| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ahcY [H]
Identifier: 77461501
GI number: 77461501
Start: 5940763
End: 5942172
Strand: Direct
Name: ahcY [H]
Synonym: Pfl01_5280
Alternate gene names: 77461501
Gene position: 5940763-5942172 (Clockwise)
Preceding gene: 77461498
Following gene: 77461502
Centisome position: 92.27
GC content: 58.72
Gene sequence:
>1410_bases ATGAGCGCTGTTATCACGCCTGCCGATTTTAACGATTACAAAGTTGCCGACATATCCCTGGCTGCCTGGGGTCGTCGCGA AACCATCATCGCCGAGTCGGAAATGCCGGCCCTGATGGGTCTGCGCCGCAAGTACGCTTCCGAGCAGCCTTTGAAAGGCG CAAAAATCCTCGGCTGCATCCACATGACCATCCAGACCGCCGTGCTGATCGAAACCCTGGTTGCCCTGGGTGCCGAAGTA CGCTGGTCGTCCTGCAACATTTTCTCGACTCAGGATCAGGCCGCTGCTTCCATCGCTGCTGCCGGCATCCCGGTTTTCGC CTGGAAAGGCGAGACTGAAGAAGAGTACGAGTGGTGCCTGGAGCAGACCATCCTGAAGGATGGCCAGCCATGGGACGCCA ACATGATCCTCGACGACGGCGGCGACCTGACCGAGCTGCTGCACAAGAAATACCCACAGGTTCTGGACCGTGTTCACGGC GTGACCGAAGAAACCACCACCGGCGTGCACCGTCTGCTGGACATGCTGGCCAAGGGCGAGCTGAAAATCCCGGCCATCAA CGTCAACGACTCGGTGACCAAGTCCAAGAACGACAACAAGTACGGCTGCCGTCACAGCCTGAACGATGCCATCAAGCGTG GCACCGACCACCTGCTGTCCGGCAAGCAAGCGCTGGTCATCGGTTACGGTGACGTGGGCAAGGGTTCGGCCCAGTCCCTG CGTCAGGAAGGCATGATCGTCAAAGTCTCCGAAGTTGACCCGATCTGCGCCATGCAAGCCTGCATGGACGGTTTCGAACT GGTTTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCGAGCATCGACAAAGCGCTGCTGGGCAAGATCGACCTGA TCGTGACCACCACCGGTAACGTCAACGTTTGCGACGCAAACATGCTCAAAGCCCTGAAGAAGCGCGCCGTTGTCTGCAAC ATCGGTCACTTCGACAACGAAATCGACACCGCTTTCATGCGCAAGAACTGGGCATGGGAAGAAGTGAAGCCACAGGTACA CAAGATCCACCGTACCGGCGCTGGCTCGTTCGATCCACAGAACGACGACTACCTGATCCTGCTGGCCGAAGGCCGTCTGG TGAACCTGGGCAACGCTACCGGTCACCCAAGCCGCATCATGGACGGTTCGTTCGCCAACCAGGTTCTGGCGCAGATCTTC CTGTTCGGCCAGAAGTACGCCGACCTGTCGCCAGCCCAGAAAGCCGAGCGCCTGACCGTTGAAGTACTGCCGAAGAAACT CGACGAAGAAGTGGCCCTGGAAATGGTTCGCGGCTTCGGCGGCGTGGTCACTCAACTGACCAAGCAACAGGCTGACTACA TCGGCGTGACCGTCGAAGGTCCGTTCAAGCCACACGCTTACCGCTACTAA
Upstream 100 bases:
>100_bases AGGTTCAACCTGTCAGGCTCGGATGGGGCGTTGACCGGCTCAGGCCGGACACTAAACGCACAACGGCGCCCATTCGCATA CATTACGAATGGAGGCTCTC
Downstream 100 bases:
>100_bases GAGCAGCTGCGAGCTTCAAGCTTCAAGCGGCAAGCAAGGCCACAAGCCGGGCTTGCCGCGCGAAGCCCGAAAGCTCTGCC CCTATTTGTCAAAACAGTGT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSAVITPADFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYASEQPLKGAKILGCIHMTIQTAVLIETLVALGAEV RWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHKKYPQVLDRVHG VTEETTTGVHRLLDMLAKGELKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSL RQEGMIVKVSEVDPICAMQACMDGFELVSPFIDGINDGTEASIDKALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCN IGHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGAGSFDPQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIF LFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQADYIGVTVEGPFKPHAYRY
Sequences:
>Translated_469_residues MSAVITPADFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYASEQPLKGAKILGCIHMTIQTAVLIETLVALGAEV RWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHKKYPQVLDRVHG VTEETTTGVHRLLDMLAKGELKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSL RQEGMIVKVSEVDPICAMQACMDGFELVSPFIDGINDGTEASIDKALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCN IGHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGAGSFDPQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIF LFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQADYIGVTVEGPFKPHAYRY >Mature_468_residues SAVITPADFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYASEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVR WSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHKKYPQVLDRVHGV TEETTTGVHRLLDMLAKGELKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSLR QEGMIVKVSEVDPICAMQACMDGFELVSPFIDGINDGTEASIDKALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCNI GHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGAGSFDPQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFL FGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQADYIGVTVEGPFKPHAYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=460, Percent_Identity=55.6521739130435, Blast_Score=468, Evalue=1e-132, Organism=Homo sapiens, GI239937451, Length=438, Percent_Identity=54.7945205479452, Blast_Score=437, Evalue=1e-122, Organism=Homo sapiens, GI24308043, Length=461, Percent_Identity=46.6377440347072, Blast_Score=413, Evalue=1e-115, Organism=Homo sapiens, GI298286489, Length=461, Percent_Identity=46.6377440347072, Blast_Score=413, Evalue=1e-115, Organism=Homo sapiens, GI195539337, Length=461, Percent_Identity=46.6377440347072, Blast_Score=413, Evalue=1e-115, Organism=Homo sapiens, GI195539349, Length=461, Percent_Identity=46.6377440347072, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI21361647, Length=461, Percent_Identity=46.4208242950108, Blast_Score=395, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17506425, Length=459, Percent_Identity=57.7342047930283, Blast_Score=499, Evalue=1e-141, Organism=Saccharomyces cerevisiae, GI6320882, Length=467, Percent_Identity=53.7473233404711, Blast_Score=456, Evalue=1e-129, Organism=Drosophila melanogaster, GI24642172, Length=461, Percent_Identity=56.1822125813449, Blast_Score=471, Evalue=1e-133, Organism=Drosophila melanogaster, GI24656245, Length=462, Percent_Identity=46.7532467532467, Blast_Score=409, Evalue=1e-114, Organism=Drosophila melanogaster, GI45553387, Length=459, Percent_Identity=47.9302832244009, Blast_Score=395, Evalue=1e-110, Organism=Drosophila melanogaster, GI45553385, Length=458, Percent_Identity=47.8165938864629, Blast_Score=392, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51419; Mature: 51288
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVITPADFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYASEQPLKGAKILGCI CCCEECCCCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHH HMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCL HHHHHHHHHHHHHHHCCCCEEECCCCEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHH EQTILKDGQPWDANMILDDGGDLTELLHKKYPQVLDRVHGVTEETTTGVHRLLDMLAKGE HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC LKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSL EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCCEEEEECCCCCCCHHHHH RQEGMIVKVSEVDPICAMQACMDGFELVSPFIDGINDGTEASIDKALLGKIDLIVTTTGN HHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCC VNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGAGSFDPQ CEECCHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCCCHHHHCHHHHHHHHCCCCCCCCC NDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTV CCCEEEEEECCCEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EVLPKKLDEEVALEMVRGFGGVVTQLTKQQADYIGVTVEGPFKPHAYRY HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure SAVITPADFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYASEQPLKGAKILGCI CCEECCCCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHH HMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCL HHHHHHHHHHHHHHHCCCCEEECCCCEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHH EQTILKDGQPWDANMILDDGGDLTELLHKKYPQVLDRVHGVTEETTTGVHRLLDMLAKGE HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC LKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSL EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCCEEEEECCCCCCCHHHHH RQEGMIVKVSEVDPICAMQACMDGFELVSPFIDGINDGTEASIDKALLGKIDLIVTTTGN HHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCC VNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGAGSFDPQ CEECCHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCCCHHHHCHHHHHHHHCCCCCCCCC NDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTV CCCEEEEEECCCEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EVLPKKLDEEVALEMVRGFGGVVTQLTKQQADYIGVTVEGPFKPHAYRY HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA