| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461439
Identifier: 77461439
GI number: 77461439
Start: 5867666
End: 5869534
Strand: Reverse
Name: 77461439
Synonym: Pfl01_5218
Alternate gene names: NA
Gene position: 5869534-5867666 (Counterclockwise)
Preceding gene: 77461440
Following gene: 77461438
Centisome position: 91.16
GC content: 62.28
Gene sequence:
>1869_bases ATGGACAGCTACATCCGCTGGTTTCAACGCTTCATCTGGCTCGGCATTGCGATGAACATGGTGTTCGCGATCCCGGCGCT GTTCGCGCCGGGGTTGCTGACATCGGTGGTCGGCCTGCCGCCGCAACTCTCCGACCCGTGGCTGGAAAACGCCGGAATGC TGCTGGTCGGCATCAGCGTGTTCTACATGCCGTCGGGCTTCGACGCGCCGCGCTACGTGGTGCATTCCTGGTTGTGCGTG CTGACGCGGCTGATTGCGGTGGTGTTCTGGATCTACCTGATCAACACCAGCAGCCAGGGTTCGGTGTTCGTGCCGATGCT GATGGGTGACCTGAGCTTTTTCCTGATCCTCGGCATCCTGCTGTACCTCGGCACCCCCCCTGAAAACCGACCCCTGGCGC TGCTGTGTGACGGCTGGCGCGAATGGCGGGCGGCGTGGGCGCGGCAGTGGCAGAGTCACGCGTTCAAAGTCGGCACCCTG ATCGTGGTGGCGCTGCTGGCGTTCATCGGTTACCAGACCTGGTATCAGATGCTGCGCGTGGTGCCGGAGCAGGATTACTC CTCAGACGAAGATCACTACAAGTACGCCGCGATTGGCCTGGGTATCGAGGCGCGGATTCCCTATTACCTGTTCTCCGTGC TGCCACAAATGTGCCCGGAAAAACTGCCGAAACCCGGTGGCTGGGAAGTCTTCGGTTTCCTGTTCGAGAACGGCAAGGAC CTGCCGATCGGCATGGCCAAGCGGCAGATCGGCTACCCGACCGTCGAGCCGAACTGCGCGCTGTGCCACACCGGTTCCTA CCGGGCGAATGCCAGCGACGTTGCGGTGAATGTGCCGAGCGCGCCGGCCAACACCCTGCAACTGCAGGCCTTCCAGTGGT TCGCCTACGATTGCGCCAGCGATCCGAAATTCACCACCGACGCGGTGATGGCGGCGATCAACAGCAAATTCCAGCTGGGC TTTTTCGAGAAGCTCTACAACCGCTACCTGATCATCCCGATGGCCAAGACCGCGCTGCTCAAACAGAAGCAGGCCTACGC CTGGCAGAAGCTGCGCCCGCAACAGGGGCCGGGGCGCACCGACACCTTCAACCCGACGAAAATGGTGGTGTTCGGCTTCC CGGATGACTCGACCATCGGCACTGTCGACCTGCCGCAAGTGTGGAACCAGAAACCCCGGGAATCGATGTACCTGCACTGG GACGGCAATAACAACAAGATCCACGAGCGCAACTACGCCGCTGCGATGGCGGTGGGCGCGACGCCGGAGTCGGTGCTGCC GCCGAGTTTCAACCGGGTGACCAACTGGCTGCTCGGGCACAAGGCGCCGGCGTGGCCGTGGGCACTGGATCAGGCAAAAG TCGCCCAGGGCAAACCGGTGTGGGAGGCTAACTGCGCGGGTTGTCACGATTTCGGTCGCGTCGATACCGGGCAAGTCACC ACCAACATCGACCAGCTCGGCACCGATCCGCACCGGCTGAACTCGTTCACCACCGGGCTGGTAGCGGCGTTCCACACCTT CAAGAAACCGCCGTTCGATTTCGGTGCCTATCGCAAGACCCAGAGCTACAGCAACACGCCCACCGACGGCATCTGGCTGC GTGCGCCGTACCTGCACAACGGTTCGGTGCCGACCCTGTGGGACTTGCTGCAACCGCCGGAAAAACGTCCGCAGGTGTTC ATCACCGGCTCCGATGTCTACGACCCGGTCAACGTCGGCTTCGTGACGAGTGGCGCCCAGGCCAAAGCCTCGGCGGATTT CACCTACGACACGCGTCTGGAAGGCAACCACAACAGCGGTCACCTGTACGGCACGACGCTGTCGGACGACGACAAGCGTG CGCTGATCGAATTCATGAAAACCCTGTGA
Upstream 100 bases:
>100_bases TGGACGCTCTGCGTCCGCTTTTGTGACGCGGAGCGTCACGAGATGCATTCCCCCGCGGACGGTTCGACGCTTCGACGGGG GAACGATCTGGGGAACTGAT
Downstream 100 bases:
>100_bases ACCCTTACGGATAGAGGATTTCGCCATGTCAGCGGTCGGTCATCTGAAACACGAATACGACAAGGTCAAGCTGCGCCTGC ACGGCTTGTTCACGCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISVFYMPSGFDAPRYVVHSWLCV LTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGILLYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTL IVVALLAFIGYQTWYQMLRVVPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCASDPKFTTDAVMAAINSKFQLG FFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRTDTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHW DGNNNKIHERNYAAAMAVGATPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHNGSVPTLWDLLQPPEKRPQVF ITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSGHLYGTTLSDDDKRALIEFMKTL
Sequences:
>Translated_622_residues MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISVFYMPSGFDAPRYVVHSWLCV LTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGILLYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTL IVVALLAFIGYQTWYQMLRVVPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCASDPKFTTDAVMAAINSKFQLG FFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRTDTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHW DGNNNKIHERNYAAAMAVGATPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHNGSVPTLWDLLQPPEKRPQVF ITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSGHLYGTTLSDDDKRALIEFMKTL >Mature_622_residues MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISVFYMPSGFDAPRYVVHSWLCV LTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGILLYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTL IVVALLAFIGYQTWYQMLRVVPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCASDPKFTTDAVMAAINSKFQLG FFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRTDTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHW DGNNNKIHERNYAAAMAVGATPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHNGSVPTLWDLLQPPEKRPQVF ITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSGHLYGTTLSDDDKRALIEFMKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69813; Mature: 69813
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEEEH FYMPSGFDAPRYVVHSWLCVLTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGIL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH LYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTLIVVALLAFIGYQTWYQMLRV HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCAS CCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECCC DPKFTTDAVMAAINSKFQLGFFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRT CCCCHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC DTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHWDGNNNKIHERNYAAAMAVGA CCCCCCEEEEEECCCCCCCCCEECHHHHCCCCCCCEEEEECCCCCCEECCCCEEEEEECC TPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEE TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHN ECHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECC GSVPTLWDLLQPPEKRPQVFITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSG CCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCC HLYGTTLSDDDKRALIEFMKTL EEEEECCCCCHHHHHHHHHHHC >Mature Secondary Structure MDSYIRWFQRFIWLGIAMNMVFAIPALFAPGLLTSVVGLPPQLSDPWLENAGMLLVGISV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEEEH FYMPSGFDAPRYVVHSWLCVLTRLIAVVFWIYLINTSSQGSVFVPMLMGDLSFFLILGIL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH LYLGTPPENRPLALLCDGWREWRAAWARQWQSHAFKVGTLIVVALLAFIGYQTWYQMLRV HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPEQDYSSDEDHYKYAAIGLGIEARIPYYLFSVLPQMCPEKLPKPGGWEVFGFLFENGKD CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC LPIGMAKRQIGYPTVEPNCALCHTGSYRANASDVAVNVPSAPANTLQLQAFQWFAYDCAS CCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECCC DPKFTTDAVMAAINSKFQLGFFEKLYNRYLIIPMAKTALLKQKQAYAWQKLRPQQGPGRT CCCCHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC DTFNPTKMVVFGFPDDSTIGTVDLPQVWNQKPRESMYLHWDGNNNKIHERNYAAAMAVGA CCCCCCEEEEEECCCCCCCCCEECHHHHCCCCCCCEEEEECCCCCCEECCCCEEEEEECC TPESVLPPSFNRVTNWLLGHKAPAWPWALDQAKVAQGKPVWEANCAGCHDFGRVDTGQVT CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEE TNIDQLGTDPHRLNSFTTGLVAAFHTFKKPPFDFGAYRKTQSYSNTPTDGIWLRAPYLHN ECHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECC GSVPTLWDLLQPPEKRPQVFITGSDVYDPVNVGFVTSGAQAKASADFTYDTRLEGNHNSG CCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCC HLYGTTLSDDDKRALIEFMKTL EEEEECCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]