| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461661
Identifier: 77461661
GI number: 77461661
Start: 6105585
End: 6106034
Strand: Direct
Name: 77461661
Synonym: Pfl01_5440
Alternate gene names: NA
Gene position: 6105585-6106034 (Clockwise)
Preceding gene: 77461659
Following gene: 77461662
Centisome position: 94.83
GC content: 60.22
Gene sequence:
>450_bases ATGGCCTACTGGCTGATGAAATCCGAGCCCGACGAGCTCTCGATCAAGGGCCTGGAAAAGCTCGGCAAGGCGCGCTGGGA CGGGGTTCGCAACTATCAGGCACGCAATTTCCTGCGGGCCATGGCGGTGGGGGACGAATTCTTTTTCTACCACTCCAGCT GCCCGGAGCCGGGAATTGCCGGAATCGGCAAAATAATCGAAGCCGCGTACCCGGATCCCACCGCACTGGAACCGCAAAGC CATTACTACGACCCGAAAGCCACCCCGGATAAAAACCCCTGGAGCGCGATTGATGTCGCCCACGTCGAAACTTTCAGCCG GGTCTTGAAGCTGGATTATCTGAAACAGCAGACCGCGTTGGCCGAGATGCCGCTGGTGCAGAAGGGCTCGCGACTGTCGG TGATGCCGGTGACGGCCGAGCAGTGGGCGGCAGTACTCGGTTTGCGCTGA
Upstream 100 bases:
>100_bases ACAACGTGAACCTCTGCGCAAATGCTGACGTCAACCGACCGTCGGTTTGTCATAAAATTGCCGGACAACCTGCCCAATGA CCGCTTGAGGAGCACACACC
Downstream 100 bases:
>100_bases GAGGCGTTGCCCCTTGCGGCTGACATGGCTCAGCGCTGCCTGCGTCGCCGATCATTTGACAGACATCAAGCGATGCCATC GCTTTACCCGTCAGACTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIAGIGKIIEAAYPDPTALEPQS HYYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTALAEMPLVQKGSRLSVMPVTAEQWAAVLGLR
Sequences:
>Translated_149_residues MAYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIAGIGKIIEAAYPDPTALEPQS HYYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTALAEMPLVQKGSRLSVMPVTAEQWAAVLGLR >Mature_148_residues AYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIAGIGKIIEAAYPDPTALEPQSH YYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTALAEMPLVQKGSRLSVMPVTAEQWAAVLGLR
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=166, Percent_Identity=44.578313253012, Blast_Score=132, Evalue=1e-31, Organism=Homo sapiens, GI40806221, Length=166, Percent_Identity=44.578313253012, Blast_Score=132, Evalue=1e-31, Organism=Homo sapiens, GI7661804, Length=166, Percent_Identity=44.578313253012, Blast_Score=132, Evalue=1e-31, Organism=Homo sapiens, GI83267859, Length=105, Percent_Identity=52.3809523809524, Blast_Score=112, Evalue=1e-25, Organism=Homo sapiens, GI40806219, Length=105, Percent_Identity=52.3809523809524, Blast_Score=112, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16744; Mature: 16613
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIA CEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCHH GIGKIIEAAYPDPTALEPQSHYYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTAL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AEMPLVQKGSRLSVMPVTAEQWAAVLGLR HHCCHHCCCCCEEEEECCHHHHHHHHCCC >Mature Secondary Structure AYWLMKSEPDELSIKGLEKLGKARWDGVRNYQARNFLRAMAVGDEFFFYHSSCPEPGIA EEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCHH GIGKIIEAAYPDPTALEPQSHYYDPKATPDKNPWSAIDVAHVETFSRVLKLDYLKQQTAL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AEMPLVQKGSRLSVMPVTAEQWAAVLGLR HHCCHHCCCCCEEEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA