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The map label for this gene is paiB [H]

Identifier: 77461854

GI number: 77461854

Start: 6310219

End: 6310872

Strand: Direct

Name: paiB [H]

Synonym: Pfl01_5634

Alternate gene names: 77461854

Gene position: 6310219-6310872 (Clockwise)

Preceding gene: 77461852

Following gene: 77461855

Centisome position: 98.01

GC content: 62.23

Gene sequence:

>654_bases
ATGCTGGCATTCGCCAAGGAAATTTTCTCCATGTACACGCCCCGCGCCTTTGCCATCGACGACCTGTCCCAACTGCACGA
ACTGATCCTCGCCACCCGCCTCGCCATATTGGTCACCCATGGCGAACAAGGCTTGCAGGCCAGTCATGTGCCAGTGCTGC
TGCATCGTGAACAAGGTCCGAACGGCACGCTGTACGGGCATCTGGCCAAGGCCAATCCGCAGTGGAAAGACCTGCGCGAC
GGCGCCGAGGCGATGGTGATTTTTCCCGGTGCCGATGCCTACGTCAGCCCGGGCTTTTACCCGAGCAAGGCCGAGCACGG
CAAAGTCGTGCCGACCTGGAACTACGTCGCTGTGCACGCCTACGGTCACGCCGAAACCTTCAGCGATGGCGGTCGGTTGC
TGGACATCGTCAGCACCCTCACCGACCGCCATGAAGCGGGTCGCGACCAGCCCTGGTCGGTCGACGATGCTCCGGCGGAT
TACATCGACGGCATGCTCAAGGCCATCGTCGGGTTCGCCATTCCGATCGACCGCCTCGAAGGCAAGCGCAAGCTCAGCCA
GAACCGCAGCGCCGAAGATATCGCCGGCGTACGCGAAGGCCTGGCCGCCAGCCCCGACATCAACGATCAAACCCTCGCTC
ACTTGATGCGTTAA

Upstream 100 bases:

>100_bases
GGGTTGAACGGCAGCGACAGCGTGGTCGAATCGGGCATGACAATGGACCTATGAAATTGGTCATCAATGGCTCTTACAAC
AGACCAATAGCCTGCCTACG

Downstream 100 bases:

>100_bases
GGAAATCACCATGAGTCAGATCGACATCCGCCCGGTCAGCGCCGCCGATCACGCGGCGTGGCTACCGCTGTGGCAGGCCT
ACCTGCGCTTCTACAACACG

Product: negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLAFAKEIFSMYTPRAFAIDDLSQLHELILATRLAILVTHGEQGLQASHVPVLLHREQGPNGTLYGHLAKANPQWKDLRD
GAEAMVIFPGADAYVSPGFYPSKAEHGKVVPTWNYVAVHAYGHAETFSDGGRLLDIVSTLTDRHEAGRDQPWSVDDAPAD
YIDGMLKAIVGFAIPIDRLEGKRKLSQNRSAEDIAGVREGLAASPDINDQTLAHLMR

Sequences:

>Translated_217_residues
MLAFAKEIFSMYTPRAFAIDDLSQLHELILATRLAILVTHGEQGLQASHVPVLLHREQGPNGTLYGHLAKANPQWKDLRD
GAEAMVIFPGADAYVSPGFYPSKAEHGKVVPTWNYVAVHAYGHAETFSDGGRLLDIVSTLTDRHEAGRDQPWSVDDAPAD
YIDGMLKAIVGFAIPIDRLEGKRKLSQNRSAEDIAGVREGLAASPDINDQTLAHLMR
>Mature_217_residues
MLAFAKEIFSMYTPRAFAIDDLSQLHELILATRLAILVTHGEQGLQASHVPVLLHREQGPNGTLYGHLAKANPQWKDLRD
GAEAMVIFPGADAYVSPGFYPSKAEHGKVVPTWNYVAVHAYGHAETFSDGGRLLDIVSTLTDRHEAGRDQPWSVDDAPAD
YIDGMLKAIVGFAIPIDRLEGKRKLSQNRSAEDIAGVREGLAASPDINDQTLAHLMR

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=108, Percent_Identity=35.1851851851852, Blast_Score=79, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23764; Mature: 23764

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFAKEIFSMYTPRAFAIDDLSQLHELILATRLAILVTHGEQGLQASHVPVLLHREQGP
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCC
NGTLYGHLAKANPQWKDLRDGAEAMVIFPGADAYVSPGFYPSKAEHGKVVPTWNYVAVHA
CCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
YGHAETFSDGGRLLDIVSTLTDRHEAGRDQPWSVDDAPADYIDGMLKAIVGFAIPIDRLE
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
GKRKLSQNRSAEDIAGVREGLAASPDINDQTLAHLMR
HHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHC
>Mature Secondary Structure
MLAFAKEIFSMYTPRAFAIDDLSQLHELILATRLAILVTHGEQGLQASHVPVLLHREQGP
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCC
NGTLYGHLAKANPQWKDLRDGAEAMVIFPGADAYVSPGFYPSKAEHGKVVPTWNYVAVHA
CCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
YGHAETFSDGGRLLDIVSTLTDRHEAGRDQPWSVDDAPADYIDGMLKAIVGFAIPIDRLE
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
GKRKLSQNRSAEDIAGVREGLAASPDINDQTLAHLMR
HHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]