| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is 77465016
Identifier: 77465016
GI number: 77465016
Start: 30279
End: 30704
Strand: Direct
Name: 77465016
Synonym: RSP_3834
Alternate gene names: NA
Gene position: 30279-30704 (Clockwise)
Preceding gene: 77465014
Following gene: 77465018
Centisome position: 3.21
GC content: 71.13
Gene sequence:
>426_bases ATGGGGCTGAAGCTGGAGGCGGCGGAGTTGGCCGCGTTCCTCGCGCGGGAGTTTCCCGAGGTCGCGGACGATTTCGAGGT GCTCTCGGCCGGGGAGGAGCTCGCGATGCGGCTCAAGGTGGGGCCGCAGCACCTGCGGCCGGGCGGCACGGTCTCGGGGC CTTCGATGTTCGCGCTGGCCGACGTGGCGATGTATCTGGCGATCCTGTCCCGCATCGGGCCGGTGAAACTGGCCGTCACC ACCAACATCTCGATGGATTTCCTGCGCAAGCCCGAGGCCGCGCGCGACCTGATCGGCACCGCGCGGATCCTGAAGCTCGG GCGGGTGCTGGCGGTGGGGGACGTGCTGATCCGCTCGGCGGGATCGGAGGCGGTGGTGGCGCGGGCGGGGCTGACCTATT CGATCCCGCCCGACCGCGCCGCCTGA
Upstream 100 bases:
>100_bases GTGGCCACCGCGCCGCGGTCCTCGCGCAGCAGGATCTGGGTCATCTTGTCACTCCTCCCCTTTGCGGTCAGCCTAGCGGG CCGGAAGCAGGGAGGAAAGC
Downstream 100 bases:
>100_bases CGGGCCTCAGTCCTTGGTGATCTTGAAGCGGCCGTCGATGGTGGCGCCGCTCTCGATCACGACGCTGCGATAGGTCACGT CCGAGGTGAGCTGCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Domain Protein; Thioesterase Protein; Thioesterase Superfamily; Phenylacetic Acid Degradation-Like Protein; PaaI Thioesterase Family Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MGLKLEAAELAAFLAREFPEVADDFEVLSAGEELAMRLKVGPQHLRPGGTVSGPSMFALADVAMYLAILSRIGPVKLAVT TNISMDFLRKPEAARDLIGTARILKLGRVLAVGDVLIRSAGSEAVVARAGLTYSIPPDRAA
Sequences:
>Translated_141_residues MGLKLEAAELAAFLAREFPEVADDFEVLSAGEELAMRLKVGPQHLRPGGTVSGPSMFALADVAMYLAILSRIGPVKLAVT TNISMDFLRKPEAARDLIGTARILKLGRVLAVGDVLIRSAGSEAVVARAGLTYSIPPDRAA >Mature_140_residues GLKLEAAELAAFLAREFPEVADDFEVLSAGEELAMRLKVGPQHLRPGGTVSGPSMFALADVAMYLAILSRIGPVKLAVTT NISMDFLRKPEAARDLIGTARILKLGRVLAVGDVLIRSAGSEAVVARAGLTYSIPPDRAA
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14873; Mature: 14741
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKLEAAELAAFLAREFPEVADDFEVLSAGEELAMRLKVGPQHLRPGGTVSGPSMFALA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHH DVAMYLAILSRIGPVKLAVTTNISMDFLRKPEAARDLIGTARILKLGRVLAVGDVLIRSA HHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSEAVVARAGLTYSIPPDRAA CCCEEEEECCCEEECCCCCCC >Mature Secondary Structure GLKLEAAELAAFLAREFPEVADDFEVLSAGEELAMRLKVGPQHLRPGGTVSGPSMFALA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHH DVAMYLAILSRIGPVKLAVTTNISMDFLRKPEAARDLIGTARILKLGRVLAVGDVLIRSA HHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSEAVVARAGLTYSIPPDRAA CCCEEEEECCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA