Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77461496

Identifier: 77461496

GI number: 77461496

Start: 5935483

End: 5936316

Strand: Reverse

Name: 77461496

Synonym: Pfl01_5275

Alternate gene names: NA

Gene position: 5936316-5935483 (Counterclockwise)

Preceding gene: 77461499

Following gene: 77461495

Centisome position: 92.2

GC content: 62.35

Gene sequence:

>834_bases
GTGCTGGCGACAGCTCTGGTGTTGGTGGCGGCGCTGTTGCACGCAGCGTGGAACACGTTGATCAAGTTCAGCGCCGAACG
GCTGCTGGTGGTGGCCTGCATGGACAGCGTGGCGCTGTTGTTCGTGGTGCTGGCGATGCCTTTCATCAGCCTGCCGCCGG
CGGAAATCTGGCCGTGGATTCTGGCGTCGGCGGCGTTCGAACTGCTGTATCGCTACCTGTTGATCCAGGCCTATCGGGTC
GGCGATCTGGGGTTGGTCTATCCGTTGATGCGCGGATTGTCGCCGCTGGTGGTACTGGCGCTGACCCTGATCTTCGCCGG
CGAAGTGCTGACCACCCAGCAAATCTTCGGAATCCTGCTGATCCCGCTGGGCATGGCTTGCCTGCTCTGGCAGGGCGGCG
GCGGGAAACATTTGCCGTGGGCGATGCTGCCGGTGGTGGCGCTGATCGGCTTGTGCATCGGTTGCTACACCTACATCGAC
GGTCAGGCATTGCGGCGCTGGTCGCATCCGCTGGATTACCTGGTCTGGGTCACGCTGCTCAGTGCCTGGCCATTCCCGTT
GCTGGCGGGGGTAGCGAAAAGGCCGGCGTTCAAACTGTTCTGGCGCGAGCAATGGAAGCTGGGGCTGGCGGTCGGATTCT
GCGTGTTGTTCAGCTACGCTCTGGTGCTGTGGGCGATGCAGTTGGGCTCGATTGCCGAAGCGGCGGCGTTGCGTGAAATC
AGCGTGATCCTGGTGGTGCTGTTCGGCATGCGTTACCTGAAAGAACCTTTCGGCCGGCCGCGGCTCTTAGCCTGTGGGCT
GGTGCTGATCGGCATGCTGGTCATGAAGTTCTGA

Upstream 100 bases:

>100_bases
GCGGCGTGGTCGCTTGCAGTATAAACAGCTGCTGACACATCGCGAATCAATAATCTGACTAATTGGCTCAGGTTCAACAA
CAAGAACAAAGGAGTGGCAC

Downstream 100 bases:

>100_bases
GCGCCCGGCAACTCTAAAACTCGAAAGAAGGACGGTGTTATGACGGTGGCTTTGTGGTGTGTGTTGATCGCGATCTTTCT
GCCCTATCTGTGCACCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Integral Membrane; Inner Membrane Protein; Transporter DME Family DMT Superfamily; Small Multidrug Resistance Protein; Transporter Of DMT Superfamily; Transporter Dme Family; DMT Family Permease; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; DMT Superfamily Permease; EmrE Membrane Transporter Of Cations And Cationic Drugs; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Permease Protein

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLATALVLVAALLHAAWNTLIKFSAERLLVVACMDSVALLFVVLAMPFISLPPAEIWPWILASAAFELLYRYLLIQAYRV
GDLGLVYPLMRGLSPLVVLALTLIFAGEVLTTQQIFGILLIPLGMACLLWQGGGGKHLPWAMLPVVALIGLCIGCYTYID
GQALRRWSHPLDYLVWVTLLSAWPFPLLAGVAKRPAFKLFWREQWKLGLAVGFCVLFSYALVLWAMQLGSIAEAAALREI
SVILVVLFGMRYLKEPFGRPRLLACGLVLIGMLVMKF

Sequences:

>Translated_277_residues
MLATALVLVAALLHAAWNTLIKFSAERLLVVACMDSVALLFVVLAMPFISLPPAEIWPWILASAAFELLYRYLLIQAYRV
GDLGLVYPLMRGLSPLVVLALTLIFAGEVLTTQQIFGILLIPLGMACLLWQGGGGKHLPWAMLPVVALIGLCIGCYTYID
GQALRRWSHPLDYLVWVTLLSAWPFPLLAGVAKRPAFKLFWREQWKLGLAVGFCVLFSYALVLWAMQLGSIAEAAALREI
SVILVVLFGMRYLKEPFGRPRLLACGLVLIGMLVMKF
>Mature_277_residues
MLATALVLVAALLHAAWNTLIKFSAERLLVVACMDSVALLFVVLAMPFISLPPAEIWPWILASAAFELLYRYLLIQAYRV
GDLGLVYPLMRGLSPLVVLALTLIFAGEVLTTQQIFGILLIPLGMACLLWQGGGGKHLPWAMLPVVALIGLCIGCYTYID
GQALRRWSHPLDYLVWVTLLSAWPFPLLAGVAKRPAFKLFWREQWKLGLAVGFCVLFSYALVLWAMQLGSIAEAAALREI
SVILVVLFGMRYLKEPFGRPRLLACGLVLIGMLVMKF

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30645; Mature: 30645

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA