| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461495
Identifier: 77461495
GI number: 77461495
Start: 5935060
End: 5935443
Strand: Reverse
Name: 77461495
Synonym: Pfl01_5274
Alternate gene names: NA
Gene position: 5935443-5935060 (Counterclockwise)
Preceding gene: 77461496
Following gene: 77461493
Centisome position: 92.19
GC content: 59.38
Gene sequence:
>384_bases ATGACGGTGGCTTTGTGGTGTGTGTTGATCGCGATCTTTCTGCCCTATCTGTGCACCGTCGTGGCCAAGGCCTCGGGTGG TTTCAGACTGCGGGACAATCATGATCCCCGGGACTTTCTGGACAGCGTGGATGGCGTGGCGCGTCGTGCCCATGCGGCGC AACTGAACAGTTTTGAAGTGACCCCGGCGTTTGCGGCGGCGGTGATCGTCGCGCACCTGGTGGGCACGGCAGAGCTGGTG ACGGTCAATGTGCTGGCGGTGCTGTTCATCACCAGTCGCCTGCTCTACATCATTTGCTATCTGGCGGACTGGGCGGCTTT GCGCTCGCTGGTGTGGTTTGTCGGGATAGTGCTGATTGCCAGCTTCTTCTTCGTTTCGATCTGA
Upstream 100 bases:
>100_bases CCGGCCGCGGCTCTTAGCCTGTGGGCTGGTGCTGATCGGCATGCTGGTCATGAAGTTCTGAGCGCCCGGCAACTCTAAAA CTCGAAAGAAGGACGGTGTT
Downstream 100 bases:
>100_bases ACCTGAAAAGATCGCAGGCTGACGAGGCCTGCGATCTTTTGCGTTGCGCTTACGGCTTGTCGGCCACCTGCGGGACTTGC GGCAACGCCGCGCCTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Membrane Protein
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTVALWCVLIAIFLPYLCTVVAKASGGFRLRDNHDPRDFLDSVDGVARRAHAAQLNSFEVTPAFAAAVIVAHLVGTAELV TVNVLAVLFITSRLLYIICYLADWAALRSLVWFVGIVLIASFFFVSI
Sequences:
>Translated_127_residues MTVALWCVLIAIFLPYLCTVVAKASGGFRLRDNHDPRDFLDSVDGVARRAHAAQLNSFEVTPAFAAAVIVAHLVGTAELV TVNVLAVLFITSRLLYIICYLADWAALRSLVWFVGIVLIASFFFVSI >Mature_126_residues TVALWCVLIAIFLPYLCTVVAKASGGFRLRDNHDPRDFLDSVDGVARRAHAAQLNSFEVTPAFAAAVIVAHLVGTAELVT VNVLAVLFITSRLLYIICYLADWAALRSLVWFVGIVLIASFFFVSI
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13901; Mature: 13769
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVALWCVLIAIFLPYLCTVVAKASGGFRLRDNHDPRDFLDSVDGVARRAHAAQLNSFEV CHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC TPAFAAAVIVAHLVGTAELVTVNVLAVLFITSRLLYIICYLADWAALRSLVWFVGIVLIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFFFVSI HHHHHCC >Mature Secondary Structure TVALWCVLIAIFLPYLCTVVAKASGGFRLRDNHDPRDFLDSVDGVARRAHAAQLNSFEV HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC TPAFAAAVIVAHLVGTAELVTVNVLAVLFITSRLLYIICYLADWAALRSLVWFVGIVLIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFFFVSI HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA