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The map label for this gene is yeaW [H]

Identifier: 77461437

GI number: 77461437

Start: 5865053

End: 5866345

Strand: Direct

Name: yeaW [H]

Synonym: Pfl01_5216

Alternate gene names: 77461437

Gene position: 5865053-5866345 (Clockwise)

Preceding gene: 77461435

Following gene: 77461447

Centisome position: 91.09

GC content: 61.02

Gene sequence:

>1293_bases
ATGGACACCGCAAAAATCAGCCTGGGCGACCCGCTGGAACCCGCACGCAAGGCCACCGCACAAATGCTCCAGGAACGCGA
GCGCACCTATTCGCTGCCGCAACCGTTCTACAGTGACGAACGCCTGTTCGATATCGACATGCAGGAGATCTTCCAGAAAG
AGTGGTTGATCGCCGGCATGACCTGCGAGATCCCGGCCAAGGGCAACTACATCACCCTGCAGATCGGCAAGAACCCGATC
ATCGTCATTCGCGGTGCCGAAGGCGTGGTGCACGCGTTCCACAACGTCTGTCGTCACCGTGGCTCACGCCTGTGCACCAG
CGACAAGGGCAAGGTCGCCAAACTGGTCTGCCACTACCACCAGTGGACGTATGAGCTGGACGGTCGCCTGCTGTTCGCCG
GCACCGAAATGGGCGCCGACTTCGACATGAAGCAGTACGGTCTGAAACCGGTGAACGTGAAGACCGCCGGCGGTTACATC
TTCATCAGCCTGGCGGAGAACCCGCCGGCCATCGATGACTTCCTGTCGACCCTGAACCACTACATGGAACCGTACGACAT
GGAGAACACCAAGGTGGCGGTGCAAACCACCTTGATGGAAAAGGCCAACTGGAAACTGGTGCTGGAAAACAACCGCGAGT
GCTACCACTGCAGCGGTTCTCACCCGGAACTGTTGAAAACCCTGCTGGAATGGGACGACGTCACCGACCCCCGTGCCGAT
CAGGCGTTCAAGGATCACGTCGCCGCCTCCGCTGCCGCGTGGGAAGCCGAAAAGATCCCTTACGCCCACGCCAGTTTCGG
CCTGCGCAACCGCATCGTGCGCATGCCGCTGCTCAAGGGCACCGTGTCGATGACCATGGACGGCAAACAGGGCTGCGCCA
AGCTGATGGGCCGGATCAAGAACCCGGACCTGGGCTCGATGCGCATCCTGCACCTGCCGCACTCGTGGAACCACTGCATG
GGCGACCACATCATCGTGTTCACCGTGTGGCCGATCAGCGCCCAGGAAACCATGGTCACCACCAAGTGGCTGGTGCACAA
GGATGCGGTCGAAGGCGTGGATTACGACGTCGAACGCATGCGCCAGGTATGGGACGCGACCAACGATCAGGACCGTCGTC
TGGCCGAAGAGAACCAGCGCGGGATCAACTCCACCGCCTACCAGCCGGGCCCGTACTCCAAGACCTATGAGTTCGGCGTG
GTCAACTTCGTCGATTGGTACAGCGAGCGGATGCTGAGCAACCTCGGGGCCGAGCCTGCGCCGTATCTCAAGGGGGTTCC
GGTTCAGGGTTGA

Upstream 100 bases:

>100_bases
CCCACACTCGCCCCCAACACAAACAGATTCTTTACACCTTGCGCTGCAACCCTGATCAGCCACTTTCGCGGCCACGCAGA
TGGCCTTGAGGAATTCATCG

Downstream 100 bases:

>100_bases
TTCGCGTCATTGATCGTTCCCGCGCCCTGCGCGGGAACGATCAGAACGGATCACGTCGATGACCACCTCACCGATCCATC
CTCCCCGATAAACTCCTCGA

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MDTAKISLGDPLEPARKATAQMLQERERTYSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYITLQIGKNPI
IVIRGAEGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMGADFDMKQYGLKPVNVKTAGGYI
FISLAENPPAIDDFLSTLNHYMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRAD
QAFKDHVAASAAAWEAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKQGCAKLMGRIKNPDLGSMRILHLPHSWNHCM
GDHIIVFTVWPISAQETMVTTKWLVHKDAVEGVDYDVERMRQVWDATNDQDRRLAEENQRGINSTAYQPGPYSKTYEFGV
VNFVDWYSERMLSNLGAEPAPYLKGVPVQG

Sequences:

>Translated_430_residues
MDTAKISLGDPLEPARKATAQMLQERERTYSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYITLQIGKNPI
IVIRGAEGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMGADFDMKQYGLKPVNVKTAGGYI
FISLAENPPAIDDFLSTLNHYMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRAD
QAFKDHVAASAAAWEAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKQGCAKLMGRIKNPDLGSMRILHLPHSWNHCM
GDHIIVFTVWPISAQETMVTTKWLVHKDAVEGVDYDVERMRQVWDATNDQDRRLAEENQRGINSTAYQPGPYSKTYEFGV
VNFVDWYSERMLSNLGAEPAPYLKGVPVQG
>Mature_430_residues
MDTAKISLGDPLEPARKATAQMLQERERTYSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYITLQIGKNPI
IVIRGAEGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMGADFDMKQYGLKPVNVKTAGGYI
FISLAENPPAIDDFLSTLNHYMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRAD
QAFKDHVAASAAAWEAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKQGCAKLMGRIKNPDLGSMRILHLPHSWNHCM
GDHIIVFTVWPISAQETMVTTKWLVHKDAVEGVDYDVERMRQVWDATNDQDRRLAEENQRGINSTAYQPGPYSKTYEFGV
VNFVDWYSERMLSNLGAEPAPYLKGVPVQG

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=199, Percent_Identity=32.1608040201005, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI1788888, Length=211, Percent_Identity=27.0142180094787, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 48808; Mature: 48808

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTAKISLGDPLEPARKATAQMLQERERTYSLPQPFYSDERLFDIDMQEIFQKEWLIAGM
CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHEEECE
TCEIPAKGNYITLQIGKNPIIVIRGAEGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYH
EEECCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
QWTYELDGRLLFAGTEMGADFDMKQYGLKPVNVKTAGGYIFISLAENPPAIDDFLSTLNH
HEEEEECCEEEEEECCCCCCCCHHHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHH
YMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRAD
HCCCCCCCCCEEEEEEEEHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCHH
QAFKDHVAASAAAWEAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKQGCAKLMGRIK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCEEEEEECCHHHHHHHHHCCC
NPDLGSMRILHLPHSWNHCMGDHIIVFTVWPISAQETMVTTKWLVHKDAVEGVDYDVERM
CCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCHHEEHHHHHHHHHHHCCCCCCHHHH
RQVWDATNDQDRRLAEENQRGINSTAYQPGPYSKTYEFGVVNFVDWYSERMLSNLGAEPA
HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCC
PYLKGVPVQG
CCCCCCCCCC
>Mature Secondary Structure
MDTAKISLGDPLEPARKATAQMLQERERTYSLPQPFYSDERLFDIDMQEIFQKEWLIAGM
CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHEEECE
TCEIPAKGNYITLQIGKNPIIVIRGAEGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYH
EEECCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
QWTYELDGRLLFAGTEMGADFDMKQYGLKPVNVKTAGGYIFISLAENPPAIDDFLSTLNH
HEEEEECCEEEEEECCCCCCCCHHHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHH
YMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRAD
HCCCCCCCCCEEEEEEEEHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCHH
QAFKDHVAASAAAWEAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKQGCAKLMGRIK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCEEEEEECCHHHHHHHHHCCC
NPDLGSMRILHLPHSWNHCMGDHIIVFTVWPISAQETMVTTKWLVHKDAVEGVDYDVERM
CCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCHHEEHHHHHHHHHHHCCCCCCHHHH
RQVWDATNDQDRRLAEENQRGINSTAYQPGPYSKTYEFGVVNFVDWYSERMLSNLGAEPA
HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCC
PYLKGVPVQG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]