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The map label for this gene is yagR [H]

Identifier: 77465220

GI number: 77465220

Start: 259328

End: 261547

Strand: Direct

Name: yagR [H]

Synonym: RSP_3206

Alternate gene names: 77465220

Gene position: 259328-261547 (Clockwise)

Preceding gene: 77465219

Following gene: 77465221

Centisome position: 27.5

GC content: 71.08

Gene sequence:

>2220_bases
ATGACCGCTCATCTCGTATTCGACGAGCCCGACAAGCGTAACCGGCTGGATGCCATGGCGCAGGAGGTGGTCGGGCGCCC
CATCGACCGCTCTGAAGGCGCGCTGAAAGTGTCCGGACGGGCCGTCTATGCGGCCGAACAGGCGTCGAGCCTTTGGTCCG
AGAAGCGCGCCGACTGCGCTTACGGCGTCTTCGTGCGGGCCACCGTGCCCTTGGGCCGGGTCGCTTCGCTTGCCTCCGAC
GCGGCGCGCGCGGTTCCCGGCGTGCTGAAGGTGCTGCAGGATCCCCGCCTCGTGCGCCATCCGGCGCAGGGCATGGCGCG
GAAGTCGCCGCCGCAGGATCCGTCCGAGGTCACCTATTTCGGCCAGCCCCTCGCGCTGGTGGTGGCGGAGAGCTTCGAGG
CCGCCCGCGAAGCCGCGCGGCTGGTGCGGGTGGACTACGAGACCTCGGCCGACGCCGAGCTCGACCCCGCCCAGGCGCCG
TCCGAATTCCCCGAGAAGAAGCAGTCGGCGCAGGGGGATCTGGAGGCCGCCCTGCGCGAGGCCGCCGTTTCGCTCGATGC
GACCTACAGCACCCCCTCGATGGCCGCCGCCGCGATGGAACCGCACGCGGCCCTCGCCTGGTGGGAGGGCGACCGGGTGA
CGCTCTGCGGCGCCTATCAGATGGTGTCGCAGAATGCCGAGGAACTGGCCGATGCGCTGGGGATCGCGCCCGAGAAGGTG
CGGGTTCTCGCGCCCTTCATCGGCGGCGGCTTCGGCTCGAAGCTCGGGATCGCGCCCGAGGCCGTGGCGGCGGCCGTGGC
GTCCGAGACGCTCGGCCGGCCGGTGATGGTGACGCTCGCCCGGCAGCGGGAGTTCGAGATTGCCCACCGCCGCTCCGAAA
CCGAGCAGCGGGTGCGCCTCGCCCTCGACGCGGACGGACGGCTCACCGGGATCGGGCACGAGGCGCGGGTGTCGAACCTC
GACGGGGAGAGCTTCTCCGAGCCCGTGCAGCAGGCGACCCATTTCACCTATCGCGGCGAGCATCGTCAGATCCGGCACGA
GGTGGCGCGGGTGAACCTCACCTGCGCGGGGTCGGTGCGCGCGCCGGGCGAGGCGGTGGGGGTCACGATCTTCGAGATGG
CGCTGGACGAGCTGGCCGAGAAGGCGGGCCTCGATCCGCTCGAGCTGCGGCTTCGCAATATTCCCGAAGAGGATCCCGAG
ACCGGCAAGCCCTTCACCTCGCACATGCTGGCCGAGGCGCTGCGGGACGGCGCCGACCGCTTCGGCTGGTCGGACCGGCG
CGCGCCGGGCGAGCGGCGGCAGGGCGAGTGGCTGATCGGGATGGGCATGGCCTCGGCCGTGCGGGTGAACATGCTGCACA
AGGCGCGCGTGCGCGTCACGCTGACGGGCGAGGGCGCCCTCGTCGAGAGCAGCATGACCGACATCGGGACGGGCACCTAC
ACGATCCTCACCCAGATCGTGGCCGAGATGCTGGGCCTCGCGCCCGACCGGGTGCGCACCGTCCTCGGCGACACCGATCT
GCCGGAGGGCTCCGGCTCGGGCGGCTCGATCGGCGCGGCCTCGAACGGCTCGGCCGCGTTCCTCGCCTGCGAGGAGATTC
GCCGGCAGATCGCGGCGGGGATGGGCTGCCCCGAGGAGGAGTTGACCCTGAAGGACGGGCGCGCCACCTGCGGCAACCGG
ACCCGCGATCTGGCCGAGATCGTGACCCAGCCGCTGTCGGCCGAGGGCCATTTCGAGCCCGGCAAGGCCTTGAAGGGCGT
CCGCAGCTCGACCTTTGGCGCGCATTTCGCCGAAGTGGCGGTCAACGAGATCACGGGAGAGGTGCGCGTGCGCCGGATGC
TGGGCGCCTTTGCCGCCGGGCGGATCCTGAACGAGAAGACCGCCCGCTCGCAATGTCTGGGCGGGATGACCTTCGGCATC
GGCATGGCGCTGATGGAAGAGATGGTGCACGACCGCCGCTTCGGTCAGGTGGTGAGCCGGGATCTGGCGAACTACCATAT
CCCCGCCCATGCCGACGTGCCCGCATTGGAGGTTCACTTCCTCGAAGAGCGCGACAGCTACGGCGGCACGCTTCAGGCCA
AGGGGATCGGGGAACTCGGGATCTGCGGATCGGGGGCCGCCGTCCTCAACGCGATCCACAACGCCTGCGGCGTCCGGGTG
CGCGATCTGCCGGCCACGCCGGACAAGGTGCTGGACGGCCTCTGCGCCCTCGGGCGGTAG

Upstream 100 bases:

>100_bases
TGCTGCAGAGCGCCCGAGGTCAGGGCGAGAACGATTTCAAGATCCCGCTCACGCGGCGCGCCCTGACGGCGGCGCTGCGC
GAAGCCACCGGAGGCATGGC

Downstream 100 bases:

>100_bases
GACCGGACTTGCGGGCAGGCTGATGGCCTGCCCGCAGACCGTCGGAAAGCATGCCAAGGGCAGGGACGTCGGCGTCCCAC
ACTGCCGACAAAGCTTAATC

Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 738

Protein sequence:

>739_residues
MTAHLVFDEPDKRNRLDAMAQEVVGRPIDRSEGALKVSGRAVYAAEQASSLWSEKRADCAYGVFVRATVPLGRVASLASD
AARAVPGVLKVLQDPRLVRHPAQGMARKSPPQDPSEVTYFGQPLALVVAESFEAAREAARLVRVDYETSADAELDPAQAP
SEFPEKKQSAQGDLEAALREAAVSLDATYSTPSMAAAAMEPHAALAWWEGDRVTLCGAYQMVSQNAEELADALGIAPEKV
RVLAPFIGGGFGSKLGIAPEAVAAAVASETLGRPVMVTLARQREFEIAHRRSETEQRVRLALDADGRLTGIGHEARVSNL
DGESFSEPVQQATHFTYRGEHRQIRHEVARVNLTCAGSVRAPGEAVGVTIFEMALDELAEKAGLDPLELRLRNIPEEDPE
TGKPFTSHMLAEALRDGADRFGWSDRRAPGERRQGEWLIGMGMASAVRVNMLHKARVRVTLTGEGALVESSMTDIGTGTY
TILTQIVAEMLGLAPDRVRTVLGDTDLPEGSGSGGSIGAASNGSAAFLACEEIRRQIAAGMGCPEEELTLKDGRATCGNR
TRDLAEIVTQPLSAEGHFEPGKALKGVRSSTFGAHFAEVAVNEITGEVRVRRMLGAFAAGRILNEKTARSQCLGGMTFGI
GMALMEEMVHDRRFGQVVSRDLANYHIPAHADVPALEVHFLEERDSYGGTLQAKGIGELGICGSGAAVLNAIHNACGVRV
RDLPATPDKVLDGLCALGR

Sequences:

>Translated_739_residues
MTAHLVFDEPDKRNRLDAMAQEVVGRPIDRSEGALKVSGRAVYAAEQASSLWSEKRADCAYGVFVRATVPLGRVASLASD
AARAVPGVLKVLQDPRLVRHPAQGMARKSPPQDPSEVTYFGQPLALVVAESFEAAREAARLVRVDYETSADAELDPAQAP
SEFPEKKQSAQGDLEAALREAAVSLDATYSTPSMAAAAMEPHAALAWWEGDRVTLCGAYQMVSQNAEELADALGIAPEKV
RVLAPFIGGGFGSKLGIAPEAVAAAVASETLGRPVMVTLARQREFEIAHRRSETEQRVRLALDADGRLTGIGHEARVSNL
DGESFSEPVQQATHFTYRGEHRQIRHEVARVNLTCAGSVRAPGEAVGVTIFEMALDELAEKAGLDPLELRLRNIPEEDPE
TGKPFTSHMLAEALRDGADRFGWSDRRAPGERRQGEWLIGMGMASAVRVNMLHKARVRVTLTGEGALVESSMTDIGTGTY
TILTQIVAEMLGLAPDRVRTVLGDTDLPEGSGSGGSIGAASNGSAAFLACEEIRRQIAAGMGCPEEELTLKDGRATCGNR
TRDLAEIVTQPLSAEGHFEPGKALKGVRSSTFGAHFAEVAVNEITGEVRVRRMLGAFAAGRILNEKTARSQCLGGMTFGI
GMALMEEMVHDRRFGQVVSRDLANYHIPAHADVPALEVHFLEERDSYGGTLQAKGIGELGICGSGAAVLNAIHNACGVRV
RDLPATPDKVLDGLCALGR
>Mature_738_residues
TAHLVFDEPDKRNRLDAMAQEVVGRPIDRSEGALKVSGRAVYAAEQASSLWSEKRADCAYGVFVRATVPLGRVASLASDA
ARAVPGVLKVLQDPRLVRHPAQGMARKSPPQDPSEVTYFGQPLALVVAESFEAAREAARLVRVDYETSADAELDPAQAPS
EFPEKKQSAQGDLEAALREAAVSLDATYSTPSMAAAAMEPHAALAWWEGDRVTLCGAYQMVSQNAEELADALGIAPEKVR
VLAPFIGGGFGSKLGIAPEAVAAAVASETLGRPVMVTLARQREFEIAHRRSETEQRVRLALDADGRLTGIGHEARVSNLD
GESFSEPVQQATHFTYRGEHRQIRHEVARVNLTCAGSVRAPGEAVGVTIFEMALDELAEKAGLDPLELRLRNIPEEDPET
GKPFTSHMLAEALRDGADRFGWSDRRAPGERRQGEWLIGMGMASAVRVNMLHKARVRVTLTGEGALVESSMTDIGTGTYT
ILTQIVAEMLGLAPDRVRTVLGDTDLPEGSGSGGSIGAASNGSAAFLACEEIRRQIAAGMGCPEEELTLKDGRATCGNRT
RDLAEIVTQPLSAEGHFEPGKALKGVRSSTFGAHFAEVAVNEITGEVRVRRMLGAFAAGRILNEKTARSQCLGGMTFGIG
MALMEEMVHDRRFGQVVSRDLANYHIPAHADVPALEVHFLEERDSYGGTLQAKGIGELGICGSGAAVLNAIHNACGVRVR
DLPATPDKVLDGLCALGR

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=761, Percent_Identity=22.0762155059133, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI71773480, Length=754, Percent_Identity=22.9442970822281, Blast_Score=111, Evalue=2e-24,
Organism=Escherichia coli, GI1786478, Length=743, Percent_Identity=43.7415881561238, Blast_Score=545, Evalue=1e-156,
Organism=Escherichia coli, GI1789230, Length=755, Percent_Identity=29.8013245033113, Blast_Score=246, Evalue=5e-66,
Organism=Escherichia coli, GI1789246, Length=808, Percent_Identity=28.3415841584158, Blast_Score=226, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17540638, Length=735, Percent_Identity=25.578231292517, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI32566215, Length=537, Percent_Identity=24.0223463687151, Blast_Score=90, Evalue=5e-18,
Organism=Drosophila melanogaster, GI17737937, Length=712, Percent_Identity=24.5786516853933, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24647195, Length=730, Percent_Identity=23.8356164383562, Blast_Score=112, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24647199, Length=726, Percent_Identity=21.900826446281, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24647197, Length=632, Percent_Identity=24.5253164556962, Blast_Score=108, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24647193, Length=726, Percent_Identity=21.6253443526171, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24647201, Length=732, Percent_Identity=21.7213114754098, Blast_Score=89, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 78943; Mature: 78812

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAHLVFDEPDKRNRLDAMAQEVVGRPIDRSEGALKVSGRAVYAAEQASSLWSEKRADCA
CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHCCCCH
YGVFVRATVPLGRVASLASDAARAVPGVLKVLQDPRLVRHPAQGMARKSPPQDPSEVTYF
HCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCEEEC
GQPLALVVAESFEAAREAARLVRVDYETSADAELDPAQAPSEFPEKKQSAQGDLEAALRE
CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHCHHHHHHCCCHHHHHHHH
AAVSLDATYSTPSMAAAAMEPHAALAWWEGDRVTLCGAYQMVSQNAEELADALGIAPEKV
HHHHCCCCCCCCHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHCCHHHHHHHHCCCHHHH
RVLAPFIGGGFGSKLGIAPEAVAAAVASETLGRPVMVTLARQREFEIAHRRSETEQRVRL
EEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHEEE
ALDADGRLTGIGHEARVSNLDGESFSEPVQQATHFTYRGEHRQIRHEVARVNLTCAGSVR
EECCCCCEECCCCHHHCCCCCCHHHHHHHHHHHCCEECCHHHHHHHHHHHEEEEEECCCC
APGEAVGVTIFEMALDELAEKAGLDPLELRLRNIPEEDPETGKPFTSHMLAEALRDGADR
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FGWSDRRAPGERRQGEWLIGMGMASAVRVNMLHKARVRVTLTGEGALVESSMTDIGTGTY
CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHEEEEEEEEEECCCCCEEECCHHHCCCCHH
TILTQIVAEMLGLAPDRVRTVLGDTDLPEGSGSGGSIGAASNGSAAFLACEEIRRQIAAG
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHC
MGCPEEELTLKDGRATCGNRTRDLAEIVTQPLSAEGHFEPGKALKGVRSSTFGAHFAEVA
CCCCHHCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VNEITGEVRVRRMLGAFAAGRILNEKTARSQCLGGMTFGIGMALMEEMVHDRRFGQVVSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
DLANYHIPAHADVPALEVHFLEERDSYGGTLQAKGIGELGICGSGAAVLNAIHNACGVRV
HHHHCCCCCCCCCCCEEEEEEHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCEE
RDLPATPDKVLDGLCALGR
ECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TAHLVFDEPDKRNRLDAMAQEVVGRPIDRSEGALKVSGRAVYAAEQASSLWSEKRADCA
CEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHCCCCH
YGVFVRATVPLGRVASLASDAARAVPGVLKVLQDPRLVRHPAQGMARKSPPQDPSEVTYF
HCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCEEEC
GQPLALVVAESFEAAREAARLVRVDYETSADAELDPAQAPSEFPEKKQSAQGDLEAALRE
CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHCHHHHHHCCCHHHHHHHH
AAVSLDATYSTPSMAAAAMEPHAALAWWEGDRVTLCGAYQMVSQNAEELADALGIAPEKV
HHHHCCCCCCCCHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHCCHHHHHHHHCCCHHHH
RVLAPFIGGGFGSKLGIAPEAVAAAVASETLGRPVMVTLARQREFEIAHRRSETEQRVRL
EEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHEEE
ALDADGRLTGIGHEARVSNLDGESFSEPVQQATHFTYRGEHRQIRHEVARVNLTCAGSVR
EECCCCCEECCCCHHHCCCCCCHHHHHHHHHHHCCEECCHHHHHHHHHHHEEEEEECCCC
APGEAVGVTIFEMALDELAEKAGLDPLELRLRNIPEEDPETGKPFTSHMLAEALRDGADR
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FGWSDRRAPGERRQGEWLIGMGMASAVRVNMLHKARVRVTLTGEGALVESSMTDIGTGTY
CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHEEEEEEEEEECCCCCEEECCHHHCCCCHH
TILTQIVAEMLGLAPDRVRTVLGDTDLPEGSGSGGSIGAASNGSAAFLACEEIRRQIAAG
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHC
MGCPEEELTLKDGRATCGNRTRDLAEIVTQPLSAEGHFEPGKALKGVRSSTFGAHFAEVA
CCCCHHCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VNEITGEVRVRRMLGAFAAGRILNEKTARSQCLGGMTFGIGMALMEEMVHDRRFGQVVSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
DLANYHIPAHADVPALEVHFLEERDSYGGTLQAKGIGELGICGSGAAVLNAIHNACGVRV
HHHHCCCCCCCCCCCEEEEEEHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCEE
RDLPATPDKVLDGLCALGR
ECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]