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The map label for this gene is dppC [H]

Identifier: 77465044

GI number: 77465044

Start: 63731

End: 64624

Strand: Direct

Name: dppC [H]

Synonym: RSP_3031

Alternate gene names: 77465044

Gene position: 63731-64624 (Clockwise)

Preceding gene: 77465043

Following gene: 77465045

Centisome position: 6.76

GC content: 69.69

Gene sequence:

>894_bases
ATGTCCGACCTTCCCCTCGTCCGGCTGCCGGCGGCGTCGCCCGGGATCGCCACAGCTCTGGGGCATCTGCGGACCGTCCG
GCGCAACCCGGTGGGCGCGCTGTCGCTGACCTTCATCCTGGCTCTGATCGCGGTTGCGCTGTTTGCGCCCTGGATTGCGC
CCCACGATCCGACCGCCATCGCGCCGCGCCTGCGCATGCAGCCGCCCGGGCCGGGCCATTGGCTGGGCACCGACCAGCTG
GGGCGGGACGTGCTCAGCCGGCTGATCTTCGGGGCCCGCACCGCGCTGAAGGTGGCGATCACCGGCACGGTCGGGGCGCT
GTCGGCGGGGCTGGTGCTGGGCCTTGCCGCGGCGCTCGGGACGCGCTGGATCGACAGCGCGCTGGTGCTGATCAACGACT
CGCTCAAGGCGCTGCCGCTGGTGCTGTTCGCGCTGGTGCTGGTGTCGATCTACGGGCCGTCGCTGGCGATCCTCGTCACC
ATCATCACCCTCTCGATGGCGCCGGGCTATTTCCGCGTCGTGCGCAATCAGGCCCTGGTGCTGCGCAATGCGGATTACGT
CATCGCCGCCCGCGCGATGGGGGCCTCGCGGCTGCGGGTCGCGGTCAGCCATCTGCTGCCCAATCTGGTGGGGCCGCTTC
TGGTGCTGGTCGCAATGGATATCCCGGCGGTGATCGGCATCGAATCCGGTCTGTCCTTCCTCGGGCAGGGCGTCCAGCCG
CCGGAGTCGAGCTGGGGCACCATGCTGTCCGAGGGTTACACCTATCTGCGCCAGGCCCCGCATATCGCGCTGACCGCCGG
CCTGCCGATCATCCTGACCACAATCGCCTTCACCTTCTTTGGCGAAACGCTGCGGGACGCCCTCGATCCCCGCGCCGCAA
GAGGCCGCAAATGA

Upstream 100 bases:

>100_bases
GGCTCGGTCGTCGTGACCACCGCGCTCTATGTCACCGCCAATTTCCTCGCCGATGCGGCGATCGCCGCGCTCGATCCGCG
CGTGGCCAAGGAGAGCTGAG

Downstream 100 bases:

>100_bases
CCGCTGTTCTGTCGCTGAAAGAGGTCGGCATCCGCTACGATCCCGATCCCGCCGCAGCGCTCGCCGTGCGCAATGTGACG
CTGGAGGTTCATCCGGGCGA

Product: ABC peptide/opine transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSDLPLVRLPAASPGIATALGHLRTVRRNPVGALSLTFILALIAVALFAPWIAPHDPTAIAPRLRMQPPGPGHWLGTDQL
GRDVLSRLIFGARTALKVAITGTVGALSAGLVLGLAAALGTRWIDSALVLINDSLKALPLVLFALVLVSIYGPSLAILVT
IITLSMAPGYFRVVRNQALVLRNADYVIAARAMGASRLRVAVSHLLPNLVGPLLVLVAMDIPAVIGIESGLSFLGQGVQP
PESSWGTMLSEGYTYLRQAPHIALTAGLPIILTTIAFTFFGETLRDALDPRAARGRK

Sequences:

>Translated_297_residues
MSDLPLVRLPAASPGIATALGHLRTVRRNPVGALSLTFILALIAVALFAPWIAPHDPTAIAPRLRMQPPGPGHWLGTDQL
GRDVLSRLIFGARTALKVAITGTVGALSAGLVLGLAAALGTRWIDSALVLINDSLKALPLVLFALVLVSIYGPSLAILVT
IITLSMAPGYFRVVRNQALVLRNADYVIAARAMGASRLRVAVSHLLPNLVGPLLVLVAMDIPAVIGIESGLSFLGQGVQP
PESSWGTMLSEGYTYLRQAPHIALTAGLPIILTTIAFTFFGETLRDALDPRAARGRK
>Mature_296_residues
SDLPLVRLPAASPGIATALGHLRTVRRNPVGALSLTFILALIAVALFAPWIAPHDPTAIAPRLRMQPPGPGHWLGTDQLG
RDVLSRLIFGARTALKVAITGTVGALSAGLVLGLAAALGTRWIDSALVLINDSLKALPLVLFALVLVSIYGPSLAILVTI
ITLSMAPGYFRVVRNQALVLRNADYVIAARAMGASRLRVAVSHLLPNLVGPLLVLVAMDIPAVIGIESGLSFLGQGVQPP
ESSWGTMLSEGYTYLRQAPHIALTAGLPIILTTIAFTFFGETLRDALDPRAARGRK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=269, Percent_Identity=36.8029739776952, Blast_Score=177, Evalue=9e-46,
Organism=Escherichia coli, GI1787760, Length=273, Percent_Identity=35.8974358974359, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1789964, Length=271, Percent_Identity=38.7453874538745, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=36.0655737704918, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI1787498, Length=259, Percent_Identity=32.8185328185328, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787549, Length=278, Percent_Identity=30.2158273381295, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=31.2775330396476, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31296; Mature: 31164

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLPLVRLPAASPGIATALGHLRTVRRNPVGALSLTFILALIAVALFAPWIAPHDPTAI
CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APRLRMQPPGPGHWLGTDQLGRDVLSRLIFGARTALKVAITGTVGALSAGLVLGLAAALG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHH
TRWIDSALVLINDSLKALPLVLFALVLVSIYGPSLAILVTIITLSMAPGYFRVVRNQALV
HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCHHE
LRNADYVIAARAMGASRLRVAVSHLLPNLVGPLLVLVAMDIPAVIGIESGLSFLGQGVQP
EECCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PESSWGTMLSEGYTYLRQAPHIALTAGLPIILTTIAFTFFGETLRDALDPRAARGRK
CCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SDLPLVRLPAASPGIATALGHLRTVRRNPVGALSLTFILALIAVALFAPWIAPHDPTAI
CCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APRLRMQPPGPGHWLGTDQLGRDVLSRLIFGARTALKVAITGTVGALSAGLVLGLAAALG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHH
TRWIDSALVLINDSLKALPLVLFALVLVSIYGPSLAILVTIITLSMAPGYFRVVRNQALV
HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCHHE
LRNADYVIAARAMGASRLRVAVSHLLPNLVGPLLVLVAMDIPAVIGIESGLSFLGQGVQP
EECCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PESSWGTMLSEGYTYLRQAPHIALTAGLPIILTTIAFTFFGETLRDALDPRAARGRK
CCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]