Click here to switch to the map view.

The map label for this gene is 77461493

Identifier: 77461493

GI number: 77461493

Start: 5933260

End: 5933709

Strand: Reverse

Name: 77461493

Synonym: Pfl01_5272

Alternate gene names: NA

Gene position: 5933709-5933260 (Counterclockwise)

Preceding gene: 77461495

Following gene: 77461488

Centisome position: 92.16

GC content: 58.22

Gene sequence:

>450_bases
ATGACTCTTAAACGAATTTCTGTTGTATTGCTGGCCTGTCTGACCTTGTCCGCCTGTGGCGGTGTCGACCCGAATTCCCC
GCTGGGTCAGCGCAAGGCAATCTTCAAGCAGATGCTCAAGACCGGCGAAGACCTGGGCGGCATGCTGCGCGGACGCATTG
CCTTCGACGGGCCGAAATTTGCGGAAGGTGCGGTCAAGCTCGATGCGTTGTCCCATGAGCCGTGGAAACATTTCCCGCAG
GTGCGCGAAGAAGATCACACCAGCGCCAAGGACGATGTATGGCAGAAACAGGCGCGCTTCCAGGAAATGGCCCGCAGCCT
TGAAGCGGCTACCGGTGAACTGGTGATCGCCAGCAAGGTTCAACCCTACAAGGCCAGTAACCTGGGGCCGGCCGTGCAGA
AAGTCGAAGATGCCTGCAGTGCCTGCCATAAAGAGTTTCGCGACCACTGA

Upstream 100 bases:

>100_bases
TGCTCCATGCGCTCAAGCAACCCTTATTGTTAATAGGGCTATTGGTGTTTGGCGGTGACGCGAGGATACTGGCCGCCGAT
TTCCGTGACCTGAAGCCACC

Downstream 100 bases:

>100_bases
TGTTCAAGGGATCACGGCTTTCTTACTTGTCGAGTTCGTCCAGCGCGTCCTGCAATTCCTTGCGCGATTCGGCGAGCTTG
TTCTTGCGCTTGTCGATCTT

Product: cytochrome c, class II

Products: NA

Alternate protein names: Cytochrome C Class II; Cytochrome C Prime; Exported Cytochrome C; Cytochrome

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTLKRISVVLLACLTLSACGGVDPNSPLGQRKAIFKQMLKTGEDLGGMLRGRIAFDGPKFAEGAVKLDALSHEPWKHFPQ
VREEDHTSAKDDVWQKQARFQEMARSLEAATGELVIASKVQPYKASNLGPAVQKVEDACSACHKEFRDH

Sequences:

>Translated_149_residues
MTLKRISVVLLACLTLSACGGVDPNSPLGQRKAIFKQMLKTGEDLGGMLRGRIAFDGPKFAEGAVKLDALSHEPWKHFPQ
VREEDHTSAKDDVWQKQARFQEMARSLEAATGELVIASKVQPYKASNLGPAVQKVEDACSACHKEFRDH
>Mature_148_residues
TLKRISVVLLACLTLSACGGVDPNSPLGQRKAIFKQMLKTGEDLGGMLRGRIAFDGPKFAEGAVKLDALSHEPWKHFPQV
REEDHTSAKDDVWQKQARFQEMARSLEAATGELVIASKVQPYKASNLGPAVQKVEDACSACHKEFRDH

Specific function: Unknown

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16389; Mature: 16258

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKRISVVLLACLTLSACGGVDPNSPLGQRKAIFKQMLKTGEDLGGMLRGRIAFDGPKF
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCH
AEGAVKLDALSHEPWKHFPQVREEDHTSAKDDVWQKQARFQEMARSLEAATGELVIASKV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
QPYKASNLGPAVQKVEDACSACHKEFRDH
CCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLKRISVVLLACLTLSACGGVDPNSPLGQRKAIFKQMLKTGEDLGGMLRGRIAFDGPKF
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCH
AEGAVKLDALSHEPWKHFPQVREEDHTSAKDDVWQKQARFQEMARSLEAATGELVIASKV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
QPYKASNLGPAVQKVEDACSACHKEFRDH
CCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA