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The map label for this gene is yhhT [H]

Identifier: 77465129

GI number: 77465129

Start: 160781

End: 161947

Strand: Reverse

Name: yhhT [H]

Synonym: RSP_3116

Alternate gene names: 77465129

Gene position: 161947-160781 (Counterclockwise)

Preceding gene: 77465131

Following gene: 77465128

Centisome position: 17.17

GC content: 66.32

Gene sequence:

>1167_bases
ATGCAGAACGAGCGGATCGGCGAGGCCGGAACCCTTCTGGAGCCGGAAGCGCCCGACGTGCCCTCCGAGAACGAGATCAG
CCGTCTCAACCACCTGATCGCGATCCGCAGGCTGCTGGGGATCATCCTTCTGGTCCTCGTGGTCATGGGCTTCTATTTCG
CCCGCGACGTGGTCCTGCCGCTGATGATCGGCCTTCTGCTGGCGCTGACCTTCAGCCCGGTCGTGCGGGCCCTGCAGCGG
ATCGGCATCGCACCGCCCATCACCGCGACCGCCCTCATCACCGCCCTCGCCGCCGTCATCGCGGTCAGCGCCTTCCTTCT
GAGCGGCCCTGTCTCGGACTGGATCAATCAGGCGCCGCGGCTGGGCGATCAGCTGCGCGAGCGGGCCCAGACCATCCTCG
ACTCGTTCGAGGCGGTGCGGAACGCATCGGAGCAGGTCTCGGAAATCACCGACAGCGAGGATCCGACGGTGCAGCGCGTG
GCCGTGCAGACGCCGGGGATCCTGTCGTCCGCGGTCGGCAGCGTGGCCTCGATCCTCACCACGATCATCGTGACGCTGGT
GCTGGCGCTTTTTCTGCTCGCCTCGGGTGACCTGTTCTACATCAAGCTGATCGAGGGCTTCCCCCGCTTCGGCGACAAGA
AGCGCGCCCTGCGCATCGTCTACGGGATCGAGCGGCGCGTCTCGCGCTACCTCCTGTCGGTGACCATCATCAATGCGGGG
CTGGGGGTGGTGATCGGCCTTCTGATGTGGGGCACGGGAATGCCGAGCCCGCTCGTCTGGGCCATGGCGGCCTTCCTTCT
GAACTTCCTGCCCTACATCGGCGCCATTGCCGGCGTTGCGCTGTCCGCGGCCGTGGCCATCGTGCATTACGATCACCTGA
CGCAGGCGCTGCTGGTGCCCGCGCTCTACCTCACGGCCACCGCCATCGAGGGGCAGCTCGTCACCCCCATCGTCCTCGGC
CGCAGGCTCGAGCTGAACACGGTCTCGGTCTTCGTCACGGTGATCTTCTGGGGATGGCTCTGGGGCATTCCGGGAGCGCT
CGTGGCGGTGCCCTTCCTCGTCTGCATCAAGGTGGTCTGCGACAATGTCGAATCCCTGCATGCGGTCGGCAATTTTCTGG
GCGCTCGCGCGCCGTTGCCCGATCTCGAGCAGGATACGCCGGAGTAA

Upstream 100 bases:

>100_bases
TTTTCGGCAAGTCGCCGGCGCGGAACATGAGGGGCGGCATCACGTTGTGCACCCGATCGGCCCAGCGGCCGCGCTGCCGG
TGCACGGCGATGGGGGGATA

Downstream 100 bases:

>100_bases
GGGAACCGGGCGCGCGGATCGTCGTTCCCTCGCCAGACCTTCAGCGGAGGATCCTCCTTGACCATCATCTGGACCATCAT
CATCGGCTTCATCGCCGGCG

Product: membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MQNERIGEAGTLLEPEAPDVPSENEISRLNHLIAIRRLLGIILLVLVVMGFYFARDVVLPLMIGLLLALTFSPVVRALQR
IGIAPPITATALITALAAVIAVSAFLLSGPVSDWINQAPRLGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTVQRV
AVQTPGILSSAVGSVASILTTIIVTLVLALFLLASGDLFYIKLIEGFPRFGDKKRALRIVYGIERRVSRYLLSVTIINAG
LGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIAGVALSAAVAIVHYDHLTQALLVPALYLTATAIEGQLVTPIVLG
RRLELNTVSVFVTVIFWGWLWGIPGALVAVPFLVCIKVVCDNVESLHAVGNFLGARAPLPDLEQDTPE

Sequences:

>Translated_388_residues
MQNERIGEAGTLLEPEAPDVPSENEISRLNHLIAIRRLLGIILLVLVVMGFYFARDVVLPLMIGLLLALTFSPVVRALQR
IGIAPPITATALITALAAVIAVSAFLLSGPVSDWINQAPRLGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTVQRV
AVQTPGILSSAVGSVASILTTIIVTLVLALFLLASGDLFYIKLIEGFPRFGDKKRALRIVYGIERRVSRYLLSVTIINAG
LGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIAGVALSAAVAIVHYDHLTQALLVPALYLTATAIEGQLVTPIVLG
RRLELNTVSVFVTVIFWGWLWGIPGALVAVPFLVCIKVVCDNVESLHAVGNFLGARAPLPDLEQDTPE
>Mature_388_residues
MQNERIGEAGTLLEPEAPDVPSENEISRLNHLIAIRRLLGIILLVLVVMGFYFARDVVLPLMIGLLLALTFSPVVRALQR
IGIAPPITATALITALAAVIAVSAFLLSGPVSDWINQAPRLGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTVQRV
AVQTPGILSSAVGSVASILTTIIVTLVLALFLLASGDLFYIKLIEGFPRFGDKKRALRIVYGIERRVSRYLLSVTIINAG
LGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIAGVALSAAVAIVHYDHLTQALLVPALYLTATAIEGQLVTPIVLG
RRLELNTVSVFVTVIFWGWLWGIPGALVAVPFLVCIKVVCDNVESLHAVGNFLGARAPLPDLEQDTPE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=346, Percent_Identity=24.8554913294798, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1787885, Length=328, Percent_Identity=25.3048780487805, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788838, Length=342, Percent_Identity=25.7309941520468, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41720; Mature: 41720

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNERIGEAGTLLEPEAPDVPSENEISRLNHLIAIRRLLGIILLVLVVMGFYFARDVVLP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMIGLLLALTFSPVVRALQRIGIAPPITATALITALAAVIAVSAFLLSGPVSDWINQAPR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHH
LGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTVQRVAVQTPGILSSAVGSVASILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
TIIVTLVLALFLLASGDLFYIKLIEGFPRFGDKKRALRIVYGIERRVSRYLLSVTIINAG
HHHHHHHHHHHHHHCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIAGVALSAAVAIVHYDHLTQALLVP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALYLTATAIEGQLVTPIVLGRRLELNTVSVFVTVIFWGWLWGIPGALVAVPFLVCIKVVC
HHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DNVESLHAVGNFLGARAPLPDLEQDTPE
HCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQNERIGEAGTLLEPEAPDVPSENEISRLNHLIAIRRLLGIILLVLVVMGFYFARDVVLP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMIGLLLALTFSPVVRALQRIGIAPPITATALITALAAVIAVSAFLLSGPVSDWINQAPR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHH
LGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTVQRVAVQTPGILSSAVGSVASILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
TIIVTLVLALFLLASGDLFYIKLIEGFPRFGDKKRALRIVYGIERRVSRYLLSVTIINAG
HHHHHHHHHHHHHHCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIAGVALSAAVAIVHYDHLTQALLVP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALYLTATAIEGQLVTPIVLGRRLELNTVSVFVTVIFWGWLWGIPGALVAVPFLVCIKVVC
HHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DNVESLHAVGNFLGARAPLPDLEQDTPE
HCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]