCGCCCTCGTCGGCATCGACGGGGCGGAGGGA
CTGCTGCCGCGCCTGCGCCCCTCCTTCGAGGGCTACCGGCTGATCCGCGAATATTTCCTGATGCCGGATCGGTTCCACTA
CCTGCGCCTCGACGGGCTGCAGACAGCCATCCGCGCGGCGACGGGACGGGTCGAGATCCTGTTGCTCCTCGACCGTCCGC
GGCCGGCGCTGGCGGACGTCGCGGCGTCGGACTTCCGGCTGTTCGTGACGCCCGTGGTCAATCTCTTCGAGAAGGAATGC
AATGCGGTCGAGGTCGATCCCCGCTCGGCCGCGCATGTCGTGCACCCGGACCGCACAAGGCCGCGCGACTTCGAGATCCT
GCGCCTGCTGCGGGTCGAGGATGCCGACAGCTCCGGCCCCGAGGCGGTGATCGAGCCCCTGCATGCGCCCGCGGCCCAGG
GGGGCTTGGGTCTTTTCTATACCACCGAGCGCCGCCCCCGCCGCCCCGGCGAGGACGAGCTGCGCCGGGGGCAGACCCGG
ACGAGCCACGCGGGCGACGATCTTTACATCTCGCTCGTGCGGCGTCCGGGCGCGACGGCGCCTGCCGTCCGGCGGCTCGA
CATCCGCGCGCTCTGCACCAACCGCGACCTGCCGATCCTCGACGACAGCCCGCGCCTCACGCTCGAAAGCGGCGATCCGG
TGGCGCGGGTCGAGCTTCTGTCGGCGCTCCGCCGCCCCCGTCCCGCGCTGGCCGCCGGGCTGCCGCGCATGACCCGCGAA
GCGGAGGCGCAGCAGGACGAGGTCATCTGGCGCCTCGCCGCGCAGCTCTCGCTCGATCATCTGTCGCTCGCCGAGACGAC
CGACGACGCCGAACCGCTGCGCGCGCTGCTCGCGCTCTATGCCGACCGCGGCGACCCGGCCGTGGCCCGCCATGCGCGGT
CCATCGCCCGGGTGCGGGCGCGCGCCGTGACCGAGCGGCTGGATCTGCCCGGCCCGCTCTGCTTCGGCCGCGGACAGGAG
GTGACGCTCGAAGTCGACGAGACGGTGCTGAGCGGGGCGAGCACGCTTCTTCTGTCCGCGCTGCTCGCGCAGCTCTTCGC
GCGGCAGGCGGCGATCAACGCGGTCGTCCGGCTGCGCACGCGGCTGGTTCAGGCACAGGAGGAGGTGACATGGCCGACGA
TCCCCGGCATCCGCCCCCCGATCTGA

Upstream 100 bases:

>100_bases
AGGGGGTGCTGATGCTCGCCCCCGTACCCGAGCGGTTGCGGCTGTCAACCATGCTCGACCTCGATACCGGCAGCGCCTCG
ACCGCGCTCGAGGAGGCGTG

Downstream 100 bases:

>100_bases
GCCCCGCCACGGGCTTCTTCGAGCTGCTGCGCCGGCTGGAGGCGCCGGAACTCCGCTTCGGCCGCACCGGCCCCGAGCCC
GCGCGGCTCGGCCAGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: T6ss C; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion System; Type VI Secretion Protein Family; Type VI Secretion System Core Protein; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MDRAFLAYYEAELAELREAAAAFGTLHPTVGRNLSLDTVPCPDPYVERLLEGVAWLAARTRLKLDAEAQRSVRNLLDWLW
PDLAGPAPAMALATLHPGPQVLGMADGHTVRRGTRLVAAFREGLATRATYTTAQDVTLWPVTLEAAGYLPDRGALKAAGL
SEAMAGGAEAAIRLALARAGPGTLSELSLDRLDLCFAGSPRAPALFDAIHGTCRRAAARGAADFERVPAPALVGIDGAEG
LLPRLRPSFEGYRLIREYFLMPDRFHYLRLDGLQTAIRAATGRVEILLLLDRPRPALADVAASDFRLFVTPVVNLFEKEC
NAVEVDPRSAAHVVHPDRTRPRDFEILRLLRVEDADSSGPEAVIEPLHAPAAQGGLGLFYTTERRPRRPGEDELRRGQTR
TSHAGDDLYISLVRRPGATAPAVRRLDIRALCTNRDLPILDDSPRLTLESGDPVARVELLSALRRPRPALAAGLPRMTRE
AEAQQDEVIWRLAAQLSLDHLSLAETTDDAEPLRALLALYADRGDPAVARHARSIARVRARAVTERLDLPGPLCFGRGQE
VTLEVDETVLSGASTLLLSALLAQLFARQAAINAVVRLRTRLVQAQEEVTWPTIPGIRPPI

Sequences:

>Translated_621_residues
MDRAFLAYYEAELAELREAAAAFGTLHPTVGRNLSLDTVPCPDPYVERLLEGVAWLAARTRLKLDAEAQRSVRNLLDWLW
PDLAGPAPAMALATLHPGPQVLGMADGHTVRRGTRLVAAFREGLATRATYTTAQDVTLWPVTLEAAGYLPDRGALKAAGL
SEAMAGGAEAAIRLALARAGPGTLSELSLDRLDLCFAGSPRAPALFDAIHGTCRRAAARGAADFERVPAPALVGIDGAEG
LLPRLRPSFEGYRLIREYFLMPDRFHYLRLDGLQTAIRAATGRVEILLLLDRPRPALADVAASDFRLFVTPVVNLFEKEC
NAVEVDPRSAAHVVHPDRTRPRDFEILRLLRVEDADSSGPEAVIEPLHAPAAQGGLGLFYTTERRPRRPGEDELRRGQTR
TSHAGDDLYISLVRRPGATAPAVRRLDIRALCTNRDLPILDDSPRLTLESGDPVARVELLSALRRPRPALAAGLPRMTRE
AEAQQDEVIWRLAAQLSLDHLSLAETTDDAEPLRALLALYADRGDPAVARHARSIARVRARAVTERLDLPGPLCFGRGQE
VTLEVDETVLSGASTLLLSALLAQLFARQAAINAVVRLRTRLVQAQEEVTWPTIPGIRPPI
>Mature_621_residues
MDRAFLAYYEAELAELREAAAAFGTLHPTVGRNLSLDTVPCPDPYVERLLEGVAWLAARTRLKLDAEAQRSVRNLLDWLW
PDLAGPAPAMALATLHPGPQVLGMADGHTVRRGTRLVAAFREGLATRATYTTAQDVTLWPVTLEAAGYLPDRGALKAAGL
SEAMAGGAEAAIRLALARAGPGTLSELSLDRLDLCFAGSPRAPALFDAIHGTCRRAAARGAADFERVPAPALVGIDGAEG
LLPRLRPSFEGYRLIREYFLMPDRFHYLRLDGLQTAIRAATGRVEILLLLDRPRPALADVAASDFRLFVTPVVNLFEKEC
NAVEVDPRSAAHVVHPDRTRPRDFEILRLLRVEDADSSGPEAVIEPLHAPAAQGGLGLFYTTERRPRRPGEDELRRGQTR
TSHAGDDLYISLVRRPGATAPAVRRLDIRALCTNRDLPILDDSPRLTLESGDPVARVELLSALRRPRPALAAGLPRMTRE
AEAQQDEVIWRLAAQLSLDHLSLAETTDDAEPLRALLALYADRGDPAVARHARSIARVRARAVTERLDLPGPLCFGRGQE
VTLEVDETVLSGASTLLLSALLAQLFARQAAINAVVRLRTRLVQAQEEVTWPTIPGIRPPI

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67634; Mature: 67634

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRAFLAYYEAELAELREAAAAFGTLHPTVGRNLSLDTVPCPDPYVERLLEGVAWLAART
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RLKLDAEAQRSVRNLLDWLWPDLAGPAPAMALATLHPGPQVLGMADGHTVRRGTRLVAAF
HEEECHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCEEEECCCCHHHHHHHHHHHH
REGLATRATYTTAQDVTLWPVTLEAAGYLPDRGALKAAGLSEAMAGGAEAAIRLALARAG
HHCHHHHCEECCCCCCEEEEEEEECCCCCCCCCCCHHCCHHHHHCCCHHHHHHHHHHCCC
PGTLSELSLDRLDLCFAGSPRAPALFDAIHGTCRRAAARGAADFERVPAPALVGIDGAEG
CCCHHHHCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEECCCCCC
LLPRLRPSFEGYRLIREYFLMPDRFHYLRLDGLQTAIRAATGRVEILLLLDRPRPALADV
CCHHCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCEEEEEEECCCCCHHHHH
AASDFRLFVTPVVNLFEKECNAVEVDPRSAAHVVHPDRTRPRDFEILRLLRVEDADSSGP
HHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
EAVIEPLHAPAAQGGLGLFYTTERRPRRPGEDELRRGQTRTSHAGDDLYISLVRRPGATA
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCC
PAVRRLDIRALCTNRDLPILDDSPRLTLESGDPVARVELLSALRRPRPALAAGLPRMTRE
CHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHH
AEAQQDEVIWRLAAQLSLDHLSLAETTDDAEPLRALLALYADRGDPAVARHARSIARVRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RAVTERLDLPGPLCFGRGQEVTLEVDETVLSGASTLLLSALLAQLFARQAAINAVVRLRT
HHHHHHCCCCCCEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLVQAQEEVTWPTIPGIRPPI
HHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDRAFLAYYEAELAELREAAAAFGTLHPTVGRNLSLDTVPCPDPYVERLLEGVAWLAART
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RLKLDAEAQRSVRNLLDWLWPDLAGPAPAMALATLHPGPQVLGMADGHTVRRGTRLVAAF
HEEECHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCEEEECCCCHHHHHHHHHHHH
REGLATRATYTTAQDVTLWPVTLEAAGYLPDRGALKAAGLSEAMAGGAEAAIRLALARAG
HHCHHHHCEECCCCCCEEEEEEEECCCCCCCCCCCHHCCHHHHHCCCHHHHHHHHHHCCC
PGTLSELSLDRLDLCFAGSPRAPALFDAIHGTCRRAAARGAADFERVPAPALVGIDGAEG
CCCHHHHCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEECCCCCC
LLPRLRPSFEGYRLIREYFLMPDRFHYLRLDGLQTAIRAATGRVEILLLLDRPRPALADV
CCHHCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCEEEEEEECCCCCHHHHH
AASDFRLFVTPVVNLFEKECNAVEVDPRSAAHVVHPDRTRPRDFEILRLLRVEDADSSGP
HHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
EAVIEPLHAPAAQGGLGLFYTTERRPRRPGEDELRRGQTRTSHAGDDLYISLVRRPGATA
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCC
PAVRRLDIRALCTNRDLPILDDSPRLTLESGDPVARVELLSALRRPRPALAAGLPRMTRE
CHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHH
AEAQQDEVIWRLAAQLSLDHLSLAETTDDAEPLRALLALYADRGDPAVARHARSIARVRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RAVTERLDLPGPLCFGRGQEVTLEVDETVLSGASTLLLSALLAQLFARQAAINAVVRLRT
HHHHHHCCCCCCEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLVQAQEEVTWPTIPGIRPPI
HHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA