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The map label for this gene is yrdA [C]

Identifier: 77461882

GI number: 77461882

Start: 6342436

End: 6342996

Strand: Direct

Name: yrdA [C]

Synonym: Pfl01_5662

Alternate gene names: 77461882

Gene position: 6342436-6342996 (Clockwise)

Preceding gene: 77461881

Following gene: 77461883

Centisome position: 98.51

GC content: 60.61

Gene sequence:

>561_bases
ATGATCCGTAAAAACCCTTCCGGTGATTTGCCGCAGATTGCCGAGTCTGCCTACGTCGATAAAACCGCGATCATCTGCGG
CAAAGTCGTCATCGGTGAAAACGTGTTCGTCGGCCCGTACGCGGTGATCCGCGCCGATGAAGTAGACGCCACGGGCGAGA
TGGAGCCGATCACCATCGGCGCCAATTCGAACATCCAGGACGGCGTGGTAATCCACTCCAAATCCGGCGCGGCGGTGACC
ATAGGCGAATTCAGCTCCATCGCCCACCGCTCGATCGTGCATGGCCCGTGTACGGTCGGCGATCGGGTGTTCATCGGCTT
CAACAGCGTGTTGTTCAACTGCGTGGTCGGCAATGGTTGCGTGGTGCGACACAACTCGGTGGTTGACGGTCGGGATCTGC
CGGACGCGTTCTACGTGCCCTCCACCACCCGCATCGGCCCGGGCACCGACCTCTCACAATTCCCGCCAGTGAGCGTCAGC
GCTTCGGAGTTTTCCGAAGACGTGGCGCGCACCAACGTCGACCTGGTGCGCGGCTACAAAGCCTTGCAGAACGAGTTCTG
A

Upstream 100 bases:

>100_bases
CGCTGTACTCCGACGCCCTCGCCGCCAGCGGCCCGGCCAGCACCTTTACCGGGCTGTTCGAATACAACCTCAACACCCTC
TACCAAGCCCTGAGCCAACC

Downstream 100 bases:

>100_bases
ATCATGAGCAGTGTGCTGATTCGCAATGCGCGGCTGGTGAACGAAGGGCGTGAGTTCGATGCCGATCTGTTGGTCAGCCA
CGGACGCATCGTCAAGATCG

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MIRKNPSGDLPQIAESAYVDKTAIICGKVVIGENVFVGPYAVIRADEVDATGEMEPITIGANSNIQDGVVIHSKSGAAVT
IGEFSSIAHRSIVHGPCTVGDRVFIGFNSVLFNCVVGNGCVVRHNSVVDGRDLPDAFYVPSTTRIGPGTDLSQFPPVSVS
ASEFSEDVARTNVDLVRGYKALQNEF

Sequences:

>Translated_186_residues
MIRKNPSGDLPQIAESAYVDKTAIICGKVVIGENVFVGPYAVIRADEVDATGEMEPITIGANSNIQDGVVIHSKSGAAVT
IGEFSSIAHRSIVHGPCTVGDRVFIGFNSVLFNCVVGNGCVVRHNSVVDGRDLPDAFYVPSTTRIGPGTDLSQFPPVSVS
ASEFSEDVARTNVDLVRGYKALQNEF
>Mature_186_residues
MIRKNPSGDLPQIAESAYVDKTAIICGKVVIGENVFVGPYAVIRADEVDATGEMEPITIGANSNIQDGVVIHSKSGAAVT
IGEFSSIAHRSIVHGPCTVGDRVFIGFNSVLFNCVVGNGCVVRHNSVVDGRDLPDAFYVPSTTRIGPGTDLSQFPPVSVS
ASEFSEDVARTNVDLVRGYKALQNEF

Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=136, Percent_Identity=32.3529411764706, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87081681, Length=177, Percent_Identity=27.1186440677966, Blast_Score=70, Evalue=7e-14,
Organism=Escherichia coli, GI1787667, Length=121, Percent_Identity=32.2314049586777, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 19712; Mature: 19712

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKNPSGDLPQIAESAYVDKTAIICGKVVIGENVFVGPYAVIRADEVDATGEMEPITIG
CCCCCCCCCCHHHHHHHHCCCHHEEEEEEEECCCEEECCEEEEEECCCCCCCCCCEEEEC
ANSNIQDGVVIHSKSGAAVTIGEFSSIAHRSIVHGPCTVGDRVFIGFNSVLFNCVVGNGC
CCCCCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEHHHHEEEEEECCCE
VVRHNSVVDGRDLPDAFYVPSTTRIGPGTDLSQFPPVSVSASEFSEDVARTNVDLVRGYK
EEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH
ALQNEF
HHHCCC
>Mature Secondary Structure
MIRKNPSGDLPQIAESAYVDKTAIICGKVVIGENVFVGPYAVIRADEVDATGEMEPITIG
CCCCCCCCCCHHHHHHHHCCCHHEEEEEEEECCCEEECCEEEEEECCCCCCCCCCEEEEC
ANSNIQDGVVIHSKSGAAVTIGEFSSIAHRSIVHGPCTVGDRVFIGFNSVLFNCVVGNGC
CCCCCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEHHHHEEEEEECCCE
VVRHNSVVDGRDLPDAFYVPSTTRIGPGTDLSQFPPVSVSASEFSEDVARTNVDLVRGYK
EEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH
ALQNEF
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041719; 8665839; 10924115 [H]