| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is yihG [H]
Identifier: 77461419
GI number: 77461419
Start: 5846538
End: 5847458
Strand: Direct
Name: yihG [H]
Synonym: Pfl01_5198
Alternate gene names: 77461419
Gene position: 5846538-5847458 (Clockwise)
Preceding gene: 77461415
Following gene: 77461421
Centisome position: 90.81
GC content: 61.02
Gene sequence:
>921_bases ATGGCGCGCCCATCCGTTTTCCAAGAGTTGCTTATGCGCCGCCTGCTCACCGGCTGTTTCGTCACCCTGCTGCTGTTGTC CAACACCCTCGTGCTGTTCGGCCCGCTGATGGTGTTCGCCCTGCTCAAGCTGATCCTGCCGGGGCGCTTTCGCGACTACG CCTCGTGGGCGGTGATGTGGATCGCCGAAACCTGGGCGGAAATCGACAAGCTGATCTTCCGCCTGTGCATCCCCACGCAA TGGGACATTCGCGGCGGCGAAAACCTGCGCAGCGACACTTCCTACCTGGTGATCAGCAATCATCAGTCCTGGGTCGATAT CCCGGCGCTGATCCAGACCCTCAACCGGCGCACGCCGTTCTTCAAGTTCTTCCTCAAGAAAGAGCTGATCTGGGTGCCGT TCCTGGGCCTGGCCTGGTGGGCGCTGGATTACCCGTTCATGAAGCGCTACACCAAGGCGTTCCTGGCGAAGAACCCCGAG CTGGCCGGCAAGGATCTGGAAATTACCAAAGCCGCCTGCGAGCTGTTCAAGCGCCAGCCGGTGACGGTGGTGAATTATCT GGAAGGCACCCGTTACACCGCCGCCAAAAGCACTCAGCAGCAGTCTCCGTTCAGTCACCTGCTCAAGCCCAAGGCGGGCG GCGTGGCGTTCGTGCTGGCGGCGATGGGCGAACAGCTGGACGCGATTCTCGATGTGACCGTGGTTTATCCACAGCAGAAG ATTCCGGGGTTCTGGGACCTGATCAGCGGCAACGTGCCGCGCGTGATCATCGACATCCAGACCCGCGAGCTGGATCCGGC CCTGTGGCAGGGTGATTACGAAAACGATCCGGTGTTTCGCGAAAAGGTCCAGAACTGGGTCAACCAGCTCTGGACCCTCA AGGATCAGCGCATCGCCGAACTCAAGGGCGAGCGCCGCTGA
Upstream 100 bases:
>100_bases TTTAGACCGTTGTTCGCATGAACGTTCCCGGCAGGTTATCGCGCCACAGGTGAAACATTCGTCACCGGCGGATTTGGCCT GTCGGCCGAAGCCACTTATC
Downstream 100 bases:
>100_bases GTCAACCGTTGGTGCCGGTGCCCCAGATGCTGCCCAGGCTTTGCAGCAACGAACCGCCGACACCCTGCTGACCGAGGTAT TGCAGGAGGATCGGGGCAAA
Product: putative acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MARPSVFQELLMRRLLTGCFVTLLLLSNTLVLFGPLMVFALLKLILPGRFRDYASWAVMWIAETWAEIDKLIFRLCIPTQ WDIRGGENLRSDTSYLVISNHQSWVDIPALIQTLNRRTPFFKFFLKKELIWVPFLGLAWWALDYPFMKRYTKAFLAKNPE LAGKDLEITKAACELFKRQPVTVVNYLEGTRYTAAKSTQQQSPFSHLLKPKAGGVAFVLAAMGEQLDAILDVTVVYPQQK IPGFWDLISGNVPRVIIDIQTRELDPALWQGDYENDPVFREKVQNWVNQLWTLKDQRIAELKGERR
Sequences:
>Translated_306_residues MARPSVFQELLMRRLLTGCFVTLLLLSNTLVLFGPLMVFALLKLILPGRFRDYASWAVMWIAETWAEIDKLIFRLCIPTQ WDIRGGENLRSDTSYLVISNHQSWVDIPALIQTLNRRTPFFKFFLKKELIWVPFLGLAWWALDYPFMKRYTKAFLAKNPE LAGKDLEITKAACELFKRQPVTVVNYLEGTRYTAAKSTQQQSPFSHLLKPKAGGVAFVLAAMGEQLDAILDVTVVYPQQK IPGFWDLISGNVPRVIIDIQTRELDPALWQGDYENDPVFREKVQNWVNQLWTLKDQRIAELKGERR >Mature_305_residues ARPSVFQELLMRRLLTGCFVTLLLLSNTLVLFGPLMVFALLKLILPGRFRDYASWAVMWIAETWAEIDKLIFRLCIPTQW DIRGGENLRSDTSYLVISNHQSWVDIPALIQTLNRRTPFFKFFLKKELIWVPFLGLAWWALDYPFMKRYTKAFLAKNPEL AGKDLEITKAACELFKRQPVTVVNYLEGTRYTAAKSTQQQSPFSHLLKPKAGGVAFVLAAMGEQLDAILDVTVVYPQQKI PGFWDLISGNVPRVIIDIQTRELDPALWQGDYENDPVFREKVQNWVNQLWTLKDQRIAELKGERR
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790293, Length=315, Percent_Identity=37.7777777777778, Blast_Score=233, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: NA
Molecular weight: Translated: 35397; Mature: 35266
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPSVFQELLMRRLLTGCFVTLLLLSNTLVLFGPLMVFALLKLILPGRFRDYASWAVMW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IAETWAEIDKLIFRLCIPTQWDIRGGENLRSDTSYLVISNHQSWVDIPALIQTLNRRTPF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCHH FKFFLKKELIWVPFLGLAWWALDYPFMKRYTKAFLAKNPELAGKDLEITKAACELFKRQP HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC VTVVNYLEGTRYTAAKSTQQQSPFSHLLKPKAGGVAFVLAAMGEQLDAILDVTVVYPQQK CHHHHHHCCCCCHHHHCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC IPGFWDLISGNVPRVIIDIQTRELDPALWQGDYENDPVFREKVQNWVNQLWTLKDQRIAE CCCHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH LKGERR HCCCCC >Mature Secondary Structure ARPSVFQELLMRRLLTGCFVTLLLLSNTLVLFGPLMVFALLKLILPGRFRDYASWAVMW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IAETWAEIDKLIFRLCIPTQWDIRGGENLRSDTSYLVISNHQSWVDIPALIQTLNRRTPF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCHH FKFFLKKELIWVPFLGLAWWALDYPFMKRYTKAFLAKNPELAGKDLEITKAACELFKRQP HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC VTVVNYLEGTRYTAAKSTQQQSPFSHLLKPKAGGVAFVLAAMGEQLDAILDVTVVYPQQK CHHHHHHCCCCCHHHHCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC IPGFWDLISGNVPRVIIDIQTRELDPALWQGDYENDPVFREKVQNWVNQLWTLKDQRIAE CCCHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH LKGERR HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]