| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461434
Identifier: 77461434
GI number: 77461434
Start: 5861772
End: 5863220
Strand: Direct
Name: 77461434
Synonym: Pfl01_5213
Alternate gene names: NA
Gene position: 5861772-5863220 (Clockwise)
Preceding gene: 77461433
Following gene: 77461435
Centisome position: 91.04
GC content: 57.28
Gene sequence:
>1449_bases TTGAACCCTCGACCACATGATCCCTGCGGCGTTGAGGATGCCGCCGGCAATCTGCTCGGCCAGGCGCTGACCGCCAGTGC TCGCCATCTGGCGTTCGGCATCGCGCGTGTGCAGTTCAATCAACAAGTCGCATATTTCGCCAAGCACATCACCGATGAGG TTGCCGCCGGACGCCTGACTCCGGAGCAGGGAATCCTTGCGCTTGTGCAGGAACAACACAACCTGCTGAACCAGTCTCGG ATCCTGCAGCAAAACAGGCACGGAGCGATCACCGGCACGGCCAAGGCACGACGCTTGTCGATGCTCCCACAGCCTGCAGC AACTCCCGATCCGGAACGTCTGCTGCGGGCCGCTCACCAGCAGAACCTGAAAGTGACACGCCCGAACTCAGCCCCGCCCT CCTCTCCGCGTCCGGTCAACGACTTGCGAATGGTTCCCCGCGAGCATTGGCCGCAGGAGCTGCCGGCGCCCGAAGAGCCA GGGTTCTACATCGTGCCCAAAAGCGTGTCCGCCGAGAAACTTCAGGCGCAGCTGTTTGCGTCGCCAAACCCGAGTGTCAT CGCCAAATTCAAAAGCCTGAATCCACTGGAGGACGTGGTGAAGGCCGGATCGATGATTGTTCTGAGTGATCCAGACAATC AGCAATGCACCTATGAAGAATCACTGCTGATGGAAACCGCGCACATCGTCAGCATGGCGCTGGCGCCGTTGACGGTGGAA GAGGCGGACTTTTTTGCCCAGCACTATGAGGTCATCAGACGGACGCTTTCAGATGGGTCAAAAGTTATTGGGGTTGGTAC TGCCATGGCGGCTAATCATCTGGATGGCATAAAAGCCGCTTTGAAAGAAATTGAGGCATTGCATATCAGCACTATCGAGA CCAATGGCAGCCTGAACTCAAAAGCATTCAAAAAGCGGCGCGCCGAATTACTTCAACGGCTGGACGGACAGCTAACCGGA TTGACGAAGAAAGTCATTGGCCTCCCTGATCACCCAAACCTCAAGATCGCTCTAGGAATCGAGCATCCGCACCTGGTGCA CCGCTGGAGGAAGGCTGGCGGCATCGGCCAGCCGCCCGGGTACGCCACTCACATTCAAGGCGTGGTGAAAGCCTCGCAAT ACGTAAAATATGGCGGATGGATTGGTACGGCCGTGGCTGGCGGAGCCTCGGTAATGAAGGTTCAGGATGTCTGTACGAAC GAGAACGCCGAGGAGTGCGAAAAGATTAAATTCACCGAAACCGGAAGTTTTCTGGGTGGAGCTGTCGGTTCTGCTGTAGG TGCAAGCACGGCCTCCACCATTTGCGTAGCACTCGGGGTATCCAGTGCAGGAATCGGTGGGGCACTGTGCGGGATCGTGG TTGCGGGAGCCGGATCCTTTACGGTCGGCTATATGGGCGAAAAAGGCGGCGAAATCGCCGGTGAATTGATTTACGAGAAA ACCCGATGA
Upstream 100 bases:
>100_bases ACGCTCAACCTCAAGAACAACTGGCCATTCGTTACCGCGGCATCAGTTGGGTACACCACATTGCGGGCACCACCGGCCAT ACCTCGTGGGGTAGCCAGGA
Downstream 100 bases:
>100_bases GTTATGAAACTGCAAGAGATGCCTTTATCATTCTAAACATCATAAACGTCGCCGCACTCATAATAATTAACTGCATCGTT TTATATATCGCAAAAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MNPRPHDPCGVEDAAGNLLGQALTASARHLAFGIARVQFNQQVAYFAKHITDEVAAGRLTPEQGILALVQEQHNLLNQSR ILQQNRHGAITGTAKARRLSMLPQPAATPDPERLLRAAHQQNLKVTRPNSAPPSSPRPVNDLRMVPREHWPQELPAPEEP GFYIVPKSVSAEKLQAQLFASPNPSVIAKFKSLNPLEDVVKAGSMIVLSDPDNQQCTYEESLLMETAHIVSMALAPLTVE EADFFAQHYEVIRRTLSDGSKVIGVGTAMAANHLDGIKAALKEIEALHISTIETNGSLNSKAFKKRRAELLQRLDGQLTG LTKKVIGLPDHPNLKIALGIEHPHLVHRWRKAGGIGQPPGYATHIQGVVKASQYVKYGGWIGTAVAGGASVMKVQDVCTN ENAEECEKIKFTETGSFLGGAVGSAVGASTASTICVALGVSSAGIGGALCGIVVAGAGSFTVGYMGEKGGEIAGELIYEK TR
Sequences:
