| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is dam [C]
Identifier: 77465361
GI number: 77465361
Start: 423689
End: 424477
Strand: Direct
Name: dam [C]
Synonym: RSP_3360
Alternate gene names: 77465361
Gene position: 423689-424477 (Clockwise)
Preceding gene: 77465360
Following gene: 77465362
Centisome position: 44.93
GC content: 68.19
Gene sequence:
>789_bases GTGGCGCCCTGGATCGGCGGCAAGCGCAACCTCGCCCGCCGGATCTGCGCCATCCTCGACCGCAGCCCCTGCCTCACCTA TGCCGAGCCCTTCGTCGGCATGGCCGGGATCTTCCTGCGCCGCAGCTCGCGCCCCCGGGCCGAGGTCATCAACGACCGCG GCCGCGACGTGGCGAACCTGTTCCGCATTCTGCAACGGCATTATCCGCAGTTCCTCGACACGCTGCGTTTCCAGCTGACC ACGCGGGCCGAATTCGAGCGTCTGGGCGCCACCGATCCCGACACGCTGACCGACCTCGAACGGGCGGCGCGGTTCCTCTA CCTCCAGCGCACCGCCTTCGGCGGCAAGGTGAGCGGGCGGAACTTCGGCGTCTCCTCGCATCGGCCTGGGCGGTTCAACC TCACCACGCTGGAGCCCATGCTCGAGGACCTGCACAGCCGCCTCGCCGGCGTGATCGTCGAATGCCTGGACTGGGCCGAC TTCCTCGCCCGCTACGACCGGCCCGAGACGCTCTTCTATCTCGACCCGCCGTACTGGGGATCCGAGACCGACTACGGCCG CGGCCTGTTCCAGCGCGAGGACTTCGGGCTGATGGCCGAGCGGCTGGCCAAGTTGCAGGGCCGCTTCCTCCTCTCGATCA ACGATGTGCCCCAGATCCGCGCGATCTTCGGCAGGTTCCGGATCACTGAGGTGACGACCACCTATTCGATCAGCGGCAGC GCGAAGGGCAATGGCACGGCGCGGCCGGAGCTGCTGGTCTCGAACTGGGACATCGGCGAAGAGGGCTGA
Upstream 100 bases:
>100_bases CCAGACAAGAATCATGGCCGCTCCCGCACCCTTGCGGGCACGCCGAAGAGACACGAACCAGATGAAGAGTCCACTCTCGC CCGTCACCCCGCTGCAGCCT
Downstream 100 bases:
>100_bases GGAAGGTGCCGTGGGCGGAGCGATCCGCCCGCGGCGACCTTGGCAGGGTATGAGGCCCCGCGTCCGACGCCGCGACCCAA ACCAGATCTCGTGCTCTTGG
Product: adenine specific DNA methyltransferase, D12 class
Products: S-adenosyl-L-homocysteine; DNA methylaminopurine [C]
Alternate protein names: DNA Adenine Methylase; Methyltransferase; Adenine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; N6 Adenine-Specific DNA Methyltransferase; Site-Specific DNA-Methyltransferase; Methylase; Adenine-Specific DNA-Methyltransferase; N6 Adenine-Specific DNA Methyltransferase Protein; Phage DNA Adenine Methylase; Type II DNA Methyltransferase; Prophage; DNA Adenine Methyltransferase; Adenine Specific DNA Methyltransferase; Phage Associated Type II DNA-Methyltransferase; Ype IIs Methyltransferase M.AlwI; Prophage DNA Adenine Methylase; Cytosine-Specific DNA Methyltransferase; DNA Methyltransferase; Phage_related Methylase; DNA Adenine Methylase Subfamily; Prophage DNA Methylase; LOW QUALITY PROTEIN DNA Adenine Methylase; Methylase LlaDCHIA; Dam Methylase; Phage-Related Methylase; Adenine-Specific Methyltransferase; DNA Methylase; Type IIs Methyltransferase; Site-Specific DNA Methylase Protein
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MAPWIGGKRNLARRICAILDRSPCLTYAEPFVGMAGIFLRRSSRPRAEVINDRGRDVANLFRILQRHYPQFLDTLRFQLT TRAEFERLGATDPDTLTDLERAARFLYLQRTAFGGKVSGRNFGVSSHRPGRFNLTTLEPMLEDLHSRLAGVIVECLDWAD FLARYDRPETLFYLDPPYWGSETDYGRGLFQREDFGLMAERLAKLQGRFLLSINDVPQIRAIFGRFRITEVTTTYSISGS AKGNGTARPELLVSNWDIGEEG
Sequences:
>Translated_262_residues MAPWIGGKRNLARRICAILDRSPCLTYAEPFVGMAGIFLRRSSRPRAEVINDRGRDVANLFRILQRHYPQFLDTLRFQLT TRAEFERLGATDPDTLTDLERAARFLYLQRTAFGGKVSGRNFGVSSHRPGRFNLTTLEPMLEDLHSRLAGVIVECLDWAD FLARYDRPETLFYLDPPYWGSETDYGRGLFQREDFGLMAERLAKLQGRFLLSINDVPQIRAIFGRFRITEVTTTYSISGS AKGNGTARPELLVSNWDIGEEG >Mature_261_residues APWIGGKRNLARRICAILDRSPCLTYAEPFVGMAGIFLRRSSRPRAEVINDRGRDVANLFRILQRHYPQFLDTLRFQLTT RAEFERLGATDPDTLTDLERAARFLYLQRTAFGGKVSGRNFGVSSHRPGRFNLTTLEPMLEDLHSRLAGVIVECLDWADF LARYDRPETLFYLDPPYWGSETDYGRGLFQREDFGLMAERLAKLQGRFLLSINDVPQIRAIFGRFRITEVTTTYSISGSA KGNGTARPELLVSNWDIGEEG
Specific function: Methylates DNA Within The Sequence GATC And Protects The DNA From Cleavage By The Restriction Endonuclease Mboi. Although It Shares Sequence Specificity With A Number Of Type II Restriction Endonucleases And Methylases, It Is Thought To Act In Postreplica
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 29861; Mature: 29730
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPWIGGKRNLARRICAILDRSPCLTYAEPFVGMAGIFLRRSSRPRAEVINDRGRDVANL CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHH FRILQRHYPQFLDTLRFQLTTRAEFERLGATDPDTLTDLERAARFLYLQRTAFGGKVSGR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC NFGVSSHRPGRFNLTTLEPMLEDLHSRLAGVIVECLDWADFLARYDRPETLFYLDPPYWG CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC SETDYGRGLFQREDFGLMAERLAKLQGRFLLSINDVPQIRAIFGRFRITEVTTTYSISGS CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEEEEEEEECCC AKGNGTARPELLVSNWDIGEEG CCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure APWIGGKRNLARRICAILDRSPCLTYAEPFVGMAGIFLRRSSRPRAEVINDRGRDVANL CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHH FRILQRHYPQFLDTLRFQLTTRAEFERLGATDPDTLTDLERAARFLYLQRTAFGGKVSGR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC NFGVSSHRPGRFNLTTLEPMLEDLHSRLAGVIVECLDWADFLARYDRPETLFYLDPPYWG CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC SETDYGRGLFQREDFGLMAERLAKLQGRFLLSINDVPQIRAIFGRFRITEVTTTYSISGS CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEEEEEEEEEECCC AKGNGTARPELLVSNWDIGEEG CCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; DNA adenine; DNA [C]
Specific reaction: S-Adenosyl-L-methionine + DNA adenine =S-adenosyl-L-homocysteine + DNA methylaminopurine Protein + DNA = Protein-DNA [C]
General reaction: Methyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA