| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is iorB [H]
Identifier: 77465177
GI number: 77465177
Start: 216988
End: 219123
Strand: Reverse
Name: iorB [H]
Synonym: RSP_3163
Alternate gene names: 77465177
Gene position: 219123-216988 (Counterclockwise)
Preceding gene: 77465178
Following gene: 77465176
Centisome position: 23.24
GC content: 70.83
Gene sequence:
>2136_bases ATGACCATGCTCTCGCGCCGCCGCTTCCTCGCCTCGACCGCGGGCTTCACCCTCGCCCTCGTGCTGCCCACTCCCTTCGC CCGGGCGCAGGGCGCGCCGCCGGACCTGCCCGCCACGCCCAACGCCTTCATCCGCGTGGGCGCGGACGATACGGTGACGG TCATCATCAAGCATCTCGAGATGGGCCAGGGCCCCTACACCGGCCTTGCGACGCTGGTGGCCGAGGAGATGGACGCGGAC TGGAGCCAGATGCGCGCCGAAGCGGCCCCCGCCGACGATGCGCTCTACAAGAACCTTGCCTTCGGGGCGCAGGGCACCGG CGGCTCGACCGCCATCGCCAACAGCTACATCCAGATGCGCAAGGCGGGTGCTGCGGCCCGCGCCATGCTGGTCGAGGCCG CAGCCGAGGAATGGGGCGTGGCGGCCTCCGAGATCGCCGTCCGCGCGGGGCGGCTCTCGCATCCCGGCGGCAAAGAGGCG GGCTTCGGCGCCTTCGCGGCCGCCGCGGCCGAGCGCGCGGTGCCGCAGGATCCGCCGCTGAAGGACCCGTCGCAGTTCGT GCTGATCGGCGGCACGGGCAAGCGGCTCGATTCCGCCGCCAAGTCGGACGGCACCGCCGAATTCACGCTCGACATCTACC GCGAGGGGATGCTGACGGTCGTGGTGGCCCATCCGCCCGCCTTCGGCGCCACCGTGGCCTCCTATGACGATGCCCGCGCG CTGAAGGTGAAGGGCGTGGAGATGGTGCGCCAGATCCCCGAGGGGATCGCGGTCTATGCCCGCAACACCTTCGCCGCCAT CAAGGGCCGCGACGCGCTGGAGATCCGCTGGGACGAGAGCAAGGCCGAGCGGCGCAGCTCCTCCGCCATGCTGGAAGACA TGGCCGGTGCGCTGGCCGAGGCCCGGGTGGTCGAGGAATCCGGCGACAAGGGCGCCATCGAGGGCGCCGCCGAGGTGCTT CAGGCCGATTACCGCTTCCCCTATCTCGCCCATGCGCCGATGGAGCCGCTCGATGCGGTGATCGAGGTGAAGGAGGGCCG CGCCGAGCTCTGGTATGGCTGCCAGTTCCCCTCGATCGACCGGCCGACCGTGGCCCAGACCCTCGGCCTTCCGATGGAGT CCGTCAGGATCAACGTGCTCCTCGCGGGCGGCTCGTTCGGGCGGCGCGCGCAGGGCAACGGGCATCTCGCCGCCGAAATC GCCCATATCGCGCAGGCCGCCGGGCGCGACGGCGCCTTCAAGCTGCTCTGGACCCGCGAGGACGATCTGAAGGGCGGCTA CTACCGCCCGATGACGCTCCACCGGCTGCGTGCCGGTCTCGATGCCGAGGGCCGGATCGTCGGCTGGGAGAATGCCGTCG CGAACCAGTCGATCATGGCAGGCACCGCGCTCGAGGCCTTCATGCAGGACGGGCTGGATCCCAGCTCCTACGAGGGATCG AACGATCTGCCCTACGACGTGGGGGCGCGACGCATCTCCTGGGCGCGGGTGGAAAGCCCGGTGCCCGTGCTCTGGTGGCG CTCGGTCGGCCACACGCACACGGCCTTCGCGGTCGAGGTCTTCCTCGACGAGGTGCTCGAGCGGGCGGGCAAGGATCCGG TGCAGGGGCGGCTCGATCTGATGACGCCCGAGGCGGGGCGCTACCGCGGCGTGCTGGAAAAGGTGGCCGAGATCGCGGAC TGGCAGGGCCGCACCCGCGAGGGACGCGCCTATGGCGTGGCGGTCGCCAAGAGCTTCGGCACCTATGTGGCCCAGATCGT CGAGGTCGAGAACGGCGGGGCGCTGCCGAAGGTCACGCAGGTCTGGTGCGCCGTCGATTGCGGCGTGGCGGTCAACCCCG ACGTGATCCGCGCCCAGATGGAGGGCGGCATCGGCTATGCGCTTTCGGCCGCGCTTTACAGCGCGATCACGCTCGATGGC GAGGGGCGGGTGCAGCAGTCGAACTTCGACGATTACCGCCTGTTGCGCATCCACGAGATGCCGCAGGTCCATGTGGCGAT CCTGCCCTCGACCGAGCCGCCCACCGGCGTGGGCGAGCCCGGCGTGCCGCCGCTTGCCCCGGCCGTGGCGAATGCCTGGC GCGCCCTCACGGGTCAGCCGGTGCGCCAGCTTCCCTTCGCGCAACTTCTGTCCTGA
Upstream 100 bases:
>100_bases GATCGATCACGCGATGGGCGGCAACCTCTGCCGCTGCGCCACCTATGTCCGCATCCGGCAGGCGATCCATGACGCCGCCC GCACCCTGGAGGGCTGAGCC
Downstream 100 bases:
>100_bases GGTGACCATGCGCCTTTCCTTCCTCGCCGCAGCAATGCTCGCGGCGGCCCCTGCGCTCGCGCAGGACCTGCGCGGGCCCG ACGCCTTCGCCGACATCGCC
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 711; Mature: 710
Protein sequence:
>711_residues MTMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLEMGQGPYTGLATLVAEEMDAD WSQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMRKAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEA GFGAFAAAAAERAVPQDPPLKDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARA LKVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAEARVVEESGDKGAIEGAAEVL QADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSIDRPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEI AHIAQAAGRDGAFKLLWTREDDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGS NDLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDLMTPEAGRYRGVLEKVAEIAD WQGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQVWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDG EGRVQQSNFDDYRLLRIHEMPQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS
Sequences:
>Translated_711_residues MTMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLEMGQGPYTGLATLVAEEMDAD WSQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMRKAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEA GFGAFAAAAAERAVPQDPPLKDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARA LKVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAEARVVEESGDKGAIEGAAEVL QADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSIDRPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEI AHIAQAAGRDGAFKLLWTREDDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGS NDLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDLMTPEAGRYRGVLEKVAEIAD WQGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQVWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDG EGRVQQSNFDDYRLLRIHEMPQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS >Mature_710_residues TMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLEMGQGPYTGLATLVAEEMDADW SQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMRKAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEAG FGAFAAAAAERAVPQDPPLKDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARAL KVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAEARVVEESGDKGAIEGAAEVLQ ADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSIDRPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEIA HIAQAAGRDGAFKLLWTREDDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGSN DLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDLMTPEAGRYRGVLEKVAEIADW QGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQVWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDGE GRVQQSNFDDYRLLRIHEMPQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 75926; Mature: 75795
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLE CCCCHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH MGQGPYTGLATLVAEEMDADWSQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMR CCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEAGFGAFAAAAAERAVPQDPPL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC KDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARA CCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCEECCCCCCCE LKVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAE EEEHHHHHHHHCCCCEEEEECCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH ARVVEESGDKGAIEGAAEVLQADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSID HHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCC RPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEIAHIAQAAGRDGAFKLLWTRE CCHHHHHHCCCHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC DDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGS CCCCCCEECCHHHHHHHCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC NDLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDL CCCCCCCCCCEEEHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE MTPEAGRYRGVLEKVAEIADWQGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQ ECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHEEECCCCCCCHHHH VWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDGEGRVQQSNFDDYRLLRIHEM HHEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCEECCCCCCEEEEEEECC PQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHCC >Mature Secondary Structure TMLSRRRFLASTAGFTLALVLPTPFARAQGAPPDLPATPNAFIRVGADDTVTVIIKHLE CCCHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH MGQGPYTGLATLVAEEMDADWSQMRAEAAPADDALYKNLAFGAQGTGGSTAIANSYIQMR CCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KAGAAARAMLVEAAAEEWGVAASEIAVRAGRLSHPGGKEAGFGAFAAAAAERAVPQDPPL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC KDPSQFVLIGGTGKRLDSAAKSDGTAEFTLDIYREGMLTVVVAHPPAFGATVASYDDARA CCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCEECCCCCCCE LKVKGVEMVRQIPEGIAVYARNTFAAIKGRDALEIRWDESKAERRSSSAMLEDMAGALAE EEEHHHHHHHHCCCCEEEEECCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH ARVVEESGDKGAIEGAAEVLQADYRFPYLAHAPMEPLDAVIEVKEGRAELWYGCQFPSID HHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCC RPTVAQTLGLPMESVRINVLLAGGSFGRRAQGNGHLAAEIAHIAQAAGRDGAFKLLWTRE CCHHHHHHCCCHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC DDLKGGYYRPMTLHRLRAGLDAEGRIVGWENAVANQSIMAGTALEAFMQDGLDPSSYEGS CCCCCCEECCHHHHHHHCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC NDLPYDVGARRISWARVESPVPVLWWRSVGHTHTAFAVEVFLDEVLERAGKDPVQGRLDL CCCCCCCCCCEEEHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE MTPEAGRYRGVLEKVAEIADWQGRTREGRAYGVAVAKSFGTYVAQIVEVENGGALPKVTQ ECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHEEECCCCCCCHHHH VWCAVDCGVAVNPDVIRAQMEGGIGYALSAALYSAITLDGEGRVQQSNFDDYRLLRIHEM HHEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCEECCCCCCEEEEEEECC PQVHVAILPSTEPPTGVGEPGVPPLAPAVANAWRALTGQPVRQLPFAQLLS CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]