>Translated_482_residues MNPRPHDPCGVEDAAGNLLGQALTASARHLAFGIARVQFNQQVAYFAKHITDEVAAGRLTPEQGILALVQEQHNLLNQSR ILQQNRHGAITGTAKARRLSMLPQPAATPDPERLLRAAHQQNLKVTRPNSAPPSSPRPVNDLRMVPREHWPQELPAPEEP GFYIVPKSVSAEKLQAQLFASPNPSVIAKFKSLNPLEDVVKAGSMIVLSDPDNQQCTYEESLLMETAHIVSMALAPLTVE EADFFAQHYEVIRRTLSDGSKVIGVGTAMAANHLDGIKAALKEIEALHISTIETNGSLNSKAFKKRRAELLQRLDGQLTG LTKKVIGLPDHPNLKIALGIEHPHLVHRWRKAGGIGQPPGYATHIQGVVKASQYVKYGGWIGTAVAGGASVMKVQDVCTN ENAEECEKIKFTETGSFLGGAVGSAVGASTASTICVALGVSSAGIGGALCGIVVAGAGSFTVGYMGEKGGEIAGELIYEK TR >Mature_482_residues MNPRPHDPCGVEDAAGNLLGQALTASARHLAFGIARVQFNQQVAYFAKHITDEVAAGRLTPEQGILALVQEQHNLLNQSR ILQQNRHGAITGTAKARRLSMLPQPAATPDPERLLRAAHQQNLKVTRPNSAPPSSPRPVNDLRMVPREHWPQELPAPEEP GFYIVPKSVSAEKLQAQLFASPNPSVIAKFKSLNPLEDVVKAGSMIVLSDPDNQQCTYEESLLMETAHIVSMALAPLTVE EADFFAQHYEVIRRTLSDGSKVIGVGTAMAANHLDGIKAALKEIEALHISTIETNGSLNSKAFKKRRAELLQRLDGQLTG LTKKVIGLPDHPNLKIALGIEHPHLVHRWRKAGGIGQPPGYATHIQGVVKASQYVKYGGWIGTAVAGGASVMKVQDVCTN ENAEECEKIKFTETGSFLGGAVGSAVGASTASTICVALGVSSAGIGGALCGIVVAGAGSFTVGYMGEKGGEIAGELIYEK TR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51366; Mature: 51366
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPRPHDPCGVEDAAGNLLGQALTASARHLAFGIARVQFNQQVAYFAKHITDEVAAGRLT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEQGILALVQEQHNLLNQSRILQQNRHGAITGTAKARRLSMLPQPAATPDPERLLRAAHQ CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCCCCHHHHHHHHHH QNLKVTRPNSAPPSSPRPVNDLRMVPREHWPQELPAPEEPGFYIVPKSVSAEKLQAQLFA CCCEEECCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHC SPNPSVIAKFKSLNPLEDVVKAGSMIVLSDPDNQQCTYEESLLMETAHIVSMALAPLTVE CCCHHHEEEECCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH EADFFAQHYEVIRRTLSDGSKVIGVGTAMAANHLDGIKAALKEIEALHISTIETNGSLNS HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCH KAFKKRRAELLQRLDGQLTGLTKKVIGLPDHPNLKIALGIEHPHLVHRWRKAGGIGQPPG HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCC YATHIQGVVKASQYVKYGGWIGTAVAGGASVMKVQDVCTNENAEECEKIKFTETGSFLGG HHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEHHHHHCCCCHHHHHHEEEECCCCHHHH AVGSAVGASTASTICVALGVSSAGIGGALCGIVVAGAGSFTVGYMGEKGGEIAGELIYEK HHHHHHCCHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCC TR CC >Mature Secondary Structure MNPRPHDPCGVEDAAGNLLGQALTASARHLAFGIARVQFNQQVAYFAKHITDEVAAGRLT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEQGILALVQEQHNLLNQSRILQQNRHGAITGTAKARRLSMLPQPAATPDPERLLRAAHQ CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCCCCHHHHHHHHHH QNLKVTRPNSAPPSSPRPVNDLRMVPREHWPQELPAPEEPGFYIVPKSVSAEKLQAQLFA CCCEEECCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHC SPNPSVIAKFKSLNPLEDVVKAGSMIVLSDPDNQQCTYEESLLMETAHIVSMALAPLTVE CCCHHHEEEECCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH EADFFAQHYEVIRRTLSDGSKVIGVGTAMAANHLDGIKAALKEIEALHISTIETNGSLNS HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCH KAFKKRRAELLQRLDGQLTGLTKKVIGLPDHPNLKIALGIEHPHLVHRWRKAGGIGQPPG HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCC YATHIQGVVKASQYVKYGGWIGTAVAGGASVMKVQDVCTNENAEECEKIKFTETGSFLGG HHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEHHHHHCCCCHHHHHHEEEECCCCHHHH AVGSAVGASTASTICVALGVSSAGIGGALCGIVVAGAGSFTVGYMGEKGGEIAGELIYEK HHHHHHCCHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCC TR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA