Click here to switch to the map view.

The map label for this gene is elbB [H]

Identifier: 77461689

GI number: 77461689

Start: 6136250

End: 6136918

Strand: Direct

Name: elbB [H]

Synonym: Pfl01_5468

Alternate gene names: 77461689

Gene position: 6136250-6136918 (Clockwise)

Preceding gene: 77461687

Following gene: 77461692

Centisome position: 95.31

GC content: 62.63

Gene sequence:

>669_bases
ATGAGCAAAAAAGTTGCAGTGATCCTGTCCGGTTGCGGCGTGTACGACGGCGCCGAGATCTACGAGAGCGTTATCACCCT
TTTGCGCCTCGACCAGCGCGGCGCTCAGGTGCAGTGCTTCGCCCCGAACATCGCGCAATTGCATGTAATCAACCACCTGA
CCGGTGAAGAGATGCCCGAATCGCGCAACGTGCTGGTGGAATCGGCACGCATCGCCCGGGGCGACGTCAAGGATCTGCGC
GAGGCCGATGTCGAGGATTTCGATGCGCTGATCGTGCCCGGTGGTTTCGGTGCGGCGAAGAACCTGTCGAACTTCGCCAT
CGAAGGCGCCGGCTGCACCGTGCAGCCGCAAGTGCTGGCGCTGGCCGAAGCCTTTGCCGAAGCGGGCAAACCAGTGGGTC
TGATCTGCATCTCGCCGGCGCTGGCCGCGAAGATCTATGGCCCGGGCGTGACCTGCACCATCGGCAACGACGCCGACACA
GCCGCCGTCATGAACAAGATGGGCGCCACCCACGAAGACTGCGCGGTGACCGACATCATCGAAGACAAGGCGCGCAAACT
GGTGACCACCCCGGCGTACATGCTGGCGCAGACGATCAGCGAGGCGGCTTCGGGGATCAACAAGCTGGTGGATCGGGTGT
TGGAACTGACCCACGAAAACGACGCCTGA

Upstream 100 bases:

>100_bases
GAATCTGTAGCACAGATCCTAGGTGTAGCCGCGGCTTGATCCTATGGCAACGAACGACAAATTAGAGGACATTTAACGCC
ATGAATCTGGAGAGAAACCC

Downstream 100 bases:

>100_bases
CTGGCGGCGCTGATCGTTTCCGCGCAGAGCGTGGGAACGATCAAAGACTCAGGATTGGCGCGCCAGCCGCGTCAGTATCC
GGTCCAGCGCATTAGCGAAC

Product: isoprenoid biosynthesis protein

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSKKVAVILSGCGVYDGAEIYESVITLLRLDQRGAQVQCFAPNIAQLHVINHLTGEEMPESRNVLVESARIARGDVKDLR
EADVEDFDALIVPGGFGAAKNLSNFAIEGAGCTVQPQVLALAEAFAEAGKPVGLICISPALAAKIYGPGVTCTIGNDADT
AAVMNKMGATHEDCAVTDIIEDKARKLVTTPAYMLAQTISEAASGINKLVDRVLELTHENDA

Sequences:

>Translated_222_residues
MSKKVAVILSGCGVYDGAEIYESVITLLRLDQRGAQVQCFAPNIAQLHVINHLTGEEMPESRNVLVESARIARGDVKDLR
EADVEDFDALIVPGGFGAAKNLSNFAIEGAGCTVQPQVLALAEAFAEAGKPVGLICISPALAAKIYGPGVTCTIGNDADT
AAVMNKMGATHEDCAVTDIIEDKARKLVTTPAYMLAQTISEAASGINKLVDRVLELTHENDA
>Mature_221_residues
SKKVAVILSGCGVYDGAEIYESVITLLRLDQRGAQVQCFAPNIAQLHVINHLTGEEMPESRNVLVESARIARGDVKDLRE
ADVEDFDALIVPGGFGAAKNLSNFAIEGAGCTVQPQVLALAEAFAEAGKPVGLICISPALAAKIYGPGVTCTIGNDADTA
AVMNKMGATHEDCAVTDIIEDKARKLVTTPAYMLAQTISEAASGINKLVDRVLELTHENDA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=227, Percent_Identity=47.136563876652, Blast_Score=195, Evalue=3e-50,
Organism=Homo sapiens, GI296531408, Length=227, Percent_Identity=41.4096916299559, Blast_Score=152, Evalue=3e-37,
Organism=Escherichia coli, GI87082228, Length=214, Percent_Identity=61.214953271028, Blast_Score=266, Evalue=8e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23381; Mature: 23250

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKVAVILSGCGVYDGAEIYESVITLLRLDQRGAQVQCFAPNIAQLHVINHLTGEEMPE
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCC
SRNVLVESARIARGDVKDLREADVEDFDALIVPGGFGAAKNLSNFAIEGAGCTVQPQVLA
CHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCHHEECCCCCCCCHHHHH
LAEAFAEAGKPVGLICISPALAAKIYGPGVTCTIGNDADTAAVMNKMGATHEDCAVTDII
HHHHHHHCCCCEEEEEECHHHHHHEECCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHH
EDKARKLVTTPAYMLAQTISEAASGINKLVDRVLELTHENDA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKKVAVILSGCGVYDGAEIYESVITLLRLDQRGAQVQCFAPNIAQLHVINHLTGEEMPE
CCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCC
SRNVLVESARIARGDVKDLREADVEDFDALIVPGGFGAAKNLSNFAIEGAGCTVQPQVLA
CHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCHHEECCCCCCCCHHHHH
LAEAFAEAGKPVGLICISPALAAKIYGPGVTCTIGNDADTAAVMNKMGATHEDCAVTDII
HHHHHHHCCCCEEEEEECHHHHHHEECCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHH
EDKARKLVTTPAYMLAQTISEAASGINKLVDRVLELTHENDA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]