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The map label for this gene is zntR [H]

Identifier: 77461593

GI number: 77461593

Start: 6035176

End: 6035625

Strand: Direct

Name: zntR [H]

Synonym: Pfl01_5372

Alternate gene names: 77461593

Gene position: 6035176-6035625 (Clockwise)

Preceding gene: 77461584

Following gene: 77461597

Centisome position: 93.74

GC content: 61.56

Gene sequence:

>450_bases
ATGAAGATCGGAGAACTGGCGAAACAGACCGATTGCGCCGTGGAAACCATCCGCTACTACGAGCGTGAAAACCTGCTGCC
GGAACCGGCCCGCAGCGATGGCAACTACCGCGTCTACACCCAGGCCCACGCCGAGCGCCTGACTTTCATCCGCAACTGCC
GCACCCTCGACATGACACTCGAAGAAATCCGCAGCCTGCTCGCCTTGCGCGACAGCCCGCAGGATCAATGCGAAAGCGTG
AATGCGCTGATCGACGAGCACATCCAGCACGTCAAGGCGCGAATCGATGGGTTACTGGCGTTGCAGACGCAACTGCTCGA
GCTGCGCCAGCGCTGTGGCGAAGGGCCGGAGGCGGATCAGTGCGGGATCCTGCAGCGGCTGGAAGTCAGTGGCGGAGTTG
TGGCGACGGAGGTTGAGCATTCGCATGTGGGCAGAAGCCACGGTCATTAA

Upstream 100 bases:

>100_bases
GCAGGGAATCGCTCATTGGTCGCGTCCATGAAGGTGCCTGTTGCCAAGTAAAGACCCTGTAGCCACTATAGGGTCAAGCA
CCCTTTTGGAGATTGCCGTC

Downstream 100 bases:

>100_bases
GCGCCAGAAACAACGGAGGGAGCCATTTGGCTCCCTCCGTTGTTTGTCACTCGTGCTTCAGACCGCCATCGGCGCGGTCA
TCGGCGCATGGTGCTCGTAG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKIGELAKQTDCAVETIRYYERENLLPEPARSDGNYRVYTQAHAERLTFIRNCRTLDMTLEEIRSLLALRDSPQDQCESV
NALIDEHIQHVKARIDGLLALQTQLLELRQRCGEGPEADQCGILQRLEVSGGVVATEVEHSHVGRSHGH

Sequences:

>Translated_149_residues
MKIGELAKQTDCAVETIRYYERENLLPEPARSDGNYRVYTQAHAERLTFIRNCRTLDMTLEEIRSLLALRDSPQDQCESV
NALIDEHIQHVKARIDGLLALQTQLLELRQRCGEGPEADQCGILQRLEVSGGVVATEVEHSHVGRSHGH
>Mature_149_residues
MKIGELAKQTDCAVETIRYYERENLLPEPARSDGNYRVYTQAHAERLTFIRNCRTLDMTLEEIRSLLALRDSPQDQCESV
NALIDEHIQHVKARIDGLLALQTQLLELRQRCGEGPEADQCGILQRLEVSGGVVATEVEHSHVGRSHGH

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=129, Percent_Identity=38.7596899224806, Blast_Score=95, Evalue=2e-21,
Organism=Escherichia coli, GI1786695, Length=127, Percent_Identity=33.8582677165354, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16845; Mature: 16845

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGELAKQTDCAVETIRYYERENLLPEPARSDGNYRVYTQAHAERLTFIRNCRTLDMTL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCHHHHHHH
EEIRSLLALRDSPQDQCESVNALIDEHIQHVKARIDGLLALQTQLLELRQRCGEGPEADQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
CGILQRLEVSGGVVATEVEHSHVGRSHGH
HHHHHHHHCCCCEEEEECHHHHCCCCCCC
>Mature Secondary Structure
MKIGELAKQTDCAVETIRYYERENLLPEPARSDGNYRVYTQAHAERLTFIRNCRTLDMTL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCHHHHHHH
EEIRSLLALRDSPQDQCESVNALIDEHIQHVKARIDGLLALQTQLLELRQRCGEGPEADQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
CGILQRLEVSGGVVATEVEHSHVGRSHGH
HHHHHHHHCCCCEEEEECHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]