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The map label for this gene is yclN [H]

Identifier: 77465234

GI number: 77465234

Start: 278310

End: 279257

Strand: Direct

Name: yclN [H]

Synonym: RSP_3220

Alternate gene names: 77465234

Gene position: 278310-279257 (Clockwise)

Preceding gene: 77465231

Following gene: 77465235

Centisome position: 29.51

GC content: 72.36

Gene sequence:

>948_bases
ATGGCCTTCCGCCTGGCCCTCGTGGCTCTTTTGCCGCTGGCGGTGCTGAGCCTCTTCGTCGGGGCCGCGGGGCTCGGCCC
GGCGGCCCTCTGGTCCGATCCGCAGGGGCACCTCCTTCTGATCGTCTCGCGCCTGCCGCGCACGCTGGCGGTGATCCTCA
CCGGCTCGGCGCTTGCGGTGGCGGGCGTCGTCATGCAGCAGCTCGTGCGCAACCGCTTCGTCGAGCCCGGCACAACGGGC
ACCGCCGAGGGCGCGGCCATCGGGCTGCTTGTCGTCACGCTGGCGGCGCCCGGCGCGGCGCTCTGGGTGAAGATGATCGT
GGCGAGCCTCGCCGCGATGGCAAGCACCGGCCTCTTCCTCGCGCTGATCCGCCGCCTGCCGCCGCGCGAGGTGCTGCTCG
TGCCGCTGGTGGGCCTCATCCTCTCGGGCGTGCTGCAGTCGGCCGCGACCTTCGTCGCCTGGCAGGCGGACATGATGCAG
CTCGTGGGGATCTGGCTCATGACGGGCGAATTCTCGGGCGTGCTTGCGGGGCGCTACGAGCTTCTGTGGGTGGCGGCCGC
GGCCGCCGCGCTCGCCTTTCTGGCTGCCGACCGGTTCGCGATCCTGGGCCTCGGCGAGCGGACGGCGGTGGGGCTCGGGC
TCGATGCGAGAGGCGTGATGCGGCTGGGACTCCTTGTGGTGGCGGTGGTGACGGCGATGGTGGTGGTGACGGTCGGCATG
GTGCCCTTCGTGGGCCTCGTGGTGCCGAACCTCGTCAACCGGATCATGGGCGACAACCTGCGCGCCACCCTGCCCGTGGT
GGCGGCGGGGGGCGGGGCGCTGGTGCTGGCCTGCGATCTGATCGGCCGCCTCGTGCGCTATCCCTACGAGCTGCCGGTGG
GCACGGTGCTGGGCGTGCTGGGCTCGCTCCTCTTCCTCTGGCTCCTCTGGAGGCCCGCGCGTGGATAG

Upstream 100 bases:

>100_bases
TTCCAGCCACACGCCGGAACCCTTCGGGAGATCTGCGCGATGATCCGACCCTTCTCGGCCGGCCTCGGCCCGGGCCTTCC
CGGGCGGGAGCGGGGCTGAC

Downstream 100 bases:

>100_bases
GTCGATCCGCTGGCTGGTGCCGATCTGCCTCGTCGTCGCCGGACTCTATCTCTTCTGGGGGCTCCGGGCGGCGAACTGGG
CCTTCGCGCTGGAGCTGCGG

Product: ABC ferric siderophore transporter, inner membrane subunit

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MAFRLALVALLPLAVLSLFVGAAGLGPAALWSDPQGHLLLIVSRLPRTLAVILTGSALAVAGVVMQQLVRNRFVEPGTTG
TAEGAAIGLLVVTLAAPGAALWVKMIVASLAAMASTGLFLALIRRLPPREVLLVPLVGLILSGVLQSAATFVAWQADMMQ
LVGIWLMTGEFSGVLAGRYELLWVAAAAAALAFLAADRFAILGLGERTAVGLGLDARGVMRLGLLVVAVVTAMVVVTVGM
VPFVGLVVPNLVNRIMGDNLRATLPVVAAGGGALVLACDLIGRLVRYPYELPVGTVLGVLGSLLFLWLLWRPARG

Sequences:

>Translated_315_residues
MAFRLALVALLPLAVLSLFVGAAGLGPAALWSDPQGHLLLIVSRLPRTLAVILTGSALAVAGVVMQQLVRNRFVEPGTTG
TAEGAAIGLLVVTLAAPGAALWVKMIVASLAAMASTGLFLALIRRLPPREVLLVPLVGLILSGVLQSAATFVAWQADMMQ
LVGIWLMTGEFSGVLAGRYELLWVAAAAAALAFLAADRFAILGLGERTAVGLGLDARGVMRLGLLVVAVVTAMVVVTVGM
VPFVGLVVPNLVNRIMGDNLRATLPVVAAGGGALVLACDLIGRLVRYPYELPVGTVLGVLGSLLFLWLLWRPARG
>Mature_314_residues
AFRLALVALLPLAVLSLFVGAAGLGPAALWSDPQGHLLLIVSRLPRTLAVILTGSALAVAGVVMQQLVRNRFVEPGTTGT
AEGAAIGLLVVTLAAPGAALWVKMIVASLAAMASTGLFLALIRRLPPREVLLVPLVGLILSGVLQSAATFVAWQADMMQL
VGIWLMTGEFSGVLAGRYELLWVAAAAAALAFLAADRFAILGLGERTAVGLGLDARGVMRLGLLVVAVVTAMVVVTVGMV
PFVGLVVPNLVNRIMGDNLRATLPVVAAGGGALVLACDLIGRLVRYPYELPVGTVLGVLGSLLFLWLLWRPARG

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=293, Percent_Identity=35.4948805460751, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790740, Length=309, Percent_Identity=31.3915857605178, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1790741, Length=278, Percent_Identity=31.6546762589928, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786347, Length=292, Percent_Identity=29.4520547945205, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786805, Length=284, Percent_Identity=30.6338028169014, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 32614; Mature: 32483

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRLALVALLPLAVLSLFVGAAGLGPAALWSDPQGHLLLIVSRLPRTLAVILTGSALAV
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEHHHCCHHHHHHHCCHHHHH
AGVVMQQLVRNRFVEPGTTGTAEGAAIGLLVVTLAAPGAALWVKMIVASLAAMASTGLFL
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ALIRRLPPREVLLVPLVGLILSGVLQSAATFVAWQADMMQLVGIWLMTGEFSGVLAGRYE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LLWVAAAAAALAFLAADRFAILGLGERTAVGLGLDARGVMRLGLLVVAVVTAMVVVTVGM
HHHHHHHHHHHHHHHHHHHHEEECCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VPFVGLVVPNLVNRIMGDNLRATLPVVAAGGGALVLACDLIGRLVRYPYELPVGTVLGVL
HHHHHHHHHHHHHHHHCCCCCEECCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GSLLFLWLLWRPARG
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
AFRLALVALLPLAVLSLFVGAAGLGPAALWSDPQGHLLLIVSRLPRTLAVILTGSALAV
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEHHHCCHHHHHHHCCHHHHH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HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]