Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is fct [H]

Identifier: 77461410

GI number: 77461410

Start: 5836559

End: 5838985

Strand: Direct

Name: fct [H]

Synonym: Pfl01_5189

Alternate gene names: 77461410

Gene position: 5836559-5838985 (Clockwise)

Preceding gene: 77461409

Following gene: 77461411

Centisome position: 90.65

GC content: 63.37

Gene sequence:

>2427_bases
ATGTCCCGTTCGCTAGACACCTTGTTGCGCCCCAGTTTGCTGGCGGTCGCCATTGCCCTCTGCACCCCGCTGGCCAGCAG
CCAACTGATCGCCGCTGAACAGGCGTCGAGCGTACGCGCCTACAACCTGCCGGCGGCTCCGTTGTCGACCACGCTGAACC
AGATCGCCAGCCAGGGCGGCCTCACGCTGTCGCTGAACCCGTCGCTGGCGGCGGGCAAGACCTCGGCGCCGGTCAACGGC
CAATATGACGCGGCCGGCGCCCTGCGCGCGGCACTGCGCGGCACCGGTCTGCAACTGGAACAGAGCGGCGCCGGCACCTA
CACCCTGGTCGCCGTGCCGGAAGGCGTGATGGCCCTGCCGGAAACCTCGGTGATCGGCGTGGAAAACTACGAAAGCGCCT
GGGGCCCGGTCGAAGGCTACACCGCCACCCGCACCGCCGCCGGCACCAAGACCGACACTGCACTGGTCGAAGCACCGCGT
TCGATTTCGGTCGCCACTCGCCAGCAAATGGAAGACCGTGGCGTGCACAGCCTCGATGACGCCGTGCGCTACATGCCGGG
CATCACCGCCAGCAGCTACGGCAGCGACACTCGCGCCGACTGGCTGCGCGTGCGCGGCTTCGAACCGACCCAGTTCCTCG
ACGGCCTGCCCCTGCCAAAAGGCGTGTACGCCAACCCGAAACAGGAAACCTGGAACCTCGACCGCCTCGCCCTGCTGCGC
GGCCCGGCCTCGTCGGTATACGGCCAGACCCCACCGGGCGGTTTGCTGGACATGGTCAGCCGTCGCCCGAGCGATGTGCA
GAGCAACGAAATCCAGCTGCAATACGGCAGCGACAACCACCGCCAGATCAACTTCGCCAGCACCGGCAAGATCGATGACG
CTGGCCAGTTTCTCTACGGCCTCAGCGGTGTGGTACGTGACAGCGGCACGCAGATCGACCACGTCGACAACAAGCGCTAC
AACATCGCGCCGAGCCTGACCTGGAACATCGACGACGACACCAGATTCACCCTGCTGACCCAGTTCACCCGCGACGATAC
CGGCATCACCAGCCAGTTCCTGCCGGTGCAGGGCACCAAGATCGACATGCCGTTCGGCAAGGTTTCCCATCACAAGAACC
TCGGCGATCCGGACTGGGAATACTACGACCGCACCTACTACGCGTTGGGCTATGCCTTCGAACATCGCCTGAACGATGTG
TGGCAGTTCAAGCAGAACCTGCGCTACACCAAGTCGGATCTGTCGTTCCAGGGCATCACCGTCGGCTCCTACCCGTTCAC
TCAAGTGGACAATGACGGCAACGTCGGCCGCACGACCACCATCGTCGACGAAGACATCAGCCAGTTCGCCGTGGACAACA
ACTTCCAGGCCGACTTCGCCACCGGCGACATCCGCCACACCCTGCTGCTGGGTCTGGATCACCAGCGCAGCAACACCAAC
TACACCTCGATCTTCGGCAGCGCGCCGGAGATCAACGTGAACAATCCGATCCATGGTCAGCCGATCGTGCGTCCGGCGCG
CTCCACCGCGTTCTATGACTACAACCAGAAGACCTACCAGACCGGCCTCTACGTTCAGGACCAGATGGCCCTGGACCAAT
GGCGCCTGACCCTGGGCGGTCGTGAAGACTGGGTGCACACCAGCACGCAATTCATCAACAAGGGCGACGCCACCAACACC
CAGCGTGACAAGGCGTTCAGCGGTAACGCGGCGATCAGCTATGTCTTCGACTCCGGTTTCGTGCCGTACCTGTCCTACGC
CGAATCGTTCCAGCCGACCACTGGCGCCGACGCCTCGTCGACCGAATCGCTCAAACCGACCGAAGGCAAGCAGTGGGAAC
TGGGCATCAAGTACCAGCCACCGGGCAGCAAGACCCTGCTGACGGCGGCCGTGTATGACCTGACCCAGAAAAACGTTTCG
GTCAGCTCGTTCGTCAACGGCGTATCGATCACCAGCCAGACCGGCGAAGTGAAGGTCAAAGGCCTGGAGCTGGAAGCCGT
CTCCGACGTCACCGATAACCTGAAGGTCATCGCCGCGTACACCCTGGCCAAATCCGAAGTGCAGAACGGCGCCGACAAGG
GCAACCGCCTGCAACTGATGCCGAACCAGCAAGCCTCGCTGTGGGCCGATTACAGCTGGCACAGCGGTGTGCTCGACGGC
TTCGGCATCGGCGCCGGCGCGCGCTACACCGGCAACACCTACGGCGACAAAGCCAATACCTGGCTGGGCAAGGCGGACGC
GTACACCGTGTTCGACGCCGCCGTGCATTACGACCTCGGCCGTCTGGACAACAGCCTCAAAGGCGCGTCGCTGGCACTCA
ACGCCACCAATTTGCTGGACAAGGACTACATCTCCACTTGCGACAGCTTCTACTGCTACTACGGCGACCAGCGCAGTGTC
GTCGCCAGCGCCACTTACAAGTGGTAA

Upstream 100 bases:

>100_bases
TCGTTCGTTAATCGAAATTATTTTCATCCAGCCCTATCACTTTTCGAATCTCGTCCGGCACACAGGCAATTGAGAAATAT
TTCCATTCAGGAGCCGCCGT

Downstream 100 bases:

>100_bases
GCGCCTGAGCTGAACAGGCCCTGCAACCAGGCCGTCCCTCGTGGACGGCTTGGGTGTTTTTGAAGGTCATGAAATGAAAA
GTAAAACAATTCGCCGCTGG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 808; Mature: 807

Protein sequence:

>808_residues
MSRSLDTLLRPSLLAVAIALCTPLASSQLIAAEQASSVRAYNLPAAPLSTTLNQIASQGGLTLSLNPSLAAGKTSAPVNG
QYDAAGALRAALRGTGLQLEQSGAGTYTLVAVPEGVMALPETSVIGVENYESAWGPVEGYTATRTAAGTKTDTALVEAPR
SISVATRQQMEDRGVHSLDDAVRYMPGITASSYGSDTRADWLRVRGFEPTQFLDGLPLPKGVYANPKQETWNLDRLALLR
GPASSVYGQTPPGGLLDMVSRRPSDVQSNEIQLQYGSDNHRQINFASTGKIDDAGQFLYGLSGVVRDSGTQIDHVDNKRY
NIAPSLTWNIDDDTRFTLLTQFTRDDTGITSQFLPVQGTKIDMPFGKVSHHKNLGDPDWEYYDRTYYALGYAFEHRLNDV
WQFKQNLRYTKSDLSFQGITVGSYPFTQVDNDGNVGRTTTIVDEDISQFAVDNNFQADFATGDIRHTLLLGLDHQRSNTN
YTSIFGSAPEINVNNPIHGQPIVRPARSTAFYDYNQKTYQTGLYVQDQMALDQWRLTLGGREDWVHTSTQFINKGDATNT
QRDKAFSGNAAISYVFDSGFVPYLSYAESFQPTTGADASSTESLKPTEGKQWELGIKYQPPGSKTLLTAAVYDLTQKNVS
VSSFVNGVSITSQTGEVKVKGLELEAVSDVTDNLKVIAAYTLAKSEVQNGADKGNRLQLMPNQQASLWADYSWHSGVLDG
FGIGAGARYTGNTYGDKANTWLGKADAYTVFDAAVHYDLGRLDNSLKGASLALNATNLLDKDYISTCDSFYCYYGDQRSV
VASATYKW

Sequences:

>Translated_808_residues
MSRSLDTLLRPSLLAVAIALCTPLASSQLIAAEQASSVRAYNLPAAPLSTTLNQIASQGGLTLSLNPSLAAGKTSAPVNG
QYDAAGALRAALRGTGLQLEQSGAGTYTLVAVPEGVMALPETSVIGVENYESAWGPVEGYTATRTAAGTKTDTALVEAPR
SISVATRQQMEDRGVHSLDDAVRYMPGITASSYGSDTRADWLRVRGFEPTQFLDGLPLPKGVYANPKQETWNLDRLALLR
GPASSVYGQTPPGGLLDMVSRRPSDVQSNEIQLQYGSDNHRQINFASTGKIDDAGQFLYGLSGVVRDSGTQIDHVDNKRY
NIAPSLTWNIDDDTRFTLLTQFTRDDTGITSQFLPVQGTKIDMPFGKVSHHKNLGDPDWEYYDRTYYALGYAFEHRLNDV
WQFKQNLRYTKSDLSFQGITVGSYPFTQVDNDGNVGRTTTIVDEDISQFAVDNNFQADFATGDIRHTLLLGLDHQRSNTN
YTSIFGSAPEINVNNPIHGQPIVRPARSTAFYDYNQKTYQTGLYVQDQMALDQWRLTLGGREDWVHTSTQFINKGDATNT
QRDKAFSGNAAISYVFDSGFVPYLSYAESFQPTTGADASSTESLKPTEGKQWELGIKYQPPGSKTLLTAAVYDLTQKNVS
VSSFVNGVSITSQTGEVKVKGLELEAVSDVTDNLKVIAAYTLAKSEVQNGADKGNRLQLMPNQQASLWADYSWHSGVLDG
FGIGAGARYTGNTYGDKANTWLGKADAYTVFDAAVHYDLGRLDNSLKGASLALNATNLLDKDYISTCDSFYCYYGDQRSV
VASATYKW
>Mature_807_residues
SRSLDTLLRPSLLAVAIALCTPLASSQLIAAEQASSVRAYNLPAAPLSTTLNQIASQGGLTLSLNPSLAAGKTSAPVNGQ
YDAAGALRAALRGTGLQLEQSGAGTYTLVAVPEGVMALPETSVIGVENYESAWGPVEGYTATRTAAGTKTDTALVEAPRS
ISVATRQQMEDRGVHSLDDAVRYMPGITASSYGSDTRADWLRVRGFEPTQFLDGLPLPKGVYANPKQETWNLDRLALLRG
PASSVYGQTPPGGLLDMVSRRPSDVQSNEIQLQYGSDNHRQINFASTGKIDDAGQFLYGLSGVVRDSGTQIDHVDNKRYN
IAPSLTWNIDDDTRFTLLTQFTRDDTGITSQFLPVQGTKIDMPFGKVSHHKNLGDPDWEYYDRTYYALGYAFEHRLNDVW
QFKQNLRYTKSDLSFQGITVGSYPFTQVDNDGNVGRTTTIVDEDISQFAVDNNFQADFATGDIRHTLLLGLDHQRSNTNY
TSIFGSAPEINVNNPIHGQPIVRPARSTAFYDYNQKTYQTGLYVQDQMALDQWRLTLGGREDWVHTSTQFINKGDATNTQ
RDKAFSGNAAISYVFDSGFVPYLSYAESFQPTTGADASSTESLKPTEGKQWELGIKYQPPGSKTLLTAAVYDLTQKNVSV
SSFVNGVSITSQTGEVKVKGLELEAVSDVTDNLKVIAAYTLAKSEVQNGADKGNRLQLMPNQQASLWADYSWHSGVLDGF
GIGAGARYTGNTYGDKANTWLGKADAYTVFDAAVHYDLGRLDNSLKGASLALNATNLLDKDYISTCDSFYCYYGDQRSVV
ASATYKW

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=708, Percent_Identity=36.2994350282486, Blast_Score=425, Evalue=1e-120,
Organism=Escherichia coli, GI1787024, Length=729, Percent_Identity=26.2002743484225, Blast_Score=160, Evalue=4e-40,
Organism=Escherichia coli, GI1787344, Length=772, Percent_Identity=22.5388601036269, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1790743, Length=798, Percent_Identity=22.6817042606516, Blast_Score=106, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 88089; Mature: 87958

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSLDTLLRPSLLAVAIALCTPLASSQLIAAEQASSVRAYNLPAAPLSTTLNQIASQGG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCEEEECCCCCHHHHHHHHHHHCCC
LTLSLNPSLAAGKTSAPVNGQYDAAGALRAALRGTGLQLEQSGAGTYTLVAVPEGVMALP
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCEECC
ETSVIGVENYESAWGPVEGYTATRTAAGTKTDTALVEAPRSISVATRQQMEDRGVHSLDD
CCEEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCHHHHH
AVRYMPGITASSYGSDTRADWLRVRGFEPTQFLDGLPLPKGVYANPKQETWNLDRLALLR
HHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC
GPASSVYGQTPPGGLLDMVSRRPSDVQSNEIQLQYGSDNHRQINFASTGKIDDAGQFLYG
CCHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHH
LSGVVRDSGTQIDHVDNKRYNIAPSLTWNIDDDTRFTLLTQFTRDDTGITSQFLPVQGTK
HHHHCCCCCCEEECCCCCCEEECCEEEEECCCCCEEEEEEEECCCCCCCCCEEEECCCCE
IDMPFGKVSHHKNLGDPDWEYYDRTYYALGYAFEHRLNDVWQFKQNLRYTKSDLSFQGIT
EECCCCHHHCCCCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
VGSYPFTQVDNDGNVGRTTTIVDEDISQFAVDNNFQADFATGDIRHTLLLGLDHQRSNTN
ECCCCCEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCEECCCCCEEEEEEECCCCCCCCC
YTSIFGSAPEINVNNPIHGQPIVRPARSTAFYDYNQKTYQTGLYVQDQMALDQWRLTLGG
EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCEEEHHHHHHHEEEEECC
REDWVHTSTQFINKGDATNTQRDKAFSGNAAISYVFDSGFVPYLSYAESFQPTTGADASS
CCCCEECHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCC
TESLKPTEGKQWELGIKYQPPGSKTLLTAAVYDLTQKNVSVSSFVNGVSITSQTGEVKVK
CCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHCCCCHHHHHCCEEEECCCCCEEEE
GLELEAVSDVTDNLKVIAAYTLAKSEVQNGADKGNRLQLMPNQQASLWADYSWHSGVLDG
EEEEEEHHCCCCCEEEEEEEHHHHHHHHCCCCCCCEEEECCCCCCCEEECCCCCCCCCCC
FGIGAGARYTGNTYGDKANTWLGKADAYTVFDAAVHYDLGRLDNSLKGASLALNATNLLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEEEHHHHHC
KDYISTCDSFYCYYGDQRSVVASATYKW
HHHHHHCCCEEEEECCCCCEEEEEECCC
>Mature Secondary Structure 
SRSLDTLLRPSLLAVAIALCTPLASSQLIAAEQASSVRAYNLPAAPLSTTLNQIASQGG
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCEEEECCCCCHHHHHHHHHHHCCC
LTLSLNPSLAAGKTSAPVNGQYDAAGALRAALRGTGLQLEQSGAGTYTLVAVPEGVMALP
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCEECC
ETSVIGVENYESAWGPVEGYTATRTAAGTKTDTALVEAPRSISVATRQQMEDRGVHSLDD
CCEEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCHHHHH
AVRYMPGITASSYGSDTRADWLRVRGFEPTQFLDGLPLPKGVYANPKQETWNLDRLALLR
HHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC
GPASSVYGQTPPGGLLDMVSRRPSDVQSNEIQLQYGSDNHRQINFASTGKIDDAGQFLYG
CCHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHH
LSGVVRDSGTQIDHVDNKRYNIAPSLTWNIDDDTRFTLLTQFTRDDTGITSQFLPVQGTK
HHHHCCCCCCEEECCCCCCEEECCEEEEECCCCCEEEEEEEECCCCCCCCCEEEECCCCE
IDMPFGKVSHHKNLGDPDWEYYDRTYYALGYAFEHRLNDVWQFKQNLRYTKSDLSFQGIT
EECCCCHHHCCCCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
VGSYPFTQVDNDGNVGRTTTIVDEDISQFAVDNNFQADFATGDIRHTLLLGLDHQRSNTN
ECCCCCEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCEECCCCCEEEEEEECCCCCCCCC
YTSIFGSAPEINVNNPIHGQPIVRPARSTAFYDYNQKTYQTGLYVQDQMALDQWRLTLGG
EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCEEEHHHHHHHEEEEECC
REDWVHTSTQFINKGDATNTQRDKAFSGNAAISYVFDSGFVPYLSYAESFQPTTGADASS
CCCCEECHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCC
TESLKPTEGKQWELGIKYQPPGSKTLLTAAVYDLTQKNVSVSSFVNGVSITSQTGEVKVK
CCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHCCCCHHHHHCCEEEECCCCCEEEE
GLELEAVSDVTDNLKVIAAYTLAKSEVQNGADKGNRLQLMPNQQASLWADYSWHSGVLDG
EEEEEEHHCCCCCEEEEEEEHHHHHHHHCCCCCCCEEEECCCCCCCEEECCCCCCCCCCC
FGIGAGARYTGNTYGDKANTWLGKADAYTVFDAAVHYDLGRLDNSLKGASLALNATNLLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEEEHHHHHC
KDYISTCDSFYCYYGDQRSVVASATYKW
HHHHHHCCCEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]