| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ppx [H]
Identifier: 77461684
GI number: 77461684
Start: 6129227
End: 6130729
Strand: Direct
Name: ppx [H]
Synonym: Pfl01_5463
Alternate gene names: 77461684
Gene position: 6129227-6130729 (Clockwise)
Preceding gene: 77461683
Following gene: 77461687
Centisome position: 95.2
GC content: 63.07
Gene sequence:
>1503_bases ATGCCGCAATCCCAAGCCAAGAATCTGTCCCTGATCGCCGCGATCGACCTGGGCTCCAACAGCTTCCATATGGTCGTGGC CAAGGCCCAGAACGGCGAAATCCGTATTCTCGAACGGCTCGGGGAAAAGGTTCAGCTGGCCGCCGGCATCGACGATGAGC GCCAGCTCAACGAAGAATCCATGCAGCGCGGGCTCGACTGCCTCAAGCGCTTTGCCCAACTGATCAACGGCATGCCGCTG GGCGCCGTGCGGATCGTCGGTACCAACGCCCTGCGCGAGGCGCGCAACCGTGGCGAATTCATCCGCCGTGCCGAAGAAAT CCTCGGCCATCCGGTGGAAGTCATCTCCGGCCGTGAAGAGGCCCGCCTGATCTACCTCGGCGTGTCCCACACCCTCGCCG ACACCCCGGGCAAACGCCTGGTCGCCGACATCGGCGGCGGCAGTACCGAATTCATCATCGGCCAGCGTTTCGAACCGCTG CTGCGCGAAAGCCTGCAAATGGGCTGCGTGAGCTTCACCCAGCGCTATTTCAAGGACGGCAAAATCACCCCGGCCCGCTA CGCCCAGGCCTACACGGCGGCGCGGCTGGAAATCATGAGCATCGAACACGCCTTGCATCGCCTGACCTGGGATGAAGCCA TCGGCTCCTCGGGCACCATCCGCGCCATCGGCCTGGCGCTGAAGGCCGGCGGTCACGGCACCGGCGAAGTGAATGCCGAA GGTCTGGCGTGGCTCAAGCGTCGCCTGTTCAAGCTCGGCGATGTCGACAAGATCGATTTCGAAGGCATCAAGCCGGATCG TCGGGCGATCTTCCCGGCCGGTCTGGCGATTCTCGAAGCGATCTTCGACGCCCTCGAACTGCAACGCATGGATCACTGCG AAGGCGCGCTGCGTGAAGGCGTACTTTACGACCTGCTCGGCCGCCATCACCACGAAGACGTGCGCGAACGTACTCTGACC TCGCTGATGGAGCGCTACCACGTCGACCTCGAACAGGCCGCGCGGGTCGAGCGCAAAGCCCTGCACGCGTTCGATCAAGT GGCCGTGGACTGGGAGCTGGACGACGGTATCTGGCGCGAACTGCTGGGCTGGGCGGCGAAAGTGCACGAAGTCGGGCTCG ACATCGCTCACTATCACTACCATAAGCACGGTGCCTACCTGATCGAACACTCGGACCTCGCCGGGTTCTCCCGCGAAGAC CAGCAGATGCTTGCGCTGCTGGTGCGTGGCCACCGCCGCAACATCCCCAAGGACAAGTTCGCCGAGTTCGGAGACGACGG CGACAAGCTGATCCGTCTGTGTGTGCTGCTGCGTTTCGCCATCCTGTTCCACCACATTCGTGGCACCCAGGCGATGCCGC AGGTTGCGCTGCATGCCAACGGCGACAACCTCGATGTGGAGTTTCCGGAGAACTGGCTGGATGAAAACCAGCTGACCCAG GCGGATTTCGGGCTTGAGGCCGAATGGCTGACGCGGGTGGGGATTGTCCTGACCGTGCATTGA
Upstream 100 bases:
>100_bases TGAGACTTTATGCGCTGAATCAAGGGTTTGAACCATGCGCGTTGGCGGCAGCGTTTGATCGTGGCACGATGTCGGGGTTA TCGACCGAGACCCCCTGACC
Downstream 100 bases:
>100_bases GTAACGGGCAGGCACAAAAAAGGCGATCCGGATGGATCGCCTTTTTTATGGCTATGAAACCTGCGGTCAGCTGCTCACCG GCAGAATCGGGCTGCCCAAT
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MPQSQAKNLSLIAAIDLGSNSFHMVVAKAQNGEIRILERLGEKVQLAAGIDDERQLNEESMQRGLDCLKRFAQLINGMPL GAVRIVGTNALREARNRGEFIRRAEEILGHPVEVISGREEARLIYLGVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPL LRESLQMGCVSFTQRYFKDGKITPARYAQAYTAARLEIMSIEHALHRLTWDEAIGSSGTIRAIGLALKAGGHGTGEVNAE GLAWLKRRLFKLGDVDKIDFEGIKPDRRAIFPAGLAILEAIFDALELQRMDHCEGALREGVLYDLLGRHHHEDVRERTLT SLMERYHVDLEQAARVERKALHAFDQVAVDWELDDGIWRELLGWAAKVHEVGLDIAHYHYHKHGAYLIEHSDLAGFSRED QQMLALLVRGHRRNIPKDKFAEFGDDGDKLIRLCVLLRFAILFHHIRGTQAMPQVALHANGDNLDVEFPENWLDENQLTQ ADFGLEAEWLTRVGIVLTVH
Sequences:
>Translated_500_residues MPQSQAKNLSLIAAIDLGSNSFHMVVAKAQNGEIRILERLGEKVQLAAGIDDERQLNEESMQRGLDCLKRFAQLINGMPL GAVRIVGTNALREARNRGEFIRRAEEILGHPVEVISGREEARLIYLGVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPL LRESLQMGCVSFTQRYFKDGKITPARYAQAYTAARLEIMSIEHALHRLTWDEAIGSSGTIRAIGLALKAGGHGTGEVNAE GLAWLKRRLFKLGDVDKIDFEGIKPDRRAIFPAGLAILEAIFDALELQRMDHCEGALREGVLYDLLGRHHHEDVRERTLT SLMERYHVDLEQAARVERKALHAFDQVAVDWELDDGIWRELLGWAAKVHEVGLDIAHYHYHKHGAYLIEHSDLAGFSRED QQMLALLVRGHRRNIPKDKFAEFGDDGDKLIRLCVLLRFAILFHHIRGTQAMPQVALHANGDNLDVEFPENWLDENQLTQ ADFGLEAEWLTRVGIVLTVH >Mature_499_residues PQSQAKNLSLIAAIDLGSNSFHMVVAKAQNGEIRILERLGEKVQLAAGIDDERQLNEESMQRGLDCLKRFAQLINGMPLG AVRIVGTNALREARNRGEFIRRAEEILGHPVEVISGREEARLIYLGVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPLL RESLQMGCVSFTQRYFKDGKITPARYAQAYTAARLEIMSIEHALHRLTWDEAIGSSGTIRAIGLALKAGGHGTGEVNAEG LAWLKRRLFKLGDVDKIDFEGIKPDRRAIFPAGLAILEAIFDALELQRMDHCEGALREGVLYDLLGRHHHEDVRERTLTS LMERYHVDLEQAARVERKALHAFDQVAVDWELDDGIWRELLGWAAKVHEVGLDIAHYHYHKHGAYLIEHSDLAGFSREDQ QMLALLVRGHRRNIPKDKFAEFGDDGDKLIRLCVLLRFAILFHHIRGTQAMPQVALHANGDNLDVEFPENWLDENQLTQA DFGLEAEWLTRVGIVLTVH
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=492, Percent_Identity=40.8536585365854, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI48994966, Length=501, Percent_Identity=39.3213572854291, Blast_Score=341, Evalue=7e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 56183; Mature: 56052
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSQAKNLSLIAAIDLGSNSFHMVVAKAQNGEIRILERLGEKVQLAAGIDDERQLNEES CCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHCCCCEEEECCCCHHHHCCHHH MQRGLDCLKRFAQLINGMPLGAVRIVGTNALREARNRGEFIRRAEEILGHPVEVISGREE HHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC ARLIYLGVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPLLRESLQMGCVSFTQRYFKDG CEEEEEECCHHHCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC KITPARYAQAYTAARLEIMSIEHALHRLTWDEAIGSSGTIRAIGLALKAGGHGTGEVNAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHH GLAWLKRRLFKLGDVDKIDFEGIKPDRRAIFPAGLAILEAIFDALELQRMDHCEGALREG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLYDLLGRHHHEDVRERTLTSLMERYHVDLEQAARVERKALHAFDQVAVDWELDDGIWRE HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCHHHHHH LLGWAAKVHEVGLDIAHYHYHKHGAYLIEHSDLAGFSREDQQMLALLVRGHRRNIPKDKF HHHHHHHHHHHCCHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHH AEFGDDGDKLIRLCVLLRFAILFHHIRGTQAMPQVALHANGDNLDVEFPENWLDENQLTQ HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCHHHCCCCCCCH ADFGLEAEWLTRVGIVLTVH HHCCCCHHHHHHCCEEEEEC >Mature Secondary Structure PQSQAKNLSLIAAIDLGSNSFHMVVAKAQNGEIRILERLGEKVQLAAGIDDERQLNEES CCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHCCCCEEEECCCCHHHHCCHHH MQRGLDCLKRFAQLINGMPLGAVRIVGTNALREARNRGEFIRRAEEILGHPVEVISGREE HHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC ARLIYLGVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPLLRESLQMGCVSFTQRYFKDG CEEEEEECCHHHCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC KITPARYAQAYTAARLEIMSIEHALHRLTWDEAIGSSGTIRAIGLALKAGGHGTGEVNAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHH GLAWLKRRLFKLGDVDKIDFEGIKPDRRAIFPAGLAILEAIFDALELQRMDHCEGALREG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLYDLLGRHHHEDVRERTLTSLMERYHVDLEQAARVERKALHAFDQVAVDWELDDGIWRE HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCHHHHHH LLGWAAKVHEVGLDIAHYHYHKHGAYLIEHSDLAGFSREDQQMLALLVRGHRRNIPKDKF HHHHHHHHHHHCCHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHH AEFGDDGDKLIRLCVLLRFAILFHHIRGTQAMPQVALHANGDNLDVEFPENWLDENQLTQ HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCHHHCCCCCCCH ADFGLEAEWLTRVGIVLTVH HHCCCCHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]