| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461653
Identifier: 77461653
GI number: 77461653
Start: 6100068
End: 6100553
Strand: Reverse
Name: 77461653
Synonym: Pfl01_5432
Alternate gene names: NA
Gene position: 6100553-6100068 (Counterclockwise)
Preceding gene: 77461654
Following gene: 77461652
Centisome position: 94.75
GC content: 60.29
Gene sequence:
>486_bases ATGCGTGAGTGGCTGATCAGACGGTTTGGCAAGGCGCGGCTGATGCGCTGGATCATGACGCTCTACCCGCCGTACTTCGG CGCCGGTGTCCGGGTGCAGCACATCAGCGATGACTTTCGTGACATCCAGGTCTCGATGGGCCTGGGCTGGTACAACCGCA ATTACGTCGGCACCCAGTTCGGCGGCAGTCTGTATTCGATGGTCGATCCGTTCTTCATGTTGATGCTCATGGAAAACCTC GGCTCGAAGTACATCGTCTGGGACAAGGCCGCCGACATTGATTTCATCTCGCCGGGCAAAGGCCCGGTGTTCGCCCGGTT CAACATCGACGACACCCTGCTCGACGAGATCCGCCGGCAGACCGCCAGTGGCGAGAAATACCTGCCGCAGTTGCAGGTCG ACATTCATGACGGCGCCGGCAACCTGGTGGCGCGGGTCGGTAAAACCCTTTACGTGCGGCTCAAGCCGCCAGCGAGACAG GCTTAA
Upstream 100 bases:
>100_bases GTGTCGCTGGGGCGCAACATCGGCCTGCTCGGCCTCGATCTGCTGCCGCCGGCCAAACGCTGGTTCGCCCGTCAGGCCAT GGGGCTGGGGACGCGGCCGG
Downstream 100 bases:
>100_bases AGCATGGAAATGCGCGCGGATGTGCTGATTGTCGGAGCCGGAATGGTCGGCAGTGCCCTGGCGCTGGCGTTGCAGGGCAG CGGGCTGGAAGTCCTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MREWLIRRFGKARLMRWIMTLYPPYFGAGVRVQHISDDFRDIQVSMGLGWYNRNYVGTQFGGSLYSMVDPFFMLMLMENL GSKYIVWDKAADIDFISPGKGPVFARFNIDDTLLDEIRRQTASGEKYLPQLQVDIHDGAGNLVARVGKTLYVRLKPPARQ A
Sequences:
>Translated_161_residues MREWLIRRFGKARLMRWIMTLYPPYFGAGVRVQHISDDFRDIQVSMGLGWYNRNYVGTQFGGSLYSMVDPFFMLMLMENL GSKYIVWDKAADIDFISPGKGPVFARFNIDDTLLDEIRRQTASGEKYLPQLQVDIHDGAGNLVARVGKTLYVRLKPPARQ A >Mature_161_residues MREWLIRRFGKARLMRWIMTLYPPYFGAGVRVQHISDDFRDIQVSMGLGWYNRNYVGTQFGGSLYSMVDPFFMLMLMENL GSKYIVWDKAADIDFISPGKGPVFARFNIDDTLLDEIRRQTASGEKYLPQLQVDIHDGAGNLVARVGKTLYVRLKPPARQ A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18544; Mature: 18544
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREWLIRRFGKARLMRWIMTLYPPYFGAGVRVQHISDDFRDIQVSMGLGWYNRNYVGTQF CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHEEEEEECCCCCCCCCCCCCC GGSLYSMVDPFFMLMLMENLGSKYIVWDKAADIDFISPGKGPVFARFNIDDTLLDEIRRQ CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCEEEEECCCHHHHHHHHHH TASGEKYLPQLQVDIHDGAGNLVARVGKTLYVRLKPPARQA HCCCCCCCCEEEEEEECCCCHHHHHCCCEEEEEECCCCCCC >Mature Secondary Structure MREWLIRRFGKARLMRWIMTLYPPYFGAGVRVQHISDDFRDIQVSMGLGWYNRNYVGTQF CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHEEEEEECCCCCCCCCCCCCC GGSLYSMVDPFFMLMLMENLGSKYIVWDKAADIDFISPGKGPVFARFNIDDTLLDEIRRQ CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCEEEEECCCHHHHHHHHHH TASGEKYLPQLQVDIHDGAGNLVARVGKTLYVRLKPPARQA HCCCCCCCCEEEEEEECCCCHHHHHCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA