| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is yhiI [H]
Identifier: 77465174
GI number: 77465174
Start: 211433
End: 212428
Strand: Reverse
Name: yhiI [H]
Synonym: RSP_3160
Alternate gene names: 77465174
Gene position: 212428-211433 (Counterclockwise)
Preceding gene: 77465175
Following gene: 77465173
Centisome position: 22.53
GC content: 72.29
Gene sequence:
>996_bases ATGATGCGCGCCCTCCTTCCCTTCCTCCTCGCACCGGCGCTGGCCTGTGCGCCCGCGATGGCCGAGACGCCGTTCGAGAA GCTCAAGGCCCGCTTCTTCGCCGAGGAGACCGAGGGCATCGCGCGCTCGAACGGGCGGATCGAGGCGCAGACGGTGGATG TGGCGGCCAAGCTCGCCGGGCGCGTGACCGAGGTGCTGGTCGCGGAGGGCCAGATCGTGTCGCCCGGCGATCCGGTCGCG CGGCTCGACGACCGCGATGCGCAGGCGCAGCTTCTGGCGGCCAAGGCCGCGCTCATGCGCGCCCACGCGGGCAAGAGCGT GGCCGAGGCGAGCGTGGCGCAGGCGGACAGCGCGCTCACCGTGGCCGAGACCAACCGGGACCGGGTGGTGCAGCTGCACG CCGACAAGCATGTGTCGGACGCGGTGCGCGACGATGCGGTCAATGCCGCCGTCTCGGCCGAAGCGGCGCTGAAGATGGCC CGGGCGCAGGTGACGGAGTCCGAAGCGCTGATCGCTGCCGCCGAGGCCGACCTCGCCCGCGCCGAGATCGCGCTCGAGGA TCTGACGATCGCGGCCCCGGTGCGCGGGCGCGTGGTCTACCGGCTGCGCGAGCCGGGCGAGGTGGTGGCGGCCGGCGCGG CGGTGGTCTCGATCCTCGACCTCTCCGACGTCTACATGAACATCTACCTGCCCGCCGCCGACGTGGGGCCGCTGGTGCTG AACGACGAGGCGCGGCTGATCCTCGATCCGGTGCCGCGCTACGTCATCCCCGCCACCGTCACCTTCATCTCGCCCGAGGC GCAGTTCACGCCGAAGTCGGTCGAGACCGCCTCGGAGCGCGAGGATCTGGTGTTCCGGGTGAAGCTCCGGGTGCCGCCCG AGCTGCTCTCCCGGTTCGAGACCCAGATCAAGACCGGCGTCCGCGGTCTGGGCTTCGTGCGCACCGAGCCCGGCCGCGAC TGGCCCGCCGATCTGGCCGTGAAGCTGCCGGACTGA
Upstream 100 bases:
>100_bases TGGCGGCCGATCCCCGACCGGCGAGACACTGGACGCTCGCCCCCCGGAGGTCATTATCGCCTCACGGGCCCGGCTGCCCG GTCCACGGGAGACTCAGTCC
Downstream 100 bases:
>100_bases GGGCATGGAGAGCGTAGCCGAGATCGCGGGCGTCTCGCACCGCTACGGCACCGTGACCGCCCTCGATGCGGTCAGCCTCG CCATTCCCGCGGGCCGGATG
Product: HlyD family membrane fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MMRALLPFLLAPALACAPAMAETPFEKLKARFFAEETEGIARSNGRIEAQTVDVAAKLAGRVTEVLVAEGQIVSPGDPVA RLDDRDAQAQLLAAKAALMRAHAGKSVAEASVAQADSALTVAETNRDRVVQLHADKHVSDAVRDDAVNAAVSAEAALKMA RAQVTESEALIAAAEADLARAEIALEDLTIAAPVRGRVVYRLREPGEVVAAGAAVVSILDLSDVYMNIYLPAADVGPLVL NDEARLILDPVPRYVIPATVTFISPEAQFTPKSVETASEREDLVFRVKLRVPPELLSRFETQIKTGVRGLGFVRTEPGRD WPADLAVKLPD
Sequences:
>Translated_331_residues MMRALLPFLLAPALACAPAMAETPFEKLKARFFAEETEGIARSNGRIEAQTVDVAAKLAGRVTEVLVAEGQIVSPGDPVA RLDDRDAQAQLLAAKAALMRAHAGKSVAEASVAQADSALTVAETNRDRVVQLHADKHVSDAVRDDAVNAAVSAEAALKMA RAQVTESEALIAAAEADLARAEIALEDLTIAAPVRGRVVYRLREPGEVVAAGAAVVSILDLSDVYMNIYLPAADVGPLVL NDEARLILDPVPRYVIPATVTFISPEAQFTPKSVETASEREDLVFRVKLRVPPELLSRFETQIKTGVRGLGFVRTEPGRD WPADLAVKLPD >Mature_331_residues MMRALLPFLLAPALACAPAMAETPFEKLKARFFAEETEGIARSNGRIEAQTVDVAAKLAGRVTEVLVAEGQIVSPGDPVA RLDDRDAQAQLLAAKAALMRAHAGKSVAEASVAQADSALTVAETNRDRVVQLHADKHVSDAVRDDAVNAAVSAEAALKMA RAQVTESEALIAAAEADLARAEIALEDLTIAAPVRGRVVYRLREPGEVVAAGAAVVSILDLSDVYMNIYLPAADVGPLVL NDEARLILDPVPRYVIPATVTFISPEAQFTPKSVETASEREDLVFRVKLRVPPELLSRFETQIKTGVRGLGFVRTEPGRD WPADLAVKLPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789900, Length=321, Percent_Identity=42.3676012461059, Blast_Score=211, Evalue=7e-56, Organism=Escherichia coli, GI1787013, Length=273, Percent_Identity=25.2747252747253, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 35324; Mature: 35324
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRALLPFLLAPALACAPAMAETPFEKLKARFFAEETEGIARSNGRIEAQTVDVAAKLAG CHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCHHHCCCEEEEHHHHHHHHHHH RVTEVLVAEGQIVSPGDPVARLDDRDAQAQLLAAKAALMRAHAGKSVAEASVAQADSALT HHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE VAETNRDRVVQLHADKHVSDAVRDDAVNAAVSAEAALKMARAQVTESEALIAAAEADLAR EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHH AEIALEDLTIAAPVRGRVVYRLREPGEVVAAGAAVVSILDLSDVYMNIYLPAADVGPLVL HHHHHHHEEEECCCCCEEEEEECCCCHHEEHHHHHHHHHHHCCEEEEEEECCCCCCCEEE NDEARLILDPVPRYVIPATVTFISPEAQFTPKSVETASEREDLVFRVKLRVPPELLSRFE CCCCCEEECCCCCEEECEEEEEECCCCCCCCCHHHHCCCCCCEEEEEEECCCHHHHHHHH TQIKTGVRGLGFVRTEPGRDWPADLAVKLPD HHHHHCCCCCCEEECCCCCCCCCCCEEECCC >Mature Secondary Structure MMRALLPFLLAPALACAPAMAETPFEKLKARFFAEETEGIARSNGRIEAQTVDVAAKLAG CHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCHHHCCCEEEEHHHHHHHHHHH RVTEVLVAEGQIVSPGDPVARLDDRDAQAQLLAAKAALMRAHAGKSVAEASVAQADSALT HHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE VAETNRDRVVQLHADKHVSDAVRDDAVNAAVSAEAALKMARAQVTESEALIAAAEADLAR EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHH AEIALEDLTIAAPVRGRVVYRLREPGEVVAAGAAVVSILDLSDVYMNIYLPAADVGPLVL HHHHHHHEEEECCCCCEEEEEECCCCHHEEHHHHHHHHHHHCCEEEEEEECCCCCCCEEE NDEARLILDPVPRYVIPATVTFISPEAQFTPKSVETASEREDLVFRVKLRVPPELLSRFE CCCCCEEECCCCCEEECEEEEEECCCCCCCCCHHHHCCCCCCEEEEEEECCCHHHHHHHH TQIKTGVRGLGFVRTEPGRDWPADLAVKLPD HHHHHCCCCCCEEECCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]