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The map label for this gene is vdlD [H]

Identifier: 77461869

GI number: 77461869

Start: 6332103

End: 6332585

Strand: Direct

Name: vdlD [H]

Synonym: Pfl01_5649

Alternate gene names: 77461869

Gene position: 6332103-6332585 (Clockwise)

Preceding gene: 77461867

Following gene: 77461871

Centisome position: 98.35

GC content: 60.66

Gene sequence:

>483_bases
ATGGAACCCGGAAACGCCCAGCTGTCGATGACGGTACTGATGACCCCCGACATGGCCAACTTCTCTGGCAATGTCCACGG
CGGCACCCTGCTCAAATACCTCGACGAAGTGGCCTACGCCTGCGCCAGCCGTTATGCCGGCCGCTACGTGGTGACCCTGT
CGGTGGATCAGGTGATTTTCCGCGAGCCGATCCATGTCGGCGAACTGGTGACCTTCCTGGCGTCGGTGAACTACACCGGC
AACACCTCAATGGAAGTCGGCATCAAAGTGGTGACCGAGAACATCCGCGAGCGCTCGGTGCGCCATACCAACAGCTGCTT
CTTCACCATGGTCGCGGTGGACGATCAACGCAAACCCGCCGCCGTACCGCCGCTGCAACCGCAGAACAGCGAAGACAAGC
GCCGCTACATGCAGGCACAACAACGCCGGCAGATCCGTCAGGAGCTGGAAAAGCGCTATCAGGAAATCAAGGGCGACGCC
TGA

Upstream 100 bases:

>100_bases
GCCAGTTGCCTGGCGTCCCGATAACGGTGCTTTTGAAAAGCGACCAGGCACCCGCAGAGGTGTTTCTTCCAGCAACCCTG
CCTTGACCCGTGAGAACGTT

Downstream 100 bases:

>100_bases
GTGAAAGCACGCTCGCGGACGTGGTCCGCGAGCGCTGCAATGATCAGAGGCTGATCGGCGTAGCCTCGAACTTCACCCGC
GGGTGCGCAATCCGGTCCTG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MEPGNAQLSMTVLMTPDMANFSGNVHGGTLLKYLDEVAYACASRYAGRYVVTLSVDQVIFREPIHVGELVTFLASVNYTG
NTSMEVGIKVVTENIRERSVRHTNSCFFTMVAVDDQRKPAAVPPLQPQNSEDKRRYMQAQQRRQIRQELEKRYQEIKGDA

Sequences:

>Translated_160_residues
MEPGNAQLSMTVLMTPDMANFSGNVHGGTLLKYLDEVAYACASRYAGRYVVTLSVDQVIFREPIHVGELVTFLASVNYTG
NTSMEVGIKVVTENIRERSVRHTNSCFFTMVAVDDQRKPAAVPPLQPQNSEDKRRYMQAQQRRQIRQELEKRYQEIKGDA
>Mature_160_residues
MEPGNAQLSMTVLMTPDMANFSGNVHGGTLLKYLDEVAYACASRYAGRYVVTLSVDQVIFREPIHVGELVTFLASVNYTG
NTSMEVGIKVVTENIRERSVRHTNSCFFTMVAVDDQRKPAAVPPLQPQNSEDKRRYMQAQQRRQIRQELEKRYQEIKGDA

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI18640736, Length=144, Percent_Identity=36.8055555555556, Blast_Score=86, Evalue=1e-17,
Organism=Homo sapiens, GI22165355, Length=144, Percent_Identity=35.4166666666667, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI22165400, Length=144, Percent_Identity=35.4166666666667, Blast_Score=85, Evalue=2e-17,
Organism=Homo sapiens, GI32528284, Length=148, Percent_Identity=31.7567567567568, Blast_Score=81, Evalue=3e-16,
Organism=Homo sapiens, GI32528286, Length=148, Percent_Identity=31.7567567567568, Blast_Score=81, Evalue=4e-16,
Organism=Homo sapiens, GI75709208, Length=152, Percent_Identity=31.5789473684211, Blast_Score=81, Evalue=4e-16,
Organism=Homo sapiens, GI32528282, Length=139, Percent_Identity=31.6546762589928, Blast_Score=81, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18117; Mature: 18117

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPGNAQLSMTVLMTPDMANFSGNVHGGTLLKYLDEVAYACASRYAGRYVVTLSVDQVIF
CCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHH
REPIHVGELVTFLASVNYTGNTSMEVGIKVVTENIRERSVRHTNSCFFTMVAVDDQRKPA
HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
AVPPLQPQNSEDKRRYMQAQQRRQIRQELEKRYQEIKGDA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEPGNAQLSMTVLMTPDMANFSGNVHGGTLLKYLDEVAYACASRYAGRYVVTLSVDQVIF
CCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHH
REPIHVGELVTFLASVNYTGNTSMEVGIKVVTENIRERSVRHTNSCFFTMVAVDDQRKPA
HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
AVPPLQPQNSEDKRRYMQAQQRRQIRQELEKRYQEIKGDA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]