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The map label for this gene is yciA [C]

Identifier: 77461500

GI number: 77461500

Start: 5940037

End: 5940444

Strand: Reverse

Name: yciA [C]

Synonym: Pfl01_5279

Alternate gene names: 77461500

Gene position: 5940444-5940037 (Counterclockwise)

Preceding gene: 77461505

Following gene: 77461499

Centisome position: 92.27

GC content: 58.82

Gene sequence:

>408_bases
ATGAATTTCCACACCCGCAAGTGGGTAAAACCCGAAGACCTCAACCCCAATGGCACCCTGTTCGGCGGCAGCCTGCTGCG
CTGGATCGACGAAGAAGCGGCGATCTACGCCATCGTGCAACTTGGCAACCAGCGCGTGGTGACCAAGTACATTTCCGAAA
TCAACTTCGTCAGCGCCTCGCGCCAGGGCGACATCATCGAACTGGGCATCACCGCCACCGAGTTCGGCCGGACCTCGATC
ACCCTGACCTGTGAAGTGCGCAACAAGATCACCCGCAAGAGCATCCTGACCGTCGAGAAGATGGTCTTCGTCAACCTCGG
CGAAGACGGCTTGCCGGCGCCGCACGGGCGAACCGAGATCAGGTATGTCAAAGACCAGTTCAAGGATGACGTGCCCGTTA
CCGAGTAA

Upstream 100 bases:

>100_bases
TGAAGATCGCCAATCGCGACCATAGTAGAAGCCTCATGGAGCATGACCGCTCAGTCTGCCAAGATGGCCCCATCATTCGG
CAAGACGCTCAGGAGTGAAG

Downstream 100 bases:

>100_bases
TCGCGTCACACCGGCGAACGGAAGCCGAGCGGCGCGTGTCGTAGCCTTATGACCCCGCCACCGGTTTCCCGCCATGACCA
CACCAACAGACGGCAAGACC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Acyl-CoA Thioester Hydrolase; Long-Chain Acyl-CoA Thioester Hydrolase Family Protein; Acyl-CoA Hydrolase; Thioesterase Family Protein; Long-Chain Acyl-CoA Thioester Hydrolase; Acyl-CoA Hydrolase Family Protein; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase Domain-Containing Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNFHTRKWVKPEDLNPNGTLFGGSLLRWIDEEAAIYAIVQLGNQRVVTKYISEINFVSASRQGDIIELGITATEFGRTSI
TLTCEVRNKITRKSILTVEKMVFVNLGEDGLPAPHGRTEIRYVKDQFKDDVPVTE

Sequences:

>Translated_135_residues
MNFHTRKWVKPEDLNPNGTLFGGSLLRWIDEEAAIYAIVQLGNQRVVTKYISEINFVSASRQGDIIELGITATEFGRTSI
TLTCEVRNKITRKSILTVEKMVFVNLGEDGLPAPHGRTEIRYVKDQFKDDVPVTE
>Mature_135_residues
MNFHTRKWVKPEDLNPNGTLFGGSLLRWIDEEAAIYAIVQLGNQRVVTKYISEINFVSASRQGDIIELGITATEFGRTSI
TLTCEVRNKITRKSILTVEKMVFVNLGEDGLPAPHGRTEIRYVKDQFKDDVPVTE

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.2.- [C]

Molecular weight: Translated: 15269; Mature: 15269

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFHTRKWVKPEDLNPNGTLFGGSLLRWIDEEAAIYAIVQLGNQRVVTKYISEINFVSAS
CCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHHCCCC
RQGDIIELGITATEFGRTSITLTCEVRNKITRKSILTVEKMVFVNLGEDGLPAPHGRTEI
CCCCEEEEECEECCCCCEEEEEEEEHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCHH
RYVKDQFKDDVPVTE
EEHHHHHCCCCCCCC
>Mature Secondary Structure
MNFHTRKWVKPEDLNPNGTLFGGSLLRWIDEEAAIYAIVQLGNQRVVTKYISEINFVSAS
CCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHHCCCC
RQGDIIELGITATEFGRTSITLTCEVRNKITRKSILTVEKMVFVNLGEDGLPAPHGRTEI
CCCCEEEEECEECCCCCEEEEEEEEHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCHH
RYVKDQFKDDVPVTE
EEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA