| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is qor [H]
Identifier: 77461666
GI number: 77461666
Start: 6111533
End: 6112510
Strand: Direct
Name: qor [H]
Synonym: Pfl01_5445
Alternate gene names: 77461666
Gene position: 6111533-6112510 (Clockwise)
Preceding gene: 77461664
Following gene: 255961283
Centisome position: 94.92
GC content: 64.62
Gene sequence:
>978_bases ATGAAAGCCGTGCTGTGCAAAGCCTTCGGCCCTGCCGAATCGCTGGTGCTGGAAGACGTCGCCAGTCCTGTCGCCAAGAA GAACGAAATCCTGCTGGACGTGCACGCCGCCGGGGTCAACTTCCCGGACACGCTGATCATCGAGGGCAAATACCAGTTCA AGCCGCCCTTCCCGTTCTCGCCCGGTGGCGAGGCCGCCGGCGTGGTCAGCGAAGTGGGTGAAAAGGTCAGTCACCTGAAA GTCGGCGACCGGGTCATGGCCCTGACCGGCTGGGGCAGCTTCGCCGAGCAGGTCGCAGTGCCGGGCTATAACGTGCTGCC AATCCCGCCCTCGATGGATTTCAACACCGCCGCCGCGTTCAGCATGACCTACGGCACGTCGATGCACGCCCTCAAGCAGC GCGGCAACCTGCAACCGGGCGAAACCCTGTTGGTGCTTGGTGCTTCCGGTGGTGTTGGCCTGGCCGCCGTGGAAATCGGC AAAGCCATGGGCGCCCGGGTGATTGCCGCCGCCAGCAGCGCGGAAAAACTTGCCGTGGCCAAGGCTGCCGGTGCCGACGA ACTGATCAACTACAGCGAAACCAGCCTCAAGGACGAAATCAAGCGCCTGACCGACGGCCAGGGCGCCGACGTGATCTACG ACCCGGTCGGCGGCGACCTGTTCGACCAGGCCATCCGCGCCATCGCCTGGAACGGCCGCCTGCTGGTAGTCGGTTTCGCC AGCGGACGCATTCCCGAACTGCCGGTCAACCTCGCTCTGCTCAAGGGCGCGGCGGTACTCGGCGTGTTCTGGGGCTCCTT CGCCCAACGCCAGCCACAGGACAACGCGGCGAACTTCCAGCAACTGTTCGGCTGGTTCGCTGAGGGCAAGCTGAAGCCGC TGGTGTCGCAGGTCTATCCGCTGGGCAATGCCGCGCAGGCGATCAATGATCTCGGGCAGCGCAAGGCTGTCGGGAAAGTT GTGGTGCAAGTGCGCTGA
Upstream 100 bases:
>100_bases GCACAAGCTTATGGCGGACTATCAGGGCCGGGCATGCTCGTTGACCCGTTGACTGCCACACCTACACTTATCGGCCATCA CTCCCAAAGGAATAGCCCTG
Downstream 100 bases:
>100_bases GCCTGAACCCTCCCAAGGCCAGAACCGCGGAACTAGCGGTTCTGACCTTTTTTATATCAATGAAAAGTAGCCACACATTT ATTCAACGACTTGGTGGTAT
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKAVLCKAFGPAESLVLEDVASPVAKKNEILLDVHAAGVNFPDTLIIEGKYQFKPPFPFSPGGEAAGVVSEVGEKVSHLK VGDRVMALTGWGSFAEQVAVPGYNVLPIPPSMDFNTAAAFSMTYGTSMHALKQRGNLQPGETLLVLGASGGVGLAAVEIG KAMGARVIAAASSAEKLAVAKAAGADELINYSETSLKDEIKRLTDGQGADVIYDPVGGDLFDQAIRAIAWNGRLLVVGFA SGRIPELPVNLALLKGAAVLGVFWGSFAQRQPQDNAANFQQLFGWFAEGKLKPLVSQVYPLGNAAQAINDLGQRKAVGKV VVQVR
Sequences:
>Translated_325_residues MKAVLCKAFGPAESLVLEDVASPVAKKNEILLDVHAAGVNFPDTLIIEGKYQFKPPFPFSPGGEAAGVVSEVGEKVSHLK VGDRVMALTGWGSFAEQVAVPGYNVLPIPPSMDFNTAAAFSMTYGTSMHALKQRGNLQPGETLLVLGASGGVGLAAVEIG KAMGARVIAAASSAEKLAVAKAAGADELINYSETSLKDEIKRLTDGQGADVIYDPVGGDLFDQAIRAIAWNGRLLVVGFA SGRIPELPVNLALLKGAAVLGVFWGSFAQRQPQDNAANFQQLFGWFAEGKLKPLVSQVYPLGNAAQAINDLGQRKAVGKV VVQVR >Mature_325_residues MKAVLCKAFGPAESLVLEDVASPVAKKNEILLDVHAAGVNFPDTLIIEGKYQFKPPFPFSPGGEAAGVVSEVGEKVSHLK VGDRVMALTGWGSFAEQVAVPGYNVLPIPPSMDFNTAAAFSMTYGTSMHALKQRGNLQPGETLLVLGASGGVGLAAVEIG KAMGARVIAAASSAEKLAVAKAAGADELINYSETSLKDEIKRLTDGQGADVIYDPVGGDLFDQAIRAIAWNGRLLVVGFA SGRIPELPVNLALLKGAAVLGVFWGSFAQRQPQDNAANFQQLFGWFAEGKLKPLVSQVYPLGNAAQAINDLGQRKAVGKV VVQVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=327, Percent_Identity=34.5565749235474, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI13236495, Length=327, Percent_Identity=34.5565749235474, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI18379349, Length=320, Percent_Identity=32.5, Blast_Score=158, Evalue=7e-39, Organism=Homo sapiens, GI194239676, Length=327, Percent_Identity=33.0275229357798, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=30, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=30, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI24308257, Length=349, Percent_Identity=26.9340974212034, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI28557745, Length=331, Percent_Identity=31.7220543806647, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI41872631, Length=301, Percent_Identity=29.2358803986711, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI47519420, Length=362, Percent_Identity=28.4530386740331, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI197927207, Length=198, Percent_Identity=31.8181818181818, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI67078404, Length=308, Percent_Identity=25.3246753246753, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI67078406, Length=283, Percent_Identity=26.5017667844523, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1790485, Length=299, Percent_Identity=34.4481605351171, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI226510941, Length=287, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI1789651, Length=267, Percent_Identity=28.4644194756554, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081918, Length=335, Percent_Identity=27.1641791044776, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17507255, Length=329, Percent_Identity=30.6990881458967, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17562876, Length=288, Percent_Identity=29.8611111111111, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17536829, Length=296, Percent_Identity=28.0405405405405, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI212642053, Length=313, Percent_Identity=25.8785942492013, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI133901712, Length=295, Percent_Identity=25.7627118644068, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI133901710, Length=295, Percent_Identity=25.7627118644068, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=333, Percent_Identity=28.8288288288288, Blast_Score=132, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6319621, Length=339, Percent_Identity=25.3687315634218, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6324486, Length=339, Percent_Identity=25.0737463126844, Blast_Score=83, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323961, Length=339, Percent_Identity=24.4837758112094, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6323801, Length=333, Percent_Identity=25.5255255255255, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI19920632, Length=316, Percent_Identity=27.2151898734177, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI221330659, Length=316, Percent_Identity=27.2151898734177, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581345, Length=310, Percent_Identity=25.8064516129032, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI45550423, Length=303, Percent_Identity=26.4026402640264, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34041; Mature: 34041
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVLCKAFGPAESLVLEDVASPVAKKNEILLDVHAAGVNFPDTLIIEGKYQFKPPFPFS CCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECEEEECCCCCCC PGGEAAGVVSEVGEKVSHLKVGDRVMALTGWGSFAEQVAVPGYNVLPIPPSMDFNTAAAF CCCCHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHCCCCCCEEECCCCCCCCCCEEE SMTYGTSMHALKQRGNLQPGETLLVLGASGGVGLAAVEIGKAMGARVIAAASSAEKLAVA EEECCCHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHH KAAGADELINYSETSLKDEIKRLTDGQGADVIYDPVGGDLFDQAIRAIAWNGRLLVVGFA HHCCHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEEC SGRIPELPVNLALLKGAAVLGVFWGSFAQRQPQDNAANFQQLFGWFAEGKLKPLVSQVYP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC LGNAAQAINDLGQRKAVGKVVVQVR CCHHHHHHHHHHHHHHHEEEEEEEC >Mature Secondary Structure MKAVLCKAFGPAESLVLEDVASPVAKKNEILLDVHAAGVNFPDTLIIEGKYQFKPPFPFS CCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECEEEECCCCCCC PGGEAAGVVSEVGEKVSHLKVGDRVMALTGWGSFAEQVAVPGYNVLPIPPSMDFNTAAAF CCCCHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHCCCCCCEEECCCCCCCCCCEEE SMTYGTSMHALKQRGNLQPGETLLVLGASGGVGLAAVEIGKAMGARVIAAASSAEKLAVA EEECCCHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHH KAAGADELINYSETSLKDEIKRLTDGQGADVIYDPVGGDLFDQAIRAIAWNGRLLVVGFA HHCCHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEEC SGRIPELPVNLALLKGAAVLGVFWGSFAQRQPQDNAANFQQLFGWFAEGKLKPLVSQVYP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC LGNAAQAINDLGQRKAVGKVVVQVR CCHHHHHHHHHHHHHHHEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]