| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461917
Identifier: 77461917
GI number: 77461917
Start: 6383540
End: 6385753
Strand: Direct
Name: 77461917
Synonym: Pfl01_5697
Alternate gene names: NA
Gene position: 6383540-6385753 (Clockwise)
Preceding gene: 77461916
Following gene: 77461918
Centisome position: 99.15
GC content: 54.88
Gene sequence:
>2214_bases ATGAGCCAAACAAATTTTCTTATTGGTCGTGGCGAGCTCCTGACTCGGGACATAAAAGGCCCAAAAAGAAAGATGGACAA GGCAATTGCCTATACGCTCAGACGTGCCCGCGAGCGTCTTACAGGCCAGGCGCAGGTGGCTTCAGTGTCGCTGAACGAGC TTCCGCCAATTGCTTGTCCCCATGATTTTGGCGTAGCTCGCCTGGTTCTGAACCCGAGCTATATCGCTCGTTCCTATTTT CCAACCGACCTCTTGCGCGCCACTGGGCTGGAGTCAATCGGGAGTAGACGCATCCGGGTTACCCCAGAAAGCTGGACGCG CACGATCGAACCCCATGAGTGCGCGACTACCGAAATATTCGTTGCAGGCAAACGCAGTGCCTTCCGTGCGCTGAGCCATT GGATGGATGAGGTAGAGGAAGAGTCCGACGAAGCGGACGACCTCACTCATATAGAGAACATCTTTGCGTTTGAGCCGAAT GAACGCATCGTTGATCCCGGAACTGCAAACGACAAATATTATGAATTTGGCATCCACCTGCTGCCCGATCAGGACAGCTC CTTCATTCAGCAGGCGTTTATCGACTTCGCTGCCAAGTTTGAACTGATCGTCCATAGCGAATTGAGCTTCGAGGTGGGCA ATCTCTGGTTCGTACCTGTCGAGGGCGAGCAAAGTCATGCGCTGCAACTGGCACAGTTCGTTTTCGTTCGCGTGATCCGC CCCGTACCAAAGATGCGAGGCCTTCTGCCCTCCACTCGAAGGAGCGGCCCCTCGGTAAGCTGCACTCTGCCAACTCAAGC ACCTCTTTCGGCAGATCCGAGAGTAGCCATTCTCGATGCTGGTCTGCCGGCAGACCACACCATTGGAAAATGGCTACGAA ATTATCGTGTACTGGATGAACACGCCGGTGATGATCCACTGGGCCCAGAACACGGACTGGCAGCTACTTCAGCGTTTTTG TTTGGCCCTATTGAGCCCGAAGGCACCGCAGCACGCCCATACTCCTATGTCGACCATCTACGCGTGCTCGATGAAGGGGC AAGTCTTGAGCATCCATTGCAGCTCTATCGCACACTGGGTCATATCGAAGAGGTGCTGCTTTCGCGCCAATACGAATTCA TCAATCTCAGCGTGGGCCCCGACGTCGCCATCGAAGATAACGACGTGCACGCCTGGACATCGGTGATTGATGACCTGCTC AGTGATGGCAATACGTTCATGACCATCGCGGCGGGGAACAATGGAACACGGGACTCCATCGTTCAGCTGGATCGTGTACA GGTACCTTCTGACTGCGTAAACGCAATCACCGTGGGTGCAGCAAACTGCACCAGCGCCGCTTGGGCGCGCGCGCCTTACA GCGCTCGGGGCCCAGGTCGAAGCCCAGGCGTTATCAAGCCTGACCTCATGGCGTTCGGCGGCGGCAAACAGTACTTCCAC GCGCTGGCTCCTGGTTCCAAACCCTCACTGACACCGCTGCTAGGCACCAGTTTTGCTGCGCCCTACATCCTGCGCAGTGC GGTGGGTGTTCGTGCCGTACTAGGGCAAGAGCTGTCTGCACTGGCTATTAAAGCCTTGCTGGTGCATTCCGCCCAAATGA ATGGGCATGAACCCATCAATGTGGGTTGGGGCAAGGTTCCAGAAGACTTGATGGAAGTCATTACTTGCCCACCAGGCGTT GCGCGAATCGTTTACCAAGGCGAGTTGAGACCCGGCAAATACATCTGCGCCCCCATTCCACTTCCCGATGATGCTCTGAA AGGTATGGTGACCTTGAAGGCCACTTTTTCCTTCGCCAGCAGCACTGACCCCCAAGACTCCGCGTCCTACACTCGAGCAG GCTTGGAGGTGACTTTCAGGCCCAATAAAGACAAGGTTAAAGAGGGTAAAACCAGCGCCTCTACCAAGTCGTTTTTCGAG AAGAAGAAATTTGCCACCGAGGAAGAGCGACGCTCTGACTCCGGCAAATGGGAGACGGTTTTACATGACTCCAAGAGAAT GCGCGGCTCGACGCTCAACAACGCGACATTCGATATTCATTACAACGCGCGCGAAAAGGGTGGCAATGCCGGTAAAGCCG AGAAGATCAAATATGCGCTGATCATCACTGTGGAAGCGCCTAAGCACCCGGATCTCTATACGGACATTCTGAAGGCGTAT GCCGATACCTTGGTGCCGATTGAACCACAGGTTTCGCTGCCTATCCGGGTATAA
Upstream 100 bases:
>100_bases CGATTCAAGAAATTACTGGGATCAGTAGAGATACGATTCGCAAATATCGGAATGCAGAAAAAGCACCTGCCTCCGGTAGA TCAAGGACGAAAACTACCGC
Downstream 100 bases:
>100_bases CAGCAATTCAAAATCCCAGGCTTGTCATTGCAAGGATCGCATATGGATAAGTACATCGTTCTACGAAAAACCTTCGGTCA CACCAGCTCGATAAAGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 737; Mature: 736
Protein sequence:
>737_residues MSQTNFLIGRGELLTRDIKGPKRKMDKAIAYTLRRARERLTGQAQVASVSLNELPPIACPHDFGVARLVLNPSYIARSYF PTDLLRATGLESIGSRRIRVTPESWTRTIEPHECATTEIFVAGKRSAFRALSHWMDEVEEESDEADDLTHIENIFAFEPN ERIVDPGTANDKYYEFGIHLLPDQDSSFIQQAFIDFAAKFELIVHSELSFEVGNLWFVPVEGEQSHALQLAQFVFVRVIR PVPKMRGLLPSTRRSGPSVSCTLPTQAPLSADPRVAILDAGLPADHTIGKWLRNYRVLDEHAGDDPLGPEHGLAATSAFL FGPIEPEGTAARPYSYVDHLRVLDEGASLEHPLQLYRTLGHIEEVLLSRQYEFINLSVGPDVAIEDNDVHAWTSVIDDLL SDGNTFMTIAAGNNGTRDSIVQLDRVQVPSDCVNAITVGAANCTSAAWARAPYSARGPGRSPGVIKPDLMAFGGGKQYFH ALAPGSKPSLTPLLGTSFAAPYILRSAVGVRAVLGQELSALAIKALLVHSAQMNGHEPINVGWGKVPEDLMEVITCPPGV ARIVYQGELRPGKYICAPIPLPDDALKGMVTLKATFSFASSTDPQDSASYTRAGLEVTFRPNKDKVKEGKTSASTKSFFE KKKFATEEERRSDSGKWETVLHDSKRMRGSTLNNATFDIHYNAREKGGNAGKAEKIKYALIITVEAPKHPDLYTDILKAY ADTLVPIEPQVSLPIRV
Sequences:
>Translated_737_residues MSQTNFLIGRGELLTRDIKGPKRKMDKAIAYTLRRARERLTGQAQVASVSLNELPPIACPHDFGVARLVLNPSYIARSYF PTDLLRATGLESIGSRRIRVTPESWTRTIEPHECATTEIFVAGKRSAFRALSHWMDEVEEESDEADDLTHIENIFAFEPN ERIVDPGTANDKYYEFGIHLLPDQDSSFIQQAFIDFAAKFELIVHSELSFEVGNLWFVPVEGEQSHALQLAQFVFVRVIR PVPKMRGLLPSTRRSGPSVSCTLPTQAPLSADPRVAILDAGLPADHTIGKWLRNYRVLDEHAGDDPLGPEHGLAATSAFL FGPIEPEGTAARPYSYVDHLRVLDEGASLEHPLQLYRTLGHIEEVLLSRQYEFINLSVGPDVAIEDNDVHAWTSVIDDLL SDGNTFMTIAAGNNGTRDSIVQLDRVQVPSDCVNAITVGAANCTSAAWARAPYSARGPGRSPGVIKPDLMAFGGGKQYFH ALAPGSKPSLTPLLGTSFAAPYILRSAVGVRAVLGQELSALAIKALLVHSAQMNGHEPINVGWGKVPEDLMEVITCPPGV ARIVYQGELRPGKYICAPIPLPDDALKGMVTLKATFSFASSTDPQDSASYTRAGLEVTFRPNKDKVKEGKTSASTKSFFE KKKFATEEERRSDSGKWETVLHDSKRMRGSTLNNATFDIHYNAREKGGNAGKAEKIKYALIITVEAPKHPDLYTDILKAY ADTLVPIEPQVSLPIRV >Mature_736_residues SQTNFLIGRGELLTRDIKGPKRKMDKAIAYTLRRARERLTGQAQVASVSLNELPPIACPHDFGVARLVLNPSYIARSYFP TDLLRATGLESIGSRRIRVTPESWTRTIEPHECATTEIFVAGKRSAFRALSHWMDEVEEESDEADDLTHIENIFAFEPNE RIVDPGTANDKYYEFGIHLLPDQDSSFIQQAFIDFAAKFELIVHSELSFEVGNLWFVPVEGEQSHALQLAQFVFVRVIRP VPKMRGLLPSTRRSGPSVSCTLPTQAPLSADPRVAILDAGLPADHTIGKWLRNYRVLDEHAGDDPLGPEHGLAATSAFLF GPIEPEGTAARPYSYVDHLRVLDEGASLEHPLQLYRTLGHIEEVLLSRQYEFINLSVGPDVAIEDNDVHAWTSVIDDLLS DGNTFMTIAAGNNGTRDSIVQLDRVQVPSDCVNAITVGAANCTSAAWARAPYSARGPGRSPGVIKPDLMAFGGGKQYFHA LAPGSKPSLTPLLGTSFAAPYILRSAVGVRAVLGQELSALAIKALLVHSAQMNGHEPINVGWGKVPEDLMEVITCPPGVA RIVYQGELRPGKYICAPIPLPDDALKGMVTLKATFSFASSTDPQDSASYTRAGLEVTFRPNKDKVKEGKTSASTKSFFEK KKFATEEERRSDSGKWETVLHDSKRMRGSTLNNATFDIHYNAREKGGNAGKAEKIKYALIITVEAPKHPDLYTDILKAYA DTLVPIEPQVSLPIRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80887; Mature: 80755
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTNFLIGRGELLTRDIKGPKRKMDKAIAYTLRRARERLTGQAQVASVSLNELPPIACP CCCCCEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCC HDFGVARLVLNPSYIARSYFPTDLLRATGLESIGSRRIRVTPESWTRTIEPHECATTEIF CCCCEEEEEECHHHHHHHCCCHHHHHHCCHHHHCCCEEEECHHHHHCCCCCCCCCCEEEE VAGKRSAFRALSHWMDEVEEESDEADDLTHIENIFAFEPNERIVDPGTANDKYYEFGIHL EECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCEECCCCCCCCEEEEEEEE LPDQDSSFIQQAFIDFAAKFELIVHSELSFEVGNLWFVPVEGEQSHALQLAQFVFVRVIR ECCCCHHHHHHHHHHHHHHEEEEEECCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHH PVPKMRGLLPSTRRSGPSVSCTLPTQAPLSADPRVAILDAGLPADHTIGKWLRNYRVLDE CCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHHHH HAGDDPLGPEHGLAATSAFLFGPIEPEGTAARPYSYVDHLRVLDEGASLEHPLQLYRTLG CCCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH HIEEVLLSRQYEFINLSVGPDVAIEDNDVHAWTSVIDDLLSDGNTFMTIAAGNNGTRDSI HHHHHHHHCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH VQLDRVQVPSDCVNAITVGAANCTSAAWARAPYSARGPGRSPGVIKPDLMAFGGGKQYFH EEHHHCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHH ALAPGSKPSLTPLLGTSFAAPYILRSAVGVRAVLGQELSALAIKALLVHSAQMNGHEPIN EECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VGWGKVPEDLMEVITCPPGVARIVYQGELRPGKYICAPIPLPDDALKGMVTLKATFSFAS CCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHCCEEEEEEEEECCC STDPQDSASYTRAGLEVTFRPNKDKVKEGKTSASTKSFFEKKKFATEEERRSDSGKWETV CCCCCCCHHHHHCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCHHH LHDSKRMRGSTLNNATFDIHYNAREKGGNAGKAEKIKYALIITVEAPKHPDLYTDILKAY HHHHHHHCCCCCCCCEEEEEECHHHCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHH ADTLVPIEPQVSLPIRV HHHCCCCCCCCCCCCCC >Mature Secondary Structure SQTNFLIGRGELLTRDIKGPKRKMDKAIAYTLRRARERLTGQAQVASVSLNELPPIACP CCCCEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCC HDFGVARLVLNPSYIARSYFPTDLLRATGLESIGSRRIRVTPESWTRTIEPHECATTEIF CCCCEEEEEECHHHHHHHCCCHHHHHHCCHHHHCCCEEEECHHHHHCCCCCCCCCCEEEE VAGKRSAFRALSHWMDEVEEESDEADDLTHIENIFAFEPNERIVDPGTANDKYYEFGIHL EECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCEECCCCCCCCEEEEEEEE LPDQDSSFIQQAFIDFAAKFELIVHSELSFEVGNLWFVPVEGEQSHALQLAQFVFVRVIR ECCCCHHHHHHHHHHHHHHEEEEEECCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHH PVPKMRGLLPSTRRSGPSVSCTLPTQAPLSADPRVAILDAGLPADHTIGKWLRNYRVLDE CCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHHHH HAGDDPLGPEHGLAATSAFLFGPIEPEGTAARPYSYVDHLRVLDEGASLEHPLQLYRTLG CCCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH HIEEVLLSRQYEFINLSVGPDVAIEDNDVHAWTSVIDDLLSDGNTFMTIAAGNNGTRDSI HHHHHHHHCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH VQLDRVQVPSDCVNAITVGAANCTSAAWARAPYSARGPGRSPGVIKPDLMAFGGGKQYFH EEHHHCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHH ALAPGSKPSLTPLLGTSFAAPYILRSAVGVRAVLGQELSALAIKALLVHSAQMNGHEPIN EECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VGWGKVPEDLMEVITCPPGVARIVYQGELRPGKYICAPIPLPDDALKGMVTLKATFSFAS CCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHCCEEEEEEEEECCC STDPQDSASYTRAGLEVTFRPNKDKVKEGKTSASTKSFFEKKKFATEEERRSDSGKWETV CCCCCCCHHHHHCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCHHH LHDSKRMRGSTLNNATFDIHYNAREKGGNAGKAEKIKYALIITVEAPKHPDLYTDILKAY HHHHHHHCCCCCCCCEEEEEECHHHCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHH ADTLVPIEPQVSLPIRV HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA