Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77461481

Identifier: 77461481

GI number: 77461481

Start: 5920990

End: 5921508

Strand: Direct

Name: 77461481

Synonym: Pfl01_5260

Alternate gene names: NA

Gene position: 5920990-5921508 (Clockwise)

Preceding gene: 77461479

Following gene: 77461482

Centisome position: 91.96

GC content: 41.43

Gene sequence:

>519_bases
ATGGATATTAACATTATGGACATAAATATTATTGTGGTAGCTCACAAAACTTCACAACTTAGCCTTAGTGATGATGCCGG
CCCACATAGTAGAGGAACTATTGAAGATATAGACGTAATGAAAAATGTCGTAACCATAAATGACGGATCAGCACTCCAAA
AAATCAACTTAGAGACCGTAGTAGGCATAGGACTCTCCCCCGAGGAACTACAAAAATCCACACTTCTCGTCAGATCAAAT
AACGCAACCGAAATGCCCAACTCCAGCTTTCAGACCCGGCCTTCGACATTAATACAACCGTATACCTGGACGACTGCAAA
ATTTGAAGGGATATATCCACGCTTCATCCACCATTGGTACTCACCATTACTTGCAAAGTACACCGAATCCGAAATCTCGA
AAATCGGTGCCATAGTCCTACTTCCGGTTGATAAAGATAAAATGAATTTACATGAGGATGATCCACATGCGAATACACCC
AGCATATACTTTATGGTGACTGCCAGCACACAAACGTAA

Upstream 100 bases:

>100_bases
AGCTCATAATTTATATTTCAAAAAAAACGCATTACCTGTCAGAAACTACAGTATGCATTTTGTTTCCATTGAAGAACAAT
AACATCTCAAAACCAATTAA

Downstream 100 bases:

>100_bases
TATATGCTCAAAACCTTGAAGTTAAGAACCCGGATTAAAGGATCAAATAAACGACAGATACGCGAGGAAAAAAACATGAG
CAGGCTACCAATTACTAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MDINIMDINIIVVAHKTSQLSLSDDAGPHSRGTIEDIDVMKNVVTINDGSALQKINLETVVGIGLSPEELQKSTLLVRSN
NATEMPNSSFQTRPSTLIQPYTWTTAKFEGIYPRFIHHWYSPLLAKYTESEISKIGAIVLLPVDKDKMNLHEDDPHANTP
SIYFMVTASTQT

Sequences:

>Translated_172_residues
MDINIMDINIIVVAHKTSQLSLSDDAGPHSRGTIEDIDVMKNVVTINDGSALQKINLETVVGIGLSPEELQKSTLLVRSN
NATEMPNSSFQTRPSTLIQPYTWTTAKFEGIYPRFIHHWYSPLLAKYTESEISKIGAIVLLPVDKDKMNLHEDDPHANTP
SIYFMVTASTQT
>Mature_172_residues
MDINIMDINIIVVAHKTSQLSLSDDAGPHSRGTIEDIDVMKNVVTINDGSALQKINLETVVGIGLSPEELQKSTLLVRSN
NATEMPNSSFQTRPSTLIQPYTWTTAKFEGIYPRFIHHWYSPLLAKYTESEISKIGAIVLLPVDKDKMNLHEDDPHANTP
SIYFMVTASTQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19141; Mature: 19141

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINIMDINIIVVAHKTSQLSLSDDAGPHSRGTIEDIDVMKNVVTINDGSALQKINLETV
CCEEEEEEEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHCEEEEECCCCCEEEECCEEE
VGIGLSPEELQKSTLLVRSNNATEMPNSSFQTRPSTLIQPYTWTTAKFEGIYPRFIHHWY
EECCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEECCCEECCEEECCCCHHHHHHHH
SPLLAKYTESEISKIGAIVLLPVDKDKMNLHEDDPHANTPSIYFMVTASTQT
HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MDINIMDINIIVVAHKTSQLSLSDDAGPHSRGTIEDIDVMKNVVTINDGSALQKINLETV
CCEEEEEEEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHCEEEEECCCCCEEEECCEEE
VGIGLSPEELQKSTLLVRSNNATEMPNSSFQTRPSTLIQPYTWTTAKFEGIYPRFIHHWY
EECCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEECCCEECCEEECCCCHHHHHHHH
SPLLAKYTESEISKIGAIVLLPVDKDKMNLHEDDPHANTPSIYFMVTASTQT
HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA