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The map label for this gene is yfdC [H]

Identifier: 77461499

GI number: 77461499

Start: 5939076

End: 5939963

Strand: Reverse

Name: yfdC [H]

Synonym: Pfl01_5278

Alternate gene names: 77461499

Gene position: 5939963-5939076 (Counterclockwise)

Preceding gene: 77461500

Following gene: 77461496

Centisome position: 92.26

GC content: 60.36

Gene sequence:

>888_bases
ATGACCACACCAACAGACGGCAAGACCCCCGATCTCTCGGCCAAGGAACAGCACGAAGTCGAGAAAAACCAGCCGCCCCG
CGCGGCGGTTCTGCATGAAATCATCCGCAAACAGGGCGACCAGGAACTGGAGCGCAGCATCGCCGCGCTGTGGTGGTCGG
CGCTCGCGGCCGGGCTGACCATGGGCCTGTCGCTGATGGGCATGGGCCTGCTCAACTCGCGTCTGCCCGAGGGCGACGAA
TTCAAGGTGATCGCCAGTTTCGGCTACTGCGCAGGCTTTCTCGCGGTGATCCTCGCCCGCCAGCAACTGTTTACCGAAAA
CACCCTGACTGCTGTGCTGCCGGTGATGACCAAACCGACCCTGGCCAATTTCGGCCGGTTGATCCGGCTGTGGACGGTGG
TGCTGTTCGGCAACCTGTGCGGGACGATTCTGGTGGCCTACGTGATGCTCGAACTGCCGATCTTCGACAGCAAGACTGAC
GTAGCCTTCCTCGAAATCGGCCGCAAGGTCATGGAAAACCACGCGAGTCAGATGTTCGCCAAGGGCATCGTCTCGGGCTG
GATGATTGCCACCATGGTCTGGATGATTCCGTCCATGGAGAGCGCGAAGATGTGGATCATCATCCTCATCACCTATCTGA
TGGCACTGGGCGATTTCACGCACATCGTGGTGGGGTCGGCGGAGGTGTCGTATCTGGTGTTTGCCGGCGAGTTGCCGTGG
AGTGACTTCTGGGCGGTGTTCGCCGGGCCGACCCTGGCGGGGAACATCATCGGCGGCAGTTTCATCTTCGCCCTGATCAG
TCATGCGCAGATCCGCAGTGAAAGCGGAAAGCCGAAAGAGTCTGCGGATCAGGCCGAAAAGCCCGATCCGCAGCAGATCA
AGAAATGA

Upstream 100 bases:

>100_bases
AAGGATGACGTGCCCGTTACCGAGTAATCGCGTCACACCGGCGAACGGAAGCCGAGCGGCGCGTGTCGTAGCCTTATGAC
CCCGCCACCGGTTTCCCGCC

Downstream 100 bases:

>100_bases
TCAATGGTGCGCGGGCTCGGCAGCGCTCGCCGGCTCGTCGCGCGTTGCGTGCTTGACCAGTTTGCCGATGGTCAGGCCCT
GCAACAGGATCGATGACAGC

Product: formate/nitrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTTPTDGKTPDLSAKEQHEVEKNQPPRAAVLHEIIRKQGDQELERSIAALWWSALAAGLTMGLSLMGMGLLNSRLPEGDE
FKVIASFGYCAGFLAVILARQQLFTENTLTAVLPVMTKPTLANFGRLIRLWTVVLFGNLCGTILVAYVMLELPIFDSKTD
VAFLEIGRKVMENHASQMFAKGIVSGWMIATMVWMIPSMESAKMWIIILITYLMALGDFTHIVVGSAEVSYLVFAGELPW
SDFWAVFAGPTLAGNIIGGSFIFALISHAQIRSESGKPKESADQAEKPDPQQIKK

Sequences:

>Translated_295_residues
MTTPTDGKTPDLSAKEQHEVEKNQPPRAAVLHEIIRKQGDQELERSIAALWWSALAAGLTMGLSLMGMGLLNSRLPEGDE
FKVIASFGYCAGFLAVILARQQLFTENTLTAVLPVMTKPTLANFGRLIRLWTVVLFGNLCGTILVAYVMLELPIFDSKTD
VAFLEIGRKVMENHASQMFAKGIVSGWMIATMVWMIPSMESAKMWIIILITYLMALGDFTHIVVGSAEVSYLVFAGELPW
SDFWAVFAGPTLAGNIIGGSFIFALISHAQIRSESGKPKESADQAEKPDPQQIKK
>Mature_294_residues
TTPTDGKTPDLSAKEQHEVEKNQPPRAAVLHEIIRKQGDQELERSIAALWWSALAAGLTMGLSLMGMGLLNSRLPEGDEF
KVIASFGYCAGFLAVILARQQLFTENTLTAVLPVMTKPTLANFGRLIRLWTVVLFGNLCGTILVAYVMLELPIFDSKTDV
AFLEIGRKVMENHASQMFAKGIVSGWMIATMVWMIPSMESAKMWIIILITYLMALGDFTHIVVGSAEVSYLVFAGELPWS
DFWAVFAGPTLAGNIIGGSFIFALISHAQIRSESGKPKESADQAEKPDPQQIKK

Specific function: Unknown

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788689, Length=275, Percent_Identity=54.5454545454545, Blast_Score=295, Evalue=3e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 32393; Mature: 32262

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPTDGKTPDLSAKEQHEVEKNQPPRAAVLHEIIRKQGDQELERSIAALWWSALAAGLT
CCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
MGLSLMGMGLLNSRLPEGDEFKVIASFGYCAGFLAVILARQQLFTENTLTAVLPVMTKPT
HHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LANFGRLIRLWTVVLFGNLCGTILVAYVMLELPIFDSKTDVAFLEIGRKVMENHASQMFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KGIVSGWMIATMVWMIPSMESAKMWIIILITYLMALGDFTHIVVGSAEVSYLVFAGELPW
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCEEEEEEECCCCH
SDFWAVFAGPTLAGNIIGGSFIFALISHAQIRSESGKPKESADQAEKPDPQQIKK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCC
>Mature Secondary Structure 
TTPTDGKTPDLSAKEQHEVEKNQPPRAAVLHEIIRKQGDQELERSIAALWWSALAAGLT
CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
MGLSLMGMGLLNSRLPEGDEFKVIASFGYCAGFLAVILARQQLFTENTLTAVLPVMTKPT
HHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LANFGRLIRLWTVVLFGNLCGTILVAYVMLELPIFDSKTDVAFLEIGRKVMENHASQMFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KGIVSGWMIATMVWMIPSMESAKMWIIILITYLMALGDFTHIVVGSAEVSYLVFAGELPW
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCEEEEEEECCCCH
SDFWAVFAGPTLAGNIIGGSFIFALISHAQIRSESGKPKESADQAEKPDPQQIKK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]