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The map label for this gene is ydhS [H]

Identifier: 77465151

GI number: 77465151

Start: 186370

End: 187974

Strand: Reverse

Name: ydhS [H]

Synonym: RSP_3137

Alternate gene names: 77465151

Gene position: 187974-186370 (Counterclockwise)

Preceding gene: 77465153

Following gene: 77465150

Centisome position: 19.93

GC content: 65.92

Gene sequence:

>1605_bases
ATGGCGCGTGTCGCGATCGTCGGAACCGGGCCCACGGGCATCTACACCTTCTTCAACCTCATCCAGACCGACCCCTCGCA
TCACATCACCCTGTTCGAACGGGGCGAGAAGGCGGGCATCGGCCTGCCCTACTCACCCGAGGCGGCCAGCAAATCCATGC
TGGCCAATATCGCAAGCATCGAGATCCCGCCCATCGAGGCCACCTATCTGGATTGGTTGAAGGGTCAGCCGGACGCGAAG
CTCCGCGCCTACGGCCTTGACCGGGCCGAGCTGGATGACCGCCAGTTCACGCCGCGTCTGCTGCTGGGAGAGTATTTCCG
CGATCAGCTGCTGTCTCTGCTGGATCGTCACCGCGCCCGCACCGAGGTGCTCGAGACTACCGAGGTTACGGACGTCATCG
CGCGCAACGATGCCCTGTTCCTGCGCGCGGCCGAGCGCGAGTTCGGCCCGTTCGACCGTGTGATCCTCGCCACCGGACAT
GTGTTTCCCGACGCGGATGAAGCGACCCGCAGCTATTTCCCCAGCCCGTGGTCCGGCCTGATCCAGGCGGAGGTTCCGCC
GGTGTCCGTGGGCATCATGGGCACCTCGCTCAGTTCCATCGACGCGGCGATGGCGGTGGCAAACCAGCACGGCCGGTTTC
GCCGGCACGGTGAGGAGCTGACCTTCGAACCAGCGACCGAGGGCCTGCATCTGACCCTGATGTCCTGGTCCGGCGTGCTG
CCCGAGGCCGATTTCTGGTGCCCGATCCCCTACGAACCCCTGCAGGTGATGACCGACGACGCGGTGGCACAGTGCGCCGC
GCAGGCGGACCCGCTGGATCGGGTCTTCGCGCTGTTGCAGGAGGAGATCGCGCAAGCCGACCCTGCCTATGCCGACCGGA
TCGGGCTGGCCACGCTGACCGCCGACACCTTCGGCGATGCCTATTTCGCGGCGCGCGAGGCGCAGGATCCCTTCCGCTGG
GCCCGCAGGAATCTGGAGGAGGTCGAACACAACAAGGCGCACCAGATCACCGTCCCCTGGCGATATGCCCTGCTGCGGAT
GCACGAGAAGGTGGAAACGCTGGTGCCGCATCTGGGCGATGCGGATCGCAAGCGGTTCGATGGCGGGCTGAAGAAGGTCT
TCGTCGACAATTACGCCGCCGTGCCCTCCGAATCCATCCGACGCCTTCTGGCGCTCCGGGATGCCGGGCTGTTGTCGGTT
CTGGCGCTCGGCGAAGATTACGAGCTGAAGCGCGAGCCCGACCGCACGGTGATCCACGCCAAGGGAAAGACGCATGTGTT
TCCGGTATTCATCGACGCACGAGGCCAGAAGCCGATGGAAAGCAGGGATATGCCCTTCCCGAGCCTGCGGCGGGCGCTGA
TGGGATCGAAACAGGACATCCCCGAGCTGGACGCCGACTTCGCCCTCGTCGGCGTTCCCGACTATGACCGTCACGCGCAC
CTGGCCGCGATCCCCTACCTGATGCACGATCGGCCCTTCGTCCAAGGCATCACCGCCAGCGCCGAAATCGGCGCCACGAT
TGCCCGCGGGATCTCTCAGGCCGTGGGCGACCGTGCTGCCCAGGGCGGTCGGAGATCTTCCGCTCCTGTCGTGGCGACCG
GCTGA

Upstream 100 bases:

>100_bases
GATCGCGATGCGACAGGGAGGCTGCGGACAGGAGACTGCCGGCCGGGGAACCGCCGCGCCGCGCGGCGGGTTCTCCGACC
ACCAATCTCAGGGGAGTCGC

Downstream 100 bases:

>100_bases
AGATGGTCTGGGACGGCAGACACAGGCTCAGCCGCTTGCGGTGGAGACTGCAGATCTGAGGATCCGCAGGGCCGGGCGCG
AGGAGCATTGCGCCAGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MARVAIVGTGPTGIYTFFNLIQTDPSHHITLFERGEKAGIGLPYSPEAASKSMLANIASIEIPPIEATYLDWLKGQPDAK
LRAYGLDRAELDDRQFTPRLLLGEYFRDQLLSLLDRHRARTEVLETTEVTDVIARNDALFLRAAEREFGPFDRVILATGH
VFPDADEATRSYFPSPWSGLIQAEVPPVSVGIMGTSLSSIDAAMAVANQHGRFRRHGEELTFEPATEGLHLTLMSWSGVL
PEADFWCPIPYEPLQVMTDDAVAQCAAQADPLDRVFALLQEEIAQADPAYADRIGLATLTADTFGDAYFAAREAQDPFRW
ARRNLEEVEHNKAHQITVPWRYALLRMHEKVETLVPHLGDADRKRFDGGLKKVFVDNYAAVPSESIRRLLALRDAGLLSV
LALGEDYELKREPDRTVIHAKGKTHVFPVFIDARGQKPMESRDMPFPSLRRALMGSKQDIPELDADFALVGVPDYDRHAH
LAAIPYLMHDRPFVQGITASAEIGATIARGISQAVGDRAAQGGRRSSAPVVATG

Sequences:

>Translated_534_residues
MARVAIVGTGPTGIYTFFNLIQTDPSHHITLFERGEKAGIGLPYSPEAASKSMLANIASIEIPPIEATYLDWLKGQPDAK
LRAYGLDRAELDDRQFTPRLLLGEYFRDQLLSLLDRHRARTEVLETTEVTDVIARNDALFLRAAEREFGPFDRVILATGH
VFPDADEATRSYFPSPWSGLIQAEVPPVSVGIMGTSLSSIDAAMAVANQHGRFRRHGEELTFEPATEGLHLTLMSWSGVL
PEADFWCPIPYEPLQVMTDDAVAQCAAQADPLDRVFALLQEEIAQADPAYADRIGLATLTADTFGDAYFAAREAQDPFRW
ARRNLEEVEHNKAHQITVPWRYALLRMHEKVETLVPHLGDADRKRFDGGLKKVFVDNYAAVPSESIRRLLALRDAGLLSV
LALGEDYELKREPDRTVIHAKGKTHVFPVFIDARGQKPMESRDMPFPSLRRALMGSKQDIPELDADFALVGVPDYDRHAH
LAAIPYLMHDRPFVQGITASAEIGATIARGISQAVGDRAAQGGRRSSAPVVATG
>Mature_533_residues
ARVAIVGTGPTGIYTFFNLIQTDPSHHITLFERGEKAGIGLPYSPEAASKSMLANIASIEIPPIEATYLDWLKGQPDAKL
RAYGLDRAELDDRQFTPRLLLGEYFRDQLLSLLDRHRARTEVLETTEVTDVIARNDALFLRAAEREFGPFDRVILATGHV
FPDADEATRSYFPSPWSGLIQAEVPPVSVGIMGTSLSSIDAAMAVANQHGRFRRHGEELTFEPATEGLHLTLMSWSGVLP
EADFWCPIPYEPLQVMTDDAVAQCAAQADPLDRVFALLQEEIAQADPAYADRIGLATLTADTFGDAYFAAREAQDPFRWA
RRNLEEVEHNKAHQITVPWRYALLRMHEKVETLVPHLGDADRKRFDGGLKKVFVDNYAAVPSESIRRLLALRDAGLLSVL
ALGEDYELKREPDRTVIHAKGKTHVFPVFIDARGQKPMESRDMPFPSLRRALMGSKQDIPELDADFALVGVPDYDRHAHL
AAIPYLMHDRPFVQGITASAEIGATIARGISQAVGDRAAQGGRRSSAPVVATG

Specific function: Unknown

COG id: COG4529

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787957, Length=521, Percent_Identity=52.5911708253359, Blast_Score=559, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59054; Mature: 58922

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVAIVGTGPTGIYTFFNLIQTDPSHHITLFERGEKAGIGLPYSPEAASKSMLANIASI
CCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHE
EIPPIEATYLDWLKGQPDAKLRAYGLDRAELDDRQFTPRLLLGEYFRDQLLSLLDRHRAR
ECCCCCHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TEVLETTEVTDVIARNDALFLRAAEREFGPFDRVILATGHVFPDADEATRSYFPSPWSGL
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCC
IQAEVPPVSVGIMGTSLSSIDAAMAVANQHGRFRRHGEELTFEPATEGLHLTLMSWSGVL
EEECCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCCEEEEEEECCCCC
PEADFWCPIPYEPLQVMTDDAVAQCAAQADPLDRVFALLQEEIAQADPAYADRIGLATLT
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCEEEEE
ADTFGDAYFAAREAQDPFRWARRNLEEVEHNKAHQITVPWRYALLRMHEKVETLVPHLGD
HHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCCC
ADRKRFDGGLKKVFVDNYAAVPSESIRRLLALRDAGLLSVLALGEDYELKREPDRTVIHA
HHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCEEEEE
KGKTHVFPVFIDARGQKPMESRDMPFPSLRRALMGSKQDIPELDADFALVGVPDYDRHAH
CCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCH
LAAIPYLMHDRPFVQGITASAEIGATIARGISQAVGDRAAQGGRRSSAPVVATG
HHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC
>Mature Secondary Structure 
ARVAIVGTGPTGIYTFFNLIQTDPSHHITLFERGEKAGIGLPYSPEAASKSMLANIASI
CEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHE
EIPPIEATYLDWLKGQPDAKLRAYGLDRAELDDRQFTPRLLLGEYFRDQLLSLLDRHRAR
ECCCCCHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TEVLETTEVTDVIARNDALFLRAAEREFGPFDRVILATGHVFPDADEATRSYFPSPWSGL
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCC
IQAEVPPVSVGIMGTSLSSIDAAMAVANQHGRFRRHGEELTFEPATEGLHLTLMSWSGVL
EEECCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCCEEEEEEECCCCC
PEADFWCPIPYEPLQVMTDDAVAQCAAQADPLDRVFALLQEEIAQADPAYADRIGLATLT
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCEEEEE
ADTFGDAYFAAREAQDPFRWARRNLEEVEHNKAHQITVPWRYALLRMHEKVETLVPHLGD
HHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCCC
ADRKRFDGGLKKVFVDNYAAVPSESIRRLLALRDAGLLSVLALGEDYELKREPDRTVIHA
HHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCEEEEE
KGKTHVFPVFIDARGQKPMESRDMPFPSLRRALMGSKQDIPELDADFALVGVPDYDRHAH
CCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCH
LAAIPYLMHDRPFVQGITASAEIGATIARGISQAVGDRAAQGGRRSSAPVVATG
HHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023191; 9278503 [H]