| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461420
Identifier: 77461420
GI number: 77461420
Start: 5847460
End: 5848017
Strand: Reverse
Name: 77461420
Synonym: Pfl01_5199
Alternate gene names: NA
Gene position: 5848017-5847460 (Counterclockwise)
Preceding gene: 77461423
Following gene: 77461418
Centisome position: 90.83
GC content: 64.52
Gene sequence:
>558_bases ATGAAGATTTCACGCGGTTTTGCCCTGGCATCGCTCCTGACCCTGGCGGCAGGGCCGGTGTTTGCCGGTTTCAGTTTGAA TGACGTGGCCGGTGCGGTATCGGGCATGCAGGGCGGGGACAAGGCCGCCGCCGCGGCACCGACCTCGGAAACCGCCGGTC TGTTGAGTGCCTTGAGCGCGCTGAACGTCACGCCGCAGCAAGCGGTCGGCGGCACCAGTGCGATGTTGGGACTGGCGAAG AACCAGCTGAGCAACACGGACTATTCCGAGCTGGCCAAGGAAGTGCCGGGCATCGACAAGCTGTCGGGCGGCGCTGGTAA TCTGGCGGCGCTGAGCGGCTTGCTCGGCTCTTCGGGCAAGTCCGCCGGGCTGGAAAATGCGCTGGGCAACGTCAAGGACA CCAATGACCTGAACAACGCCTTCGGTGCGCTGGGCATGGACAGCGGGATGGTCGGCCAGTTTGCCCCGATCCTCCTGCAA TACCTCGGTCAGCAGGGTGTCGGCGGTTCGTTGCTGCAAAGCCTGGGCAGCATCTGGGGCACCGGCACCAACGGTTGA
Upstream 100 bases:
>100_bases ATGGATGCGCTACGCTCGGAACATGCCGGCGGATACTCGGTCAAACCGGCAGTTTTCCCCTTCGTCGACGAAGGGTTTCA TGCCACAAGAGGATGTCTGA
Downstream 100 bases:
>100_bases CTCAGCGGCGCTCGCCCTTGAGTTCGGCGATGCGCTGATCCTTGAGGGTCCAGAGCTGGTTGACCCAGTTCTGGACCTTT TCGCGAAACACCGGATCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKISRGFALASLLTLAAGPVFAGFSLNDVAGAVSGMQGGDKAAAAAPTSETAGLLSALSALNVTPQQAVGGTSAMLGLAK NQLSNTDYSELAKEVPGIDKLSGGAGNLAALSGLLGSSGKSAGLENALGNVKDTNDLNNAFGALGMDSGMVGQFAPILLQ YLGQQGVGGSLLQSLGSIWGTGTNG
Sequences:
>Translated_185_residues MKISRGFALASLLTLAAGPVFAGFSLNDVAGAVSGMQGGDKAAAAAPTSETAGLLSALSALNVTPQQAVGGTSAMLGLAK NQLSNTDYSELAKEVPGIDKLSGGAGNLAALSGLLGSSGKSAGLENALGNVKDTNDLNNAFGALGMDSGMVGQFAPILLQ YLGQQGVGGSLLQSLGSIWGTGTNG >Mature_185_residues MKISRGFALASLLTLAAGPVFAGFSLNDVAGAVSGMQGGDKAAAAAPTSETAGLLSALSALNVTPQQAVGGTSAMLGLAK NQLSNTDYSELAKEVPGIDKLSGGAGNLAALSGLLGSSGKSAGLENALGNVKDTNDLNNAFGALGMDSGMVGQFAPILLQ YLGQQGVGGSLLQSLGSIWGTGTNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18015; Mature: 18015
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISRGFALASLLTLAAGPVFAGFSLNDVAGAVSGMQGGDKAAAAAPTSETAGLLSALSA CCCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHH LNVTPQQAVGGTSAMLGLAKNQLSNTDYSELAKEVPGIDKLSGGAGNLAALSGLLGSSGK HCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC SAGLENALGNVKDTNDLNNAFGALGMDSGMVGQFAPILLQYLGQQGVGGSLLQSLGSIWG CCCHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC TGTNG CCCCC >Mature Secondary Structure MKISRGFALASLLTLAAGPVFAGFSLNDVAGAVSGMQGGDKAAAAAPTSETAGLLSALSA CCCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHH LNVTPQQAVGGTSAMLGLAKNQLSNTDYSELAKEVPGIDKLSGGAGNLAALSGLLGSSGK HCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC SAGLENALGNVKDTNDLNNAFGALGMDSGMVGQFAPILLQYLGQQGVGGSLLQSLGSIWG CCCHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC TGTNG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA