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The map label for this gene is yqfA [C]

Identifier: 77461513

GI number: 77461513

Start: 5955237

End: 5955854

Strand: Reverse

Name: yqfA [C]

Synonym: Pfl01_5292

Alternate gene names: 77461513

Gene position: 5955854-5955237 (Counterclockwise)

Preceding gene: 77461515

Following gene: 77461511

Centisome position: 92.51

GC content: 60.52

Gene sequence:

>618_bases
ATGTATCACGGAGAAAAACTGAACGCCTGGACGCATCTGGTCGGGGCGGTGGCGGCGTTTGTCGGAGGCGTGTGGATGCT
GGTGATTGCCAGCCTCGACGGCAGCCCGTGGAAGATTGTCAGCGTGGCGATTTATGCTTTTACGTTGCTGGTGCTCTACA
GCGCATCCACCGTGTACCACAGCGTGCGCGGGCGCAAGAAAGCGATCATGAAGAAGGTCGATCACTTTTCGATCTACCTG
CTGATCGCCGGCAGTTACACACCATTCTGCCTGGTGACGCTGCGCGGGCCGTGGGGCTGGACGCTGTTCGGGATCGTCTG
GGGGCTGGCGCTGATCGGCATCCTGCAAGAGATCAAGCCGCGCTCGGAGGCGCGGATCCTGTCGATCGTGATCTACGCGG
TGATGGGCTGGATCGTGCTGGTGGCGGTCAAGCCGCTGATCGCCGCGCTGGGGACGGCGGGGTTTGCCTGGCTGGCGTCG
GGTGGCGTGCTGTACACCGTGGGGATCATCTTTTTTGCCCTCGACCATCGGTTGCGGCATGCCCACGGGATCTGGCATCT
ATTCGTGATCGCCGGAAGCTTGCTGCACTTTGTGGCGATTCTGTTTTATGTCCTTTAA

Upstream 100 bases:

>100_bases
CAGGACAGGTGCAGGCCCGTGTTGAACGGAAACATTGCGCTTTTACGCTCAAGGCCCGAGCCTTGCGCGCTGCGGTAAAT
GAAATCGAGGTGTGCGACAC

Downstream 100 bases:

>100_bases
GGGCGCATCAGTCGGTCGAGTTGTTCCCGGGCTCGCTGACTGAAGATCTGCAGCAAATCATTCAGGGTGTGCGGCAAAGG
TTCAGTGGCGCGGGTCACGG

Product: HylII

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MYHGEKLNAWTHLVGAVAAFVGGVWMLVIASLDGSPWKIVSVAIYAFTLLVLYSASTVYHSVRGRKKAIMKKVDHFSIYL
LIAGSYTPFCLVTLRGPWGWTLFGIVWGLALIGILQEIKPRSEARILSIVIYAVMGWIVLVAVKPLIAALGTAGFAWLAS
GGVLYTVGIIFFALDHRLRHAHGIWHLFVIAGSLLHFVAILFYVL

Sequences:

>Translated_205_residues
MYHGEKLNAWTHLVGAVAAFVGGVWMLVIASLDGSPWKIVSVAIYAFTLLVLYSASTVYHSVRGRKKAIMKKVDHFSIYL
LIAGSYTPFCLVTLRGPWGWTLFGIVWGLALIGILQEIKPRSEARILSIVIYAVMGWIVLVAVKPLIAALGTAGFAWLAS
GGVLYTVGIIFFALDHRLRHAHGIWHLFVIAGSLLHFVAILFYVL
>Mature_205_residues
MYHGEKLNAWTHLVGAVAAFVGGVWMLVIASLDGSPWKIVSVAIYAFTLLVLYSASTVYHSVRGRKKAIMKKVDHFSIYL
LIAGSYTPFCLVTLRGPWGWTLFGIVWGLALIGILQEIKPRSEARILSIVIYAVMGWIVLVAVKPLIAALGTAGFAWLAS
GGVLYTVGIIFFALDHRLRHAHGIWHLFVIAGSLLHFVAILFYVL

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=203, Percent_Identity=29.5566502463054, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI154759277, Length=227, Percent_Identity=27.3127753303965, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI52630445, Length=203, Percent_Identity=29.064039408867, Blast_Score=81, Evalue=7e-16,
Organism=Escherichia coli, GI1789266, Length=202, Percent_Identity=42.0792079207921, Blast_Score=142, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71996356, Length=174, Percent_Identity=32.7586206896552, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 22564; Mature: 22564

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHGEKLNAWTHLVGAVAAFVGGVWMLVIASLDGSPWKIVSVAIYAFTLLVLYSASTVYH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVRGRKKAIMKKVDHFSIYLLIAGSYTPFCLVTLRGPWGWTLFGIVWGLALIGILQEIKP
HHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
RSEARILSIVIYAVMGWIVLVAVKPLIAALGTAGFAWLASGGVLYTVGIIFFALDHRLRH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AHGIWHLFVIAGSLLHFVAILFYVL
HHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MYHGEKLNAWTHLVGAVAAFVGGVWMLVIASLDGSPWKIVSVAIYAFTLLVLYSASTVYH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVRGRKKAIMKKVDHFSIYLLIAGSYTPFCLVTLRGPWGWTLFGIVWGLALIGILQEIKP
HHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
RSEARILSIVIYAVMGWIVLVAVKPLIAALGTAGFAWLASGGVLYTVGIIFFALDHRLRH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AHGIWHLFVIAGSLLHFVAILFYVL
HHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]