| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465440
Identifier: 77465440
GI number: 77465440
Start: 508932
End: 509357
Strand: Direct
Name: 77465440
Synonym: RSP_3438
Alternate gene names: NA
Gene position: 508932-509357 (Clockwise)
Preceding gene: 77465439
Following gene: 77465441
Centisome position: 53.97
GC content: 73.71
Gene sequence:
>426_bases ATGACGGCCGCCCTGTCCCAGCCGATCCCGCAGGGCGACTACATTCCGGCCCGCCGGGCAGGGGCGCTGATCTTCACCTC GGGCATGACGCCCCGCCGCGAGGGGGTGCTCCAGTTCACCGGCCCCGTGCGCCGCGACCAGCCGCTCGAAGAGCAGCGCG AGGCCGTCCGGCTTGCCTGCGAGAATGCGCTGGCGGCCGCGCGCGGCCTTCTGGCCGAGGGCGAGAGCCTTTCGCTGATC CTCTCGCTCACCGTCTATGTCGCGGCCGAGCCCGGCTTCGAGGCGCATTCGAAGCTCGCCGATTTCGCCTCGGCGCGGCT GCGCGAGGAGCTGGGGCCCGCGGGCATCGGCGCCCGCGCCGCGGTCGGCGTGGCGACCCTCCCCGGCAATGCCCCCGTCG AGATCCAGCTCATCGCCTCCGTCTGA
Upstream 100 bases:
>100_bases CGCACACGGCCGACAGCGTGCGGCTGAACTTCAGCCAGGATCACGAGGCCGCCGTCGCCGCCGCCCGGCGGATCGTGACG CTGGTCGAGCGGTATCGCGC
Downstream 100 bases:
>100_bases CAGAACCCGGGCCGGTCCGGCCCTCCAGCCCCTCGGAACGCTCCCCAGATGACCAGCTCCCGCCTCTCCTCCCGCCTTCA GGCCGTGCAGCCCTCGCCCA
Product: translation initiation inhibitor
Products: NA
Alternate protein names: Translation Initiation Inhibitor
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTAALSQPIPQGDYIPARRAGALIFTSGMTPRREGVLQFTGPVRRDQPLEEQREAVRLACENALAAARGLLAEGESLSLI LSLTVYVAAEPGFEAHSKLADFASARLREELGPAGIGARAAVGVATLPGNAPVEIQLIASV
Sequences:
>Translated_141_residues MTAALSQPIPQGDYIPARRAGALIFTSGMTPRREGVLQFTGPVRRDQPLEEQREAVRLACENALAAARGLLAEGESLSLI LSLTVYVAAEPGFEAHSKLADFASARLREELGPAGIGARAAVGVATLPGNAPVEIQLIASV >Mature_140_residues TAALSQPIPQGDYIPARRAGALIFTSGMTPRREGVLQFTGPVRRDQPLEEQREAVRLACENALAAARGLLAEGESLSLIL SLTVYVAAEPGFEAHSKLADFASARLREELGPAGIGARAAVGVATLPGNAPVEIQLIASV
Specific function: Unknown
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14731; Mature: 14600
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAALSQPIPQGDYIPARRAGALIFTSGMTPRREGVLQFTGPVRRDQPLEEQREAVRLAC CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH ENALAAARGLLAEGESLSLILSLTVYVAAEPGFEAHSKLADFASARLREELGPAGIGARA HHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH AVGVATLPGNAPVEIQLIASV HEEEEECCCCCCEEEEEEECC >Mature Secondary Structure TAALSQPIPQGDYIPARRAGALIFTSGMTPRREGVLQFTGPVRRDQPLEEQREAVRLAC CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH ENALAAARGLLAEGESLSLILSLTVYVAAEPGFEAHSKLADFASARLREELGPAGIGARA HHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH AVGVATLPGNAPVEIQLIASV HEEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